RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 INTS5Q6P9B9 1019 aaKnown RBP18.26■□□□□ 0.51
HDLBP-229ENST00000460826 NGEFQ8N5V2 710 aa18.26■□□□□ 0.51
HDLBP-229ENST00000460826 GIGYF1O75420 1035 aaPredicted RBP18.25■□□□□ 0.51
HDLBP-229ENST00000460826 SNRPA1P09661 255 aaKnown RBP18.25■□□□□ 0.51
HDLBP-229ENST00000460826 SPINK5Q9NQ38 1064 aaPredicted RBP18.25■□□□□ 0.51
HDLBP-229ENST00000460826 C4AP0C0L4 1744 aa18.25■□□□□ 0.51
HDLBP-229ENST00000460826 IL16Q14005 1332 aa18.24■□□□□ 0.51
HDLBP-229ENST00000460826 HMGB2P26583 209 aaKnown RBP18.24■□□□□ 0.51
HDLBP-229ENST00000460826 WDR63Q8IWG1 891 aa18.24■□□□□ 0.51
HDLBP-229ENST00000460826 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
HDLBP-229ENST00000460826 TEX13AQ9BXU3 409 aaPredicted RBP18.24■□□□□ 0.51
HDLBP-229ENST00000460826 CCDC87Q9NVE4 849 aa18.24■□□□□ 0.51
HDLBP-229ENST00000460826 ZBTB1Q9Y2K1 713 aa18.24■□□□□ 0.51
HDLBP-229ENST00000460826 PHF14O94880 888 aa18.23■□□□□ 0.51
HDLBP-229ENST00000460826 COL23A1Q86Y22 540 aaPredicted RBP18.23■□□□□ 0.51
HDLBP-229ENST00000460826 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.22■□□□□ 0.51
HDLBP-229ENST00000460826 RPS6KA4O75676 772 aa18.22■□□□□ 0.51
HDLBP-229ENST00000460826 STARD3NLO95772 234 aa18.22■□□□□ 0.51
HDLBP-229ENST00000460826 A1BGP04217 495 aa18.22■□□□□ 0.51
HDLBP-229ENST00000460826 SSFA2P28290 1259 aa18.21■□□□□ 0.51
HDLBP-229ENST00000460826 PIP4K2AP48426 406 aaPredicted RBP18.21■□□□□ 0.51
HDLBP-229ENST00000460826 RTCBQ9Y3I0 505 aaKnown RBP18.21■□□□□ 0.51
HDLBP-229ENST00000460826 SOS1Q07889 1333 aaPredicted RBP18.21■□□□□ 0.51
HDLBP-229ENST00000460826 CANXP27824 592 aaKnown RBP18.2■□□□□ 0.5
HDLBP-229ENST00000460826 FANCIQ9NVI1 1328 aa18.2■□□□□ 0.5
HDLBP-229ENST00000460826 NBPF26B4DH59 902 aa18.19■□□□□ 0.5
HDLBP-229ENST00000460826 NBPF10Q6P3W6 841 aaKnown RBP18.19■□□□□ 0.5
HDLBP-229ENST00000460826 NBPF15Q8N660 670 aa18.19■□□□□ 0.5
HDLBP-229ENST00000460826 C8orf58Q8NAV2 365 aa18.19■□□□□ 0.5
HDLBP-229ENST00000460826 COL24A1Q17RW2 1714 aa18.18■□□□□ 0.5
HDLBP-229ENST00000460826 MSH5O43196 834 aa18.18■□□□□ 0.5
HDLBP-229ENST00000460826 ZBTB7AO95365 584 aa18.18■□□□□ 0.5
HDLBP-229ENST00000460826 HNRNPUQ00839 825 aaKnown RBP eCLIP18.18■□□□□ 0.5
HDLBP-229ENST00000460826 DUSP27Q5VZP5 1158 aa18.18■□□□□ 0.5
HDLBP-229ENST00000460826 FLAD1Q8NFF5 587 aa18.18■□□□□ 0.5
HDLBP-229ENST00000460826 ARHGEF1Q92888 912 aaKnown RBP18.18■□□□□ 0.5
HDLBP-229ENST00000460826 COL15A1P39059 1388 aa18.17■□□□□ 0.5
HDLBP-229ENST00000460826 ELL2O00472 640 aaPredicted RBP18.17■□□□□ 0.5
HDLBP-229ENST00000460826 EIF2S2P20042 333 aaKnown RBP18.17■□□□□ 0.5
HDLBP-229ENST00000460826 EIF5P55010 431 aaKnown RBP18.17■□□□□ 0.5
HDLBP-229ENST00000460826 TRAPPC3LQ5T215 181 aa18.17■□□□□ 0.5
HDLBP-229ENST00000460826 TSPYL6Q8N831 410 aa18.17■□□□□ 0.5
HDLBP-229ENST00000460826 NECTIN2Q92692 538 aa18.17■□□□□ 0.5
HDLBP-229ENST00000460826 ADRA2BP18089 450 aa18.16■□□□□ 0.5
HDLBP-229ENST00000460826 GOLGA2Q08379 1002 aa18.16■□□□□ 0.5
HDLBP-229ENST00000460826 CDCA7LQ96GN5 454 aa18.16■□□□□ 0.5
HDLBP-229ENST00000460826 IL6STP40189 918 aaPredicted RBP18.15■□□□□ 0.5
HDLBP-229ENST00000460826 SRP68Q9UHB9 627 aaKnown RBP18.15■□□□□ 0.5
HDLBP-229ENST00000460826 ATF5Q9Y2D1 282 aaPredicted RBP18.15■□□□□ 0.5
HDLBP-229ENST00000460826 ZNF330Q9Y3S2 320 aaPredicted RBP18.15■□□□□ 0.5
HDLBP-229ENST00000460826 HOXB7P09629 217 aa18.14■□□□□ 0.49
HDLBP-229ENST00000460826 SLFN5Q08AF3 891 aa18.14■□□□□ 0.49
HDLBP-229ENST00000460826 PDIA6Q15084 440 aa18.14■□□□□ 0.49
HDLBP-229ENST00000460826 PROSER3Q2NL68 480 aa18.14■□□□□ 0.49
HDLBP-229ENST00000460826 MSL1Q68DK7 614 aa18.14■□□□□ 0.49
HDLBP-229ENST00000460826 MYH16Q9H6N6 1097 aa18.14■□□□□ 0.49
HDLBP-229ENST00000460826 BCORQ6W2J9 1755 aa18.14■□□□□ 0.49
HDLBP-229ENST00000460826 SCN7AQ01118 1682 aa18.13■□□□□ 0.49
HDLBP-229ENST00000460826 ANXA1P04083 346 aa18.13■□□□□ 0.49
HDLBP-229ENST00000460826 RFC4P35249 363 aa18.13■□□□□ 0.49
HDLBP-229ENST00000460826 EXOSC9Q06265 439 aaKnown RBP18.13■□□□□ 0.49
HDLBP-229ENST00000460826 HDGFL1Q5TGJ6 251 aa18.13■□□□□ 0.49
HDLBP-229ENST00000460826 SLC16A10Q8TF71 515 aa18.13■□□□□ 0.49
HDLBP-229ENST00000460826 MTFR1LQ9H019 292 aa18.13■□□□□ 0.49
HDLBP-229ENST00000460826 USP42Q9H9J4 1324 aaKnown RBP18.13■□□□□ 0.49
HDLBP-229ENST00000460826 LRP5O75197 1615 aa18.12■□□□□ 0.49
HDLBP-229ENST00000460826 MYL6BP14649 208 aa18.12■□□□□ 0.49
HDLBP-229ENST00000460826 ERBB4Q15303 1308 aa18.12■□□□□ 0.49
HDLBP-229ENST00000460826 E9PSI1 815 aa18.11■□□□□ 0.49
HDLBP-229ENST00000460826 GYS1P13807 737 aa18.11■□□□□ 0.49
HDLBP-229ENST00000460826 TWISTNBQ3B726 338 aaPredicted RBP18.11■□□□□ 0.49
HDLBP-229ENST00000460826 USPL1Q5W0Q7 1092 aa18.11■□□□□ 0.49
HDLBP-229ENST00000460826 LRP10Q7Z4F1 713 aa18.11■□□□□ 0.49
HDLBP-229ENST00000460826 NARFQ9UHQ1 456 aa18.11■□□□□ 0.49
HDLBP-229ENST00000460826 TBC1D2BQ9UPU7 963 aa18.11■□□□□ 0.49
HDLBP-229ENST00000460826 SRCAPQ6ZRS2 3230 aa18.11■□□□□ 0.49
HDLBP-229ENST00000460826 PTGER2P43116 358 aa18.1■□□□□ 0.49
HDLBP-229ENST00000460826 TRMT2AQ8IZ69 625 aaKnown RBP18.1■□□□□ 0.49
HDLBP-229ENST00000460826 SGIP1Q9BQI5 828 aa18.1■□□□□ 0.49
HDLBP-229ENST00000460826 BCL2L12Q9HB09 334 aa18.1■□□□□ 0.49
HDLBP-229ENST00000460826 SPON1Q9HCB6 807 aa18.1■□□□□ 0.49
HDLBP-229ENST00000460826 CHPF2Q9P2E5 772 aa18.1■□□□□ 0.49
HDLBP-229ENST00000460826 NUP98P52948 1817 aa18.09■□□□□ 0.49
HDLBP-229ENST00000460826 A0A087WZG4 1122 aa18.09■□□□□ 0.49
HDLBP-229ENST00000460826 DZIP3Q86Y13 1208 aaKnown RBP18.09■□□□□ 0.49
HDLBP-229ENST00000460826 CACNA1FO60840 1977 aa18.08■□□□□ 0.49
HDLBP-229ENST00000460826 ZBED9Q6R2W3 1325 aa18.08■□□□□ 0.49
HDLBP-229ENST00000460826 TCERG1O14776 1098 aaKnown RBP18.08■□□□□ 0.48
HDLBP-229ENST00000460826 ZPR1O75312 459 aa18.08■□□□□ 0.48
HDLBP-229ENST00000460826 VAMP4O75379 141 aa18.08■□□□□ 0.48
HDLBP-229ENST00000460826 CAMTA2O94983 1202 aa18.08■□□□□ 0.48
HDLBP-229ENST00000460826 FKBP8Q14318 412 aa18.08■□□□□ 0.48
HDLBP-229ENST00000460826 TTLL7Q6ZT98 887 aa18.08■□□□□ 0.48
HDLBP-229ENST00000460826 ARXQ96QS3 562 aa18.08■□□□□ 0.48
HDLBP-229ENST00000460826 DDX21Q9NR30 783 aaKnown RBP eCLIP18.08■□□□□ 0.48
HDLBP-229ENST00000460826 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
HDLBP-229ENST00000460826 DBF4Q9UBU7 674 aaPredicted RBP18.06■□□□□ 0.48
HDLBP-229ENST00000460826 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
HDLBP-229ENST00000460826 CCDC30Q5VVM6 783 aa18.05■□□□□ 0.48
HDLBP-229ENST00000460826 XAGE3Q8WTP9 111 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms