RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 TTC13Q8NBP0 860 aa11.23□□□□□ -0.61
NPHP1-208ENST00000449600 BCL9O00512 1426 aa11.23□□□□□ -0.61
NPHP1-208ENST00000449600 SSH2Q76I76 1423 aa11.23□□□□□ -0.61
NPHP1-208ENST00000449600 PCNTO95613 3336 aa11.22□□□□□ -0.61
NPHP1-208ENST00000449600 CFAP70Q5T0N1 1121 aa11.22□□□□□ -0.61
NPHP1-208ENST00000449600 NKX2-3Q8TAU0 364 aa11.22□□□□□ -0.61
NPHP1-208ENST00000449600 KIAA0232Q92628 1395 aa11.22□□□□□ -0.61
NPHP1-208ENST00000449600 C14orf93Q9H972 538 aaKnown RBP11.22□□□□□ -0.61
NPHP1-208ENST00000449600 PARP4Q9UKK3 1724 aaKnown RBP11.22□□□□□ -0.61
NPHP1-208ENST00000449600 KNDC1Q76NI1 1749 aa11.21□□□□□ -0.61
NPHP1-208ENST00000449600 KIAA1210Q9ULL0 1709 aa11.21□□□□□ -0.61
NPHP1-208ENST00000449600 ANKARQ7Z5J8 1434 aa11.21□□□□□ -0.61
NPHP1-208ENST00000449600 DDX10Q13206 875 aaKnown RBP11.21□□□□□ -0.61
NPHP1-208ENST00000449600 TXNRD1Q16881 649 aa11.21□□□□□ -0.61
NPHP1-208ENST00000449600 POLR3GLQ9BT43 218 aa11.21□□□□□ -0.61
NPHP1-208ENST00000449600 STRN4Q9NRL3 753 aa11.21□□□□□ -0.61
NPHP1-208ENST00000449600 USP35Q9P2H5 1018 aa11.21□□□□□ -0.61
NPHP1-208ENST00000449600 PPLO60437 1756 aa11.21□□□□□ -0.62
NPHP1-208ENST00000449600 ATP7BP35670 1465 aa11.2□□□□□ -0.62
NPHP1-208ENST00000449600 ST20-MTHFSA0A0A6YYL1 179 aa11.2□□□□□ -0.62
NPHP1-208ENST00000449600 TMF1P82094 1093 aa11.2□□□□□ -0.62
NPHP1-208ENST00000449600 CDCA8Q53HL2 280 aa11.2□□□□□ -0.62
NPHP1-208ENST00000449600 IFT172Q9UG01 1749 aa11.2□□□□□ -0.62
NPHP1-208ENST00000449600 PIK3C2GO75747 1445 aa11.19□□□□□ -0.62
NPHP1-208ENST00000449600 RGPD8O14715 1765 aaPredicted RBP11.19□□□□□ -0.62
NPHP1-208ENST00000449600 YBX3P16989 372 aaKnown RBP eCLIP11.19□□□□□ -0.62
NPHP1-208ENST00000449600 PTF1AQ7RTS3 328 aa11.19□□□□□ -0.62
NPHP1-208ENST00000449600 SBF2Q86WG5 1849 aa11.19□□□□□ -0.62
NPHP1-208ENST00000449600 RNF40O75150 1001 aa11.18□□□□□ -0.62
NPHP1-208ENST00000449600 CHRNA2Q15822 529 aa11.18□□□□□ -0.62
NPHP1-208ENST00000449600 LARP1Q6PKG0 1096 aaKnown RBP11.18□□□□□ -0.62
NPHP1-208ENST00000449600 NPDC1Q9NQX5 325 aaPredicted RBP11.18□□□□□ -0.62
NPHP1-208ENST00000449600 STK26Q9P289 416 aa11.18□□□□□ -0.62
NPHP1-208ENST00000449600 CCDC7Q96M83 1385 aa11.17□□□□□ -0.62
NPHP1-208ENST00000449600 EVA1CP58658 441 aa11.17□□□□□ -0.62
NPHP1-208ENST00000449600 PMFBP1Q8TBY8 1022 aa11.17□□□□□ -0.62
NPHP1-208ENST00000449600 SLC16A10Q8TF71 515 aa11.17□□□□□ -0.62
NPHP1-208ENST00000449600 COL24A1Q17RW2 1714 aa11.17□□□□□ -0.62
NPHP1-208ENST00000449600 SWT1Q5T5J6 900 aaKnown RBP11.16□□□□□ -0.62
NPHP1-208ENST00000449600 NLGN2Q8NFZ4 835 aa11.16□□□□□ -0.62
NPHP1-208ENST00000449600 KLRG1Q96E93 195 aa11.16□□□□□ -0.62
NPHP1-208ENST00000449600 ANP32CO43423 234 aa11.15□□□□□ -0.62
NPHP1-208ENST00000449600 PADI6Q6TGC4 694 aa11.15□□□□□ -0.62
NPHP1-208ENST00000449600 TRAK1Q9UPV9 953 aa11.15□□□□□ -0.62
NPHP1-208ENST00000449600 PAPPAQ13219 1627 aa11.15□□□□□ -0.62
NPHP1-208ENST00000449600 YTHDC2Q9H6S0 1430 aaKnown RBP11.15□□□□□ -0.62
NPHP1-208ENST00000449600 KIF7Q2M1P5 1343 aa11.14□□□□□ -0.63
NPHP1-208ENST00000449600 WASHC2AQ641Q2 1341 aa11.14□□□□□ -0.63
NPHP1-208ENST00000449600 CENPJQ9HC77 1338 aaPredicted RBP11.14□□□□□ -0.63
NPHP1-208ENST00000449600 POLD1P28340 1107 aa11.14□□□□□ -0.63
NPHP1-208ENST00000449600 TMEM132EQ6IEE7 984 aa11.14□□□□□ -0.63
NPHP1-208ENST00000449600 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
NPHP1-208ENST00000449600 POGKQ9P215 609 aa11.14□□□□□ -0.63
NPHP1-208ENST00000449600 PDZRN3Q9UPQ7 1066 aa11.14□□□□□ -0.63
NPHP1-208ENST00000449600 CPDO75976 1380 aa11.14□□□□□ -0.63
NPHP1-208ENST00000449600 LMO7Q8WWI1 1683 aa11.14□□□□□ -0.63
NPHP1-208ENST00000449600 TOMM70O94826 608 aa11.13□□□□□ -0.63
NPHP1-208ENST00000449600 COPS2P61201 443 aa11.13□□□□□ -0.63
NPHP1-208ENST00000449600 WWC3Q9ULE0 1092 aa11.13□□□□□ -0.63
NPHP1-208ENST00000449600 LRRC37A3O60309 1634 aa11.13□□□□□ -0.63
NPHP1-208ENST00000449600 PHRF1Q9P1Y6 1649 aaKnown RBP11.13□□□□□ -0.63
NPHP1-208ENST00000449600 DDB1Q16531 1140 aa11.12□□□□□ -0.63
NPHP1-208ENST00000449600 SLF2Q8IX21 1173 aa11.12□□□□□ -0.63
NPHP1-208ENST00000449600 ZNF526Q8TF50 670 aaPredicted RBP11.12□□□□□ -0.63
NPHP1-208ENST00000449600 NECTIN2Q92692 538 aa11.12□□□□□ -0.63
NPHP1-208ENST00000449600 TMUB1Q9BVT8 246 aa11.12□□□□□ -0.63
NPHP1-208ENST00000449600 CRB1P82279 1406 aa11.11□□□□□ -0.63
NPHP1-208ENST00000449600 ZPR1O75312 459 aa11.11□□□□□ -0.63
NPHP1-208ENST00000449600 ZC3H6P61129 1189 aaKnown RBP11.11□□□□□ -0.63
NPHP1-208ENST00000449600 MARCH10Q8NA82 808 aaPredicted RBP11.11□□□□□ -0.63
NPHP1-208ENST00000449600 EYA1Q99502 592 aa11.11□□□□□ -0.63
NPHP1-208ENST00000449600 WDR90Q96KV7 1748 aa11.1□□□□□ -0.63
NPHP1-208ENST00000449600 TRIM67Q6ZTA4 783 aa11.1□□□□□ -0.63
NPHP1-208ENST00000449600 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
NPHP1-208ENST00000449600 TESK2Q96S53 571 aa11.1□□□□□ -0.63
NPHP1-208ENST00000449600 COL5A2P05997 1499 aaPredicted RBP11.1□□□□□ -0.63
NPHP1-208ENST00000449600 EVC2Q86UK5 1308 aa11.09□□□□□ -0.63
NPHP1-208ENST00000449600 GGCXP38435 758 aa11.09□□□□□ -0.63
NPHP1-208ENST00000449600 ZNF827Q17R98 1081 aa11.09□□□□□ -0.63
NPHP1-208ENST00000449600 TOPAZ1Q8N9V7 1692 aa11.08□□□□□ -0.64
NPHP1-208ENST00000449600 ADGRB1O14514 1584 aa11.08□□□□□ -0.64
NPHP1-208ENST00000449600 SBNO2Q9Y2G9 1366 aa11.08□□□□□ -0.64
NPHP1-208ENST00000449600 ZNF787Q6DD87 383 aa11.08□□□□□ -0.64
NPHP1-208ENST00000449600 CDCA7Q9BWT1 371 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-208ENST00000449600 WDR70Q9NW82 654 aa11.07□□□□□ -0.64
NPHP1-208ENST00000449600 TULP4Q9NRJ4 1543 aa11.07□□□□□ -0.64
NPHP1-208ENST00000449600 PRR36Q9H6K5 1346 aa11.07□□□□□ -0.64
NPHP1-208ENST00000449600 QSER1Q2KHR3 1735 aa11.06□□□□□ -0.64
NPHP1-208ENST00000449600 BRD4O60885 1362 aaPredicted RBP11.06□□□□□ -0.64
NPHP1-208ENST00000449600 PRAM1Q96QH2 718 aa11.06□□□□□ -0.64
NPHP1-208ENST00000449600 ARHGEF28Q8N1W1 1705 aaKnown RBP11.06□□□□□ -0.64
NPHP1-208ENST00000449600 SAFB2Q14151 953 aaKnown RBP eCLIP11.05□□□□□ -0.64
NPHP1-208ENST00000449600 NGDNQ8NEJ9 315 aaKnown RBP11.05□□□□□ -0.64
NPHP1-208ENST00000449600 PUS7Q96PZ0 661 aaKnown RBP11.05□□□□□ -0.64
NPHP1-208ENST00000449600 USP19O94966 1318 aa11.05□□□□□ -0.64
NPHP1-208ENST00000449600 RNF223E7ERA6 249 aa11.04□□□□□ -0.64
NPHP1-208ENST00000449600 RBM46Q8TBY0 533 aaKnown RBP11.04□□□□□ -0.64
NPHP1-208ENST00000449600 CD2APQ9Y5K6 639 aa11.04□□□□□ -0.64
NPHP1-208ENST00000449600 PNPLA7Q6ZV29 1317 aa11.04□□□□□ -0.64
NPHP1-208ENST00000449600 SRPK2P78362 688 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms