RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 SLC16A10Q8TF71 515 aa13.62□□□□□ -0.23
HDLBP-206ENST00000417540 RRP7AQ9Y3A4 280 aaKnown RBP13.62□□□□□ -0.23
HDLBP-206ENST00000417540 USP42Q9H9J4 1324 aaKnown RBP13.62□□□□□ -0.23
HDLBP-206ENST00000417540 CARMIL3Q8ND23 1372 aa13.61□□□□□ -0.23
HDLBP-206ENST00000417540 SENP3-EIF4A1A0A087X0R7 540 aa13.61□□□□□ -0.23
HDLBP-206ENST00000417540 GYS1P13807 737 aa13.61□□□□□ -0.23
HDLBP-206ENST00000417540 NFE2L2Q16236 605 aa13.61□□□□□ -0.23
HDLBP-206ENST00000417540 ZNF790Q6PG37 636 aa13.61□□□□□ -0.23
HDLBP-206ENST00000417540 ARHGEF1Q92888 912 aaKnown RBP13.61□□□□□ -0.23
HDLBP-206ENST00000417540 RTCBQ9Y3I0 505 aaKnown RBP13.61□□□□□ -0.23
HDLBP-206ENST00000417540 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
HDLBP-206ENST00000417540 DDR1Q08345 913 aa13.6□□□□□ -0.23
HDLBP-206ENST00000417540 CCDC87Q9NVE4 849 aa13.6□□□□□ -0.23
HDLBP-206ENST00000417540 MIS18AQ9NYP9 233 aa13.6□□□□□ -0.23
HDLBP-206ENST00000417540 ANKRD36CQ5JPF3 1778 aa13.6□□□□□ -0.23
HDLBP-206ENST00000417540 BTBD11A6QL63 1104 aa13.59□□□□□ -0.23
HDLBP-206ENST00000417540 RPS6KA4O75676 772 aa13.59□□□□□ -0.23
HDLBP-206ENST00000417540 MMP10P09238 476 aa13.59□□□□□ -0.23
HDLBP-206ENST00000417540 FKBP8Q14318 412 aa13.59□□□□□ -0.23
HDLBP-206ENST00000417540 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
HDLBP-206ENST00000417540 ARFGEF1Q9Y6D6 1849 aa13.59□□□□□ -0.23
HDLBP-206ENST00000417540 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-206ENST00000417540 YBX3P16989 372 aaKnown RBP eCLIP13.58□□□□□ -0.24
HDLBP-206ENST00000417540 RC3H1Q5TC82 1133 aaKnown RBP13.58□□□□□ -0.24
HDLBP-206ENST00000417540 NUP98P52948 1817 aa13.57□□□□□ -0.24
HDLBP-206ENST00000417540 CANXP27824 592 aaKnown RBP13.57□□□□□ -0.24
HDLBP-206ENST00000417540 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
HDLBP-206ENST00000417540 FLAD1Q8NFF5 587 aa13.57□□□□□ -0.24
HDLBP-206ENST00000417540 BCL2L12Q9HB09 334 aa13.57□□□□□ -0.24
HDLBP-206ENST00000417540 ARFGEF2Q9Y6D5 1785 aa13.56□□□□□ -0.24
HDLBP-206ENST00000417540 C1QTNF8P60827 252 aa13.56□□□□□ -0.24
HDLBP-206ENST00000417540 TRAPPC3LQ5T215 181 aa13.56□□□□□ -0.24
HDLBP-206ENST00000417540 USPL1Q5W0Q7 1092 aa13.56□□□□□ -0.24
HDLBP-206ENST00000417540 RTF1Q92541 710 aaKnown RBP13.56□□□□□ -0.24
HDLBP-206ENST00000417540 ZNF330Q9Y3S2 320 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-206ENST00000417540 A1BGP04217 495 aa13.55□□□□□ -0.24
HDLBP-206ENST00000417540 ADRA2BP18089 450 aa13.55□□□□□ -0.24
HDLBP-206ENST00000417540 RFC4P35249 363 aa13.55□□□□□ -0.24
HDLBP-206ENST00000417540 FMNL2Q96PY5 1086 aa13.55□□□□□ -0.24
HDLBP-206ENST00000417540 TIAM2Q8IVF5 1701 aa13.54□□□□□ -0.24
HDLBP-206ENST00000417540 TMPOP42166 694 aaKnown RBP13.54□□□□□ -0.24
HDLBP-206ENST00000417540 WDR43Q15061 677 aaKnown RBP eCLIP13.54□□□□□ -0.24
HDLBP-206ENST00000417540 VSIG10Q8N0Z9 540 aa13.54□□□□□ -0.24
HDLBP-206ENST00000417540 ADAMTS8Q9UP79 889 aa13.54□□□□□ -0.24
HDLBP-206ENST00000417540 USP16Q9Y5T5 823 aa13.54□□□□□ -0.24
HDLBP-206ENST00000417540 NEUROD2Q15784 382 aa13.53□□□□□ -0.24
HDLBP-206ENST00000417540 KRT24Q2M2I5 525 aa13.53□□□□□ -0.24
HDLBP-206ENST00000417540 LAMB2P55268 1798 aa13.53□□□□□ -0.24
HDLBP-206ENST00000417540 NBPF26B4DH59 902 aa13.52□□□□□ -0.25
HDLBP-206ENST00000417540 POLRMTO00411 1230 aaKnown RBP13.52□□□□□ -0.25
HDLBP-206ENST00000417540 EIF5P55010 431 aaKnown RBP13.52□□□□□ -0.25
HDLBP-206ENST00000417540 RIPK4P57078 832 aa13.52□□□□□ -0.25
HDLBP-206ENST00000417540 NBPF10Q6P3W6 841 aaKnown RBP13.52□□□□□ -0.25
HDLBP-206ENST00000417540 NBPF15Q8N660 670 aa13.52□□□□□ -0.25
HDLBP-206ENST00000417540 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
HDLBP-206ENST00000417540 NFIXQ14938 502 aa13.51□□□□□ -0.25
HDLBP-206ENST00000417540 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
HDLBP-206ENST00000417540 CAMTA2O94983 1202 aa13.5□□□□□ -0.25
HDLBP-206ENST00000417540 EIF4A1P60842 406 aaKnown RBP13.5□□□□□ -0.25
HDLBP-206ENST00000417540 CCDC24Q8N4L8 307 aa13.5□□□□□ -0.25
HDLBP-206ENST00000417540 NARFQ9UHQ1 456 aa13.5□□□□□ -0.25
HDLBP-206ENST00000417540 TBC1D2BQ9UPU7 963 aa13.5□□□□□ -0.25
HDLBP-206ENST00000417540 NEFMP07197 916 aa13.49□□□□□ -0.25
HDLBP-206ENST00000417540 TAF7Q15545 349 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-206ENST00000417540 TBC1D9BQ66K14 1250 aa13.49□□□□□ -0.25
HDLBP-206ENST00000417540 BICDL1Q6ZP65 573 aa13.49□□□□□ -0.25
HDLBP-206ENST00000417540 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
HDLBP-206ENST00000417540 TSPYL4Q9UJ04 414 aa13.49□□□□□ -0.25
HDLBP-206ENST00000417540 CD2APQ9Y5K6 639 aa13.49□□□□□ -0.25
HDLBP-206ENST00000417540 ABCC12Q96J65 1359 aa13.48□□□□□ -0.25
HDLBP-206ENST00000417540 CEP350Q5VT06 3117 aa13.48□□□□□ -0.25
HDLBP-206ENST00000417540 ANXA1P04083 346 aa13.48□□□□□ -0.25
HDLBP-206ENST00000417540 GPR162Q16538 588 aa13.48□□□□□ -0.25
HDLBP-206ENST00000417540 PROSER3Q2NL68 480 aa13.48□□□□□ -0.25
HDLBP-206ENST00000417540 DDX60Q8IY21 1712 aaKnown RBP13.47□□□□□ -0.25
HDLBP-206ENST00000417540 SBF1O95248 1867 aa13.47□□□□□ -0.25
HDLBP-206ENST00000417540 APAF1O14727 1248 aa13.47□□□□□ -0.25
HDLBP-206ENST00000417540 ZPR1O75312 459 aa13.47□□□□□ -0.25
HDLBP-206ENST00000417540 STARD3NLO95772 234 aa13.47□□□□□ -0.25
HDLBP-206ENST00000417540 SNRPA1P09661 255 aaKnown RBP13.47□□□□□ -0.25
HDLBP-206ENST00000417540 DPEP1P16444 411 aa13.47□□□□□ -0.25
HDLBP-206ENST00000417540 CHRNA5P30532 468 aa13.47□□□□□ -0.25
HDLBP-206ENST00000417540 IL6STP40189 918 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-206ENST00000417540 IFFO2Q5TF58 517 aa13.47□□□□□ -0.25
HDLBP-206ENST00000417540 PARP3Q9Y6F1 533 aa13.47□□□□□ -0.25
HDLBP-206ENST00000417540 COL4A1P02462 1669 aa13.47□□□□□ -0.25
HDLBP-206ENST00000417540 ADCY9O60503 1353 aa13.46□□□□□ -0.25
HDLBP-206ENST00000417540 CCDC88AQ3V6T2 1871 aa13.46□□□□□ -0.25
HDLBP-206ENST00000417540 SLX4Q8IY92 1834 aa13.46□□□□□ -0.25
HDLBP-206ENST00000417540 A0A0G2JLW4 131 aa13.46□□□□□ -0.25
HDLBP-206ENST00000417540 GIGYF1O75420 1035 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-206ENST00000417540 TM4SF1P30408 202 aa13.46□□□□□ -0.25
HDLBP-206ENST00000417540 DZIP3Q86Y13 1208 aaKnown RBP13.46□□□□□ -0.25
HDLBP-206ENST00000417540 NLGN1Q8N2Q7 840 aa13.46□□□□□ -0.25
HDLBP-206ENST00000417540 NECTIN2Q92692 538 aa13.46□□□□□ -0.25
HDLBP-206ENST00000417540 MRS2Q9HD23 443 aa13.46□□□□□ -0.25
HDLBP-206ENST00000417540 TTLL7Q6ZT98 887 aa13.45□□□□□ -0.26
HDLBP-206ENST00000417540 SLC51AQ86UW1 340 aa13.45□□□□□ -0.26
HDLBP-206ENST00000417540 FER1L6Q2WGJ9 1857 aa13.44□□□□□ -0.26
HDLBP-206ENST00000417540 KCNA3P22001 575 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms