RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 ARXQ96QS3 562 aa23.36■■□□□ 1.33
PLOD3-209ENST00000460475 BABAM1Q9NWV8 329 aa23.36■■□□□ 1.33
PLOD3-209ENST00000460475 MIS18AQ9NYP9 233 aa23.36■■□□□ 1.33
PLOD3-209ENST00000460475 NEUROD2Q15784 382 aa23.35■■□□□ 1.33
PLOD3-209ENST00000460475 C4AP0C0L4 1744 aa23.35■■□□□ 1.33
PLOD3-209ENST00000460475 SOS1Q07889 1333 aaPredicted RBP23.34■■□□□ 1.33
PLOD3-209ENST00000460475 APAF1O14727 1248 aa23.34■■□□□ 1.33
PLOD3-209ENST00000460475 SNRPA1P09661 255 aaKnown RBP23.34■■□□□ 1.33
PLOD3-209ENST00000460475 ZBTB1Q9Y2K1 713 aa23.34■■□□□ 1.33
PLOD3-209ENST00000460475 MSL1Q68DK7 614 aa23.33■■□□□ 1.33
PLOD3-209ENST00000460475 RFC4P35249 363 aa23.32■■□□□ 1.32
PLOD3-209ENST00000460475 USP16Q9Y5T5 823 aa23.32■■□□□ 1.32
PLOD3-209ENST00000460475 EIF4A1P60842 406 aaKnown RBP23.31■■□□□ 1.32
PLOD3-209ENST00000460475 GYS1P13807 737 aa23.3■■□□□ 1.32
PLOD3-209ENST00000460475 EIF5P55010 431 aaKnown RBP23.3■■□□□ 1.32
PLOD3-209ENST00000460475 NLGN1Q8N2Q7 840 aa23.3■■□□□ 1.32
PLOD3-209ENST00000460475 USP42Q9H9J4 1324 aaKnown RBP23.3■■□□□ 1.32
PLOD3-209ENST00000460475 PRAMEF22A3QJZ6 481 aa23.29■■□□□ 1.32
PLOD3-209ENST00000460475 CHL1O00533 1208 aa23.29■■□□□ 1.32
PLOD3-209ENST00000460475 FHDC1Q9C0D6 1143 aaPredicted RBP23.29■■□□□ 1.32
PLOD3-209ENST00000460475 COL15A1P39059 1388 aa23.28■■□□□ 1.32
PLOD3-209ENST00000460475 GIGYF1O75420 1035 aaPredicted RBP23.28■■□□□ 1.32
PLOD3-209ENST00000460475 CANXP27824 592 aaKnown RBP23.28■■□□□ 1.32
PLOD3-209ENST00000460475 IL6STP40189 918 aaPredicted RBP23.28■■□□□ 1.32
PLOD3-209ENST00000460475 SYT17Q9BSW7 474 aa23.28■■□□□ 1.32
PLOD3-209ENST00000460475 TSPYL4Q9UJ04 414 aa23.28■■□□□ 1.32
PLOD3-209ENST00000460475 A1BGP04217 495 aa23.27■■□□□ 1.32
PLOD3-209ENST00000460475 NCBP3Q53F19 620 aaKnown RBP23.27■■□□□ 1.32
PLOD3-209ENST00000460475 SRP68Q9UHB9 627 aaKnown RBP23.26■■□□□ 1.31
PLOD3-209ENST00000460475 NARFQ9UHQ1 456 aa23.26■■□□□ 1.31
PLOD3-209ENST00000460475 LAMB4A4D0S4 1761 aa23.26■■□□□ 1.31
PLOD3-209ENST00000460475 A0A087WZG4 1122 aa23.25■■□□□ 1.31
PLOD3-209ENST00000460475 ZPR1O75312 459 aa23.24■■□□□ 1.31
PLOD3-209ENST00000460475 CCDC27Q2M243 656 aa23.24■■□□□ 1.31
PLOD3-209ENST00000460475 CFAP44Q96MT7 982 aa23.24■■□□□ 1.31
PLOD3-209ENST00000460475 MMP10P09238 476 aa23.23■■□□□ 1.31
PLOD3-209ENST00000460475 ZNF853P0CG23 659 aa23.23■■□□□ 1.31
PLOD3-209ENST00000460475 CALD1Q05682 793 aaKnown RBP23.22■■□□□ 1.31
PLOD3-209ENST00000460475 FKBP8Q14318 412 aa23.22■■□□□ 1.31
PLOD3-209ENST00000460475 USPL1Q5W0Q7 1092 aa23.22■■□□□ 1.31
PLOD3-209ENST00000460475 NBPF26B4DH59 902 aa23.21■■□□□ 1.31
PLOD3-209ENST00000460475 NBPF10Q6P3W6 841 aaKnown RBP23.21■■□□□ 1.31
PLOD3-209ENST00000460475 NBPF15Q8N660 670 aa23.21■■□□□ 1.31
PLOD3-209ENST00000460475 BCL2L12Q9HB09 334 aa23.21■■□□□ 1.31
PLOD3-209ENST00000460475 CD2APQ9Y5K6 639 aa23.21■■□□□ 1.31
PLOD3-209ENST00000460475 TM4SF1P30408 202 aa23.2■■□□□ 1.3
PLOD3-209ENST00000460475 IFT57Q9NWB7 429 aa23.2■■□□□ 1.3
PLOD3-209ENST00000460475 CCER2I3L3R5 266 aa23.18■■□□□ 1.3
PLOD3-209ENST00000460475 PIP4K2AP48426 406 aaPredicted RBP23.18■■□□□ 1.3
PLOD3-209ENST00000460475 GNAI1P63096 354 aa23.18■■□□□ 1.3
PLOD3-209ENST00000460475 WWC1Q8IX03 1113 aa23.18■■□□□ 1.3
PLOD3-209ENST00000460475 FAM9BQ8IZU0 186 aa23.18■■□□□ 1.3
PLOD3-209ENST00000460475 LAS1LQ9Y4W2 734 aaKnown RBP23.18■■□□□ 1.3
PLOD3-209ENST00000460475 ERBB4Q15303 1308 aa23.17■■□□□ 1.3
PLOD3-209ENST00000460475 SCN7AQ01118 1682 aa23.17■■□□□ 1.3
PLOD3-209ENST00000460475 NPM2Q86SE8 214 aaKnown RBP23.17■■□□□ 1.3
PLOD3-209ENST00000460475 TBC1D2BQ9UPU7 963 aa23.17■■□□□ 1.3
PLOD3-209ENST00000460475 KIF13BQ9NQT8 1826 aa23.17■■□□□ 1.3
PLOD3-209ENST00000460475 MBIPQ9NS73 344 aa23.16■■□□□ 1.3
PLOD3-209ENST00000460475 ZNF330Q9Y3S2 320 aaPredicted RBP23.16■■□□□ 1.3
PLOD3-209ENST00000460475 PARP3Q9Y6F1 533 aa23.16■■□□□ 1.3
PLOD3-209ENST00000460475 RGL2O15211 777 aa23.15■■□□□ 1.3
PLOD3-209ENST00000460475 CAMTA2O94983 1202 aa23.15■■□□□ 1.3
PLOD3-209ENST00000460475 DDR1Q08345 913 aa23.15■■□□□ 1.3
PLOD3-209ENST00000460475 DZIP3Q86Y13 1208 aaKnown RBP23.15■■□□□ 1.3
PLOD3-209ENST00000460475 KLHL34Q8N239 644 aa23.15■■□□□ 1.3
PLOD3-209ENST00000460475 BCORQ6W2J9 1755 aa23.14■■□□□ 1.3
PLOD3-209ENST00000460475 POLRMTO00411 1230 aaKnown RBP23.14■■□□□ 1.29
PLOD3-209ENST00000460475 HOXB7P09629 217 aa23.14■■□□□ 1.29
PLOD3-209ENST00000460475 NFIXQ14938 502 aa23.14■■□□□ 1.29
PLOD3-209ENST00000460475 NGEFQ8N5V2 710 aa23.14■■□□□ 1.29
PLOD3-209ENST00000460475 NLGN2Q8NFZ4 835 aa23.14■■□□□ 1.29
PLOD3-209ENST00000460475 IL16Q14005 1332 aa23.13■■□□□ 1.29
PLOD3-209ENST00000460475 KRT24Q2M2I5 525 aa23.13■■□□□ 1.29
PLOD3-209ENST00000460475 PDIA6Q15084 440 aa23.12■■□□□ 1.29
PLOD3-209ENST00000460475 DIEXFQ68CQ4 756 aaKnown RBP23.12■■□□□ 1.29
PLOD3-209ENST00000460475 CLEC4GQ6UXB4 293 aa23.12■■□□□ 1.29
PLOD3-209ENST00000460475 C10orf71Q711Q0 1435 aa23.12■■□□□ 1.29
PLOD3-209ENST00000460475 GOLGB1Q14789 3259 aaKnown RBP23.11■■□□□ 1.29
PLOD3-209ENST00000460475 NRXN2Q9P2S2 1712 aa23.11■■□□□ 1.29
PLOD3-209ENST00000460475 AFDNP55196 1824 aaKnown RBP23.11■■□□□ 1.29
PLOD3-209ENST00000460475 LRP10Q7Z4F1 713 aa23.11■■□□□ 1.29
PLOD3-209ENST00000460475 UTRNP46939 3433 aa23.11■■□□□ 1.29
PLOD3-209ENST00000460475 SENP3-EIF4A1A0A087X0R7 540 aa23.1■■□□□ 1.29
PLOD3-209ENST00000460475 EIF2S2P20042 333 aaKnown RBP23.1■■□□□ 1.29
PLOD3-209ENST00000460475 TBC1D9BQ66K14 1250 aa23.09■■□□□ 1.29
PLOD3-209ENST00000460475 WDR63Q8IWG1 891 aa23.09■■□□□ 1.29
PLOD3-209ENST00000460475 DCAF8L1A6NGE4 600 aa23.08■■□□□ 1.29
PLOD3-209ENST00000460475 TGFB2P61812 414 aa23.08■■□□□ 1.29
PLOD3-209ENST00000460475 DUSP27Q5VZP5 1158 aa23.08■■□□□ 1.29
PLOD3-209ENST00000460475 KIAA1551Q9HCM1 1747 aa23.08■■□□□ 1.28
PLOD3-209ENST00000460475 ERVV-1B6SEH8 477 aa23.07■■□□□ 1.28
PLOD3-209ENST00000460475 SERPINB2P05120 415 aa23.07■■□□□ 1.28
PLOD3-209ENST00000460475 MYL6BP14649 208 aa23.07■■□□□ 1.28
PLOD3-209ENST00000460475 ZNF652Q9Y2D9 606 aa23.07■■□□□ 1.28
PLOD3-209ENST00000460475 DDX21Q9NR30 783 aaKnown RBP eCLIP23.06■■□□□ 1.28
PLOD3-209ENST00000460475 NUP98P52948 1817 aa23.05■■□□□ 1.28
PLOD3-209ENST00000460475 PROSER3Q2NL68 480 aa23.05■■□□□ 1.28
PLOD3-209ENST00000460475 HDGFL1Q5TGJ6 251 aa23.05■■□□□ 1.28
PLOD3-209ENST00000460475 BICDL1Q6ZP65 573 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms