RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 KDM3BQ7LBC6 1761 aa26.46■■□□□ 1.83
TSSC4-206ENST00000440813 PRAMEF22A3QJZ6 481 aa26.45■■□□□ 1.82
TSSC4-206ENST00000440813 SNRPA1P09661 255 aaKnown RBP26.45■■□□□ 1.82
TSSC4-206ENST00000440813 CCER2I3L3R5 266 aa26.44■■□□□ 1.82
TSSC4-206ENST00000440813 ZBTB1Q9Y2K1 713 aa26.44■■□□□ 1.82
TSSC4-206ENST00000440813 CANXP27824 592 aaKnown RBP26.43■■□□□ 1.82
TSSC4-206ENST00000440813 EIF4A1P60842 406 aaKnown RBP26.43■■□□□ 1.82
TSSC4-206ENST00000440813 MSL1Q68DK7 614 aa26.43■■□□□ 1.82
TSSC4-206ENST00000440813 ARHGEF1Q92888 912 aaKnown RBP26.43■■□□□ 1.82
TSSC4-206ENST00000440813 USP16Q9Y5T5 823 aa26.43■■□□□ 1.82
TSSC4-206ENST00000440813 PTGER2P43116 358 aa26.42■■□□□ 1.82
TSSC4-206ENST00000440813 MIER1Q8N108 512 aa26.42■■□□□ 1.82
TSSC4-206ENST00000440813 BABAM1Q9NWV8 329 aa26.42■■□□□ 1.82
TSSC4-206ENST00000440813 ADRA2BP18089 450 aa26.41■■□□□ 1.82
TSSC4-206ENST00000440813 PPP1R1BQ9UD71 204 aaPredicted RBP26.41■■□□□ 1.82
TSSC4-206ENST00000440813 SALL2Q9Y467 1007 aaPredicted RBP26.41■■□□□ 1.82
TSSC4-206ENST00000440813 CHL1O00533 1208 aa26.4■■□□□ 1.82
TSSC4-206ENST00000440813 A1BGP04217 495 aa26.4■■□□□ 1.82
TSSC4-206ENST00000440813 RFC4P35249 363 aa26.4■■□□□ 1.82
TSSC4-206ENST00000440813 SGIP1Q9BQI5 828 aa26.39■■□□□ 1.82
TSSC4-206ENST00000440813 SOS1Q07889 1333 aaPredicted RBP26.39■■□□□ 1.81
TSSC4-206ENST00000440813 GIGYF1O75420 1035 aaPredicted RBP26.38■■□□□ 1.81
TSSC4-206ENST00000440813 CALD1Q05682 793 aaKnown RBP26.38■■□□□ 1.81
TSSC4-206ENST00000440813 POLD1P28340 1107 aa26.37■■□□□ 1.81
TSSC4-206ENST00000440813 CFAP44Q96MT7 982 aa26.37■■□□□ 1.81
TSSC4-206ENST00000440813 ZNF330Q9Y3S2 320 aaPredicted RBP26.37■■□□□ 1.81
TSSC4-206ENST00000440813 PIP4K2AP48426 406 aaPredicted RBP26.36■■□□□ 1.81
TSSC4-206ENST00000440813 CCDC27Q2M243 656 aa26.36■■□□□ 1.81
TSSC4-206ENST00000440813 WWC1Q8IX03 1113 aa26.36■■□□□ 1.81
TSSC4-206ENST00000440813 SRP68Q9UHB9 627 aaKnown RBP26.35■■□□□ 1.81
TSSC4-206ENST00000440813 COL15A1P39059 1388 aa26.34■■□□□ 1.81
TSSC4-206ENST00000440813 C4AP0C0L4 1744 aa26.34■■□□□ 1.81
TSSC4-206ENST00000440813 MBIPQ9NS73 344 aa26.34■■□□□ 1.81
TSSC4-206ENST00000440813 IFT57Q9NWB7 429 aa26.34■■□□□ 1.81
TSSC4-206ENST00000440813 ZNF853P0CG23 659 aa26.33■■□□□ 1.81
TSSC4-206ENST00000440813 EIF5P55010 431 aaKnown RBP26.33■■□□□ 1.81
TSSC4-206ENST00000440813 GNAI1P63096 354 aa26.33■■□□□ 1.81
TSSC4-206ENST00000440813 ARXQ96QS3 562 aa26.33■■□□□ 1.81
TSSC4-206ENST00000440813 COL24A1Q17RW2 1714 aa26.32■■□□□ 1.8
TSSC4-206ENST00000440813 GYS1P13807 737 aa26.32■■□□□ 1.8
TSSC4-206ENST00000440813 IL6STP40189 918 aaPredicted RBP26.32■■□□□ 1.8
TSSC4-206ENST00000440813 KRT24Q2M2I5 525 aa26.32■■□□□ 1.8
TSSC4-206ENST00000440813 NCBP3Q53F19 620 aaKnown RBP26.32■■□□□ 1.8
TSSC4-206ENST00000440813 USP42Q9H9J4 1324 aaKnown RBP26.32■■□□□ 1.8
TSSC4-206ENST00000440813 ZPR1O75312 459 aa26.31■■□□□ 1.8
TSSC4-206ENST00000440813 NPM2Q86SE8 214 aaKnown RBP26.31■■□□□ 1.8
TSSC4-206ENST00000440813 LAMB4A4D0S4 1761 aa26.3■■□□□ 1.8
TSSC4-206ENST00000440813 A0A087WZG4 1122 aa26.29■■□□□ 1.8
TSSC4-206ENST00000440813 NBPF26B4DH59 902 aa26.29■■□□□ 1.8
TSSC4-206ENST00000440813 EIF2S2P20042 333 aaKnown RBP26.29■■□□□ 1.8
TSSC4-206ENST00000440813 USPL1Q5W0Q7 1092 aa26.29■■□□□ 1.8
TSSC4-206ENST00000440813 NBPF10Q6P3W6 841 aaKnown RBP26.29■■□□□ 1.8
TSSC4-206ENST00000440813 NLGN1Q8N2Q7 840 aa26.29■■□□□ 1.8
TSSC4-206ENST00000440813 NBPF15Q8N660 670 aa26.29■■□□□ 1.8
TSSC4-206ENST00000440813 NARFQ9UHQ1 456 aa26.29■■□□□ 1.8
TSSC4-206ENST00000440813 TBC1D2BQ9UPU7 963 aa26.28■■□□□ 1.8
TSSC4-206ENST00000440813 KLHL34Q8N239 644 aa26.27■■□□□ 1.8
TSSC4-206ENST00000440813 MMP10P09238 476 aa26.26■■□□□ 1.79
TSSC4-206ENST00000440813 FKBP8Q14318 412 aa26.26■■□□□ 1.79
TSSC4-206ENST00000440813 NECTIN2Q92692 538 aa26.26■■□□□ 1.79
TSSC4-206ENST00000440813 NGEFQ8N5V2 710 aa26.25■■□□□ 1.79
TSSC4-206ENST00000440813 TSR2Q969E8 191 aaKnown RBP26.25■■□□□ 1.79
TSSC4-206ENST00000440813 FHDC1Q9C0D6 1143 aaPredicted RBP26.25■■□□□ 1.79
TSSC4-206ENST00000440813 IL16Q14005 1332 aa26.24■■□□□ 1.79
TSSC4-206ENST00000440813 MYL6BP14649 208 aa26.24■■□□□ 1.79
TSSC4-206ENST00000440813 DZIP3Q86Y13 1208 aaKnown RBP26.24■■□□□ 1.79
TSSC4-206ENST00000440813 WDR63Q8IWG1 891 aa26.24■■□□□ 1.79
TSSC4-206ENST00000440813 DUSP27Q5VZP5 1158 aa26.23■■□□□ 1.79
TSSC4-206ENST00000440813 BCL2L12Q9HB09 334 aa26.23■■□□□ 1.79
TSSC4-206ENST00000440813 ELL2O00472 640 aaPredicted RBP26.22■■□□□ 1.79
TSSC4-206ENST00000440813 C8orf58Q8NAV2 365 aa26.2■■□□□ 1.78
TSSC4-206ENST00000440813 SYT17Q9BSW7 474 aa26.2■■□□□ 1.78
TSSC4-206ENST00000440813 PARP3Q9Y6F1 533 aa26.2■■□□□ 1.78
TSSC4-206ENST00000440813 ERBB4Q15303 1308 aa26.19■■□□□ 1.78
TSSC4-206ENST00000440813 CAMTA2O94983 1202 aa26.19■■□□□ 1.78
TSSC4-206ENST00000440813 ANXA1P04083 346 aa26.19■■□□□ 1.78
TSSC4-206ENST00000440813 HOXB7P09629 217 aa26.19■■□□□ 1.78
TSSC4-206ENST00000440813 HDGFL1Q5TGJ6 251 aa26.19■■□□□ 1.78
TSSC4-206ENST00000440813 PDIA6Q15084 440 aa26.18■■□□□ 1.78
TSSC4-206ENST00000440813 PROSER3Q2NL68 480 aa26.18■■□□□ 1.78
TSSC4-206ENST00000440813 BICDL1Q6ZP65 573 aa26.18■■□□□ 1.78
TSSC4-206ENST00000440813 TM4SF1P30408 202 aa26.17■■□□□ 1.78
TSSC4-206ENST00000440813 DDR1Q08345 913 aa26.17■■□□□ 1.78
TSSC4-206ENST00000440813 NFIXQ14938 502 aa26.17■■□□□ 1.78
TSSC4-206ENST00000440813 SPINK5Q9NQ38 1064 aaPredicted RBP26.17■■□□□ 1.78
TSSC4-206ENST00000440813 SCN7AQ01118 1682 aa26.15■■□□□ 1.78
TSSC4-206ENST00000440813 FANCIQ9NVI1 1328 aa26.15■■□□□ 1.78
TSSC4-206ENST00000440813 TBC1D9BQ66K14 1250 aa26.15■■□□□ 1.78
TSSC4-206ENST00000440813 TTLL7Q6ZT98 887 aa26.15■■□□□ 1.78
TSSC4-206ENST00000440813 TSPYL6Q8N831 410 aa26.15■■□□□ 1.78
TSSC4-206ENST00000440813 CHPF2Q9P2E5 772 aa26.15■■□□□ 1.78
TSSC4-206ENST00000440813 ZNF521Q96K83 1311 aa26.14■■□□□ 1.78
TSSC4-206ENST00000440813 POLRMTO00411 1230 aaKnown RBP26.14■■□□□ 1.78
TSSC4-206ENST00000440813 DDX21Q9NR30 783 aaKnown RBP eCLIP26.14■■□□□ 1.78
TSSC4-206ENST00000440813 KIF6Q6ZMV9 814 aa26.13■■□□□ 1.77
TSSC4-206ENST00000440813 LRP10Q7Z4F1 713 aa26.13■■□□□ 1.77
TSSC4-206ENST00000440813 BCORQ6W2J9 1755 aa26.12■■□□□ 1.77
TSSC4-206ENST00000440813 GOLGA2Q08379 1002 aa26.12■■□□□ 1.77
TSSC4-206ENST00000440813 NLGN2Q8NFZ4 835 aa26.12■■□□□ 1.77
TSSC4-206ENST00000440813 MYH16Q9H6N6 1097 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms