RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 SPON1Q9HCB6 807 aa31.2■■■□□ 2.58
UBE2E3-202ENST00000410062 SNRPA1P09661 255 aaKnown RBP31.19■■■□□ 2.58
UBE2E3-202ENST00000410062 EIF4A1P60842 406 aaKnown RBP31.19■■■□□ 2.58
UBE2E3-202ENST00000410062 SLC16A10Q8TF71 515 aa31.18■■■□□ 2.58
UBE2E3-202ENST00000410062 BABAM1Q9NWV8 329 aa31.18■■■□□ 2.58
UBE2E3-202ENST00000410062 LRP5O75197 1615 aa31.18■■■□□ 2.58
UBE2E3-202ENST00000410062 TRAPPC3LQ5T215 181 aa31.17■■■□□ 2.58
UBE2E3-202ENST00000410062 ZBTB1Q9Y2K1 713 aa31.17■■■□□ 2.58
UBE2E3-202ENST00000410062 SALL2Q9Y467 1007 aaPredicted RBP31.17■■■□□ 2.58
UBE2E3-202ENST00000410062 USP16Q9Y5T5 823 aa31.17■■■□□ 2.58
UBE2E3-202ENST00000410062 CHL1O00533 1208 aa31.17■■■□□ 2.58
UBE2E3-202ENST00000410062 ARHGEF1Q92888 912 aaKnown RBP31.15■■■□□ 2.58
UBE2E3-202ENST00000410062 CANXP27824 592 aaKnown RBP31.14■■■□□ 2.58
UBE2E3-202ENST00000410062 CCDC27Q2M243 656 aa31.14■■■□□ 2.58
UBE2E3-202ENST00000410062 A1BGP04217 495 aa31.13■■■□□ 2.57
UBE2E3-202ENST00000410062 ADRA2BP18089 450 aa31.13■■■□□ 2.57
UBE2E3-202ENST00000410062 WWC1Q8IX03 1113 aa31.13■■■□□ 2.57
UBE2E3-202ENST00000410062 CFAP44Q96MT7 982 aa31.13■■■□□ 2.57
UBE2E3-202ENST00000410062 GIGYF1O75420 1035 aaPredicted RBP31.13■■■□□ 2.57
UBE2E3-202ENST00000410062 PTGER2P43116 358 aa31.13■■■□□ 2.57
UBE2E3-202ENST00000410062 CALD1Q05682 793 aaKnown RBP31.13■■■□□ 2.57
UBE2E3-202ENST00000410062 MSL1Q68DK7 614 aa31.13■■■□□ 2.57
UBE2E3-202ENST00000410062 SOS1Q07889 1333 aaPredicted RBP31.12■■■□□ 2.57
UBE2E3-202ENST00000410062 C4AP0C0L4 1744 aa31.11■■■□□ 2.57
UBE2E3-202ENST00000410062 ZNF853P0CG23 659 aa31.1■■■□□ 2.57
UBE2E3-202ENST00000410062 RFC4P35249 363 aa31.1■■■□□ 2.57
UBE2E3-202ENST00000410062 NCBP3Q53F19 620 aaKnown RBP31.1■■■□□ 2.57
UBE2E3-202ENST00000410062 SGIP1Q9BQI5 828 aa31.09■■■□□ 2.57
UBE2E3-202ENST00000410062 MBIPQ9NS73 344 aa31.09■■■□□ 2.57
UBE2E3-202ENST00000410062 IFT57Q9NWB7 429 aa31.09■■■□□ 2.57
UBE2E3-202ENST00000410062 LAMB4A4D0S4 1761 aa31.09■■■□□ 2.57
UBE2E3-202ENST00000410062 PIP4K2AP48426 406 aaPredicted RBP31.09■■■□□ 2.57
UBE2E3-202ENST00000410062 GNAI1P63096 354 aa31.08■■■□□ 2.57
UBE2E3-202ENST00000410062 KRT24Q2M2I5 525 aa31.08■■■□□ 2.57
UBE2E3-202ENST00000410062 ZNF330Q9Y3S2 320 aaPredicted RBP31.07■■■□□ 2.56
UBE2E3-202ENST00000410062 COL15A1P39059 1388 aa31.07■■■□□ 2.56
UBE2E3-202ENST00000410062 COL24A1Q17RW2 1714 aa31.07■■■□□ 2.56
UBE2E3-202ENST00000410062 SRP68Q9UHB9 627 aaKnown RBP31.06■■■□□ 2.56
UBE2E3-202ENST00000410062 EIF5P55010 431 aaKnown RBP31.05■■■□□ 2.56
UBE2E3-202ENST00000410062 PPP1R1BQ9UD71 204 aaPredicted RBP31.05■■■□□ 2.56
UBE2E3-202ENST00000410062 IL6STP40189 918 aaPredicted RBP31.04■■■□□ 2.56
UBE2E3-202ENST00000410062 POLD1P28340 1107 aa31.03■■■□□ 2.56
UBE2E3-202ENST00000410062 USP42Q9H9J4 1324 aaKnown RBP31.03■■■□□ 2.56
UBE2E3-202ENST00000410062 NBPF26B4DH59 902 aa31.02■■■□□ 2.56
UBE2E3-202ENST00000410062 GYS1P13807 737 aa31.02■■■□□ 2.56
UBE2E3-202ENST00000410062 NBPF10Q6P3W6 841 aaKnown RBP31.02■■■□□ 2.56
UBE2E3-202ENST00000410062 NBPF15Q8N660 670 aa31.02■■■□□ 2.56
UBE2E3-202ENST00000410062 EIF2S2P20042 333 aaKnown RBP31■■■□□ 2.55
UBE2E3-202ENST00000410062 NGEFQ8N5V2 710 aa31■■■□□ 2.55
UBE2E3-202ENST00000410062 ZPR1O75312 459 aa31■■■□□ 2.55
UBE2E3-202ENST00000410062 USPL1Q5W0Q7 1092 aa31■■■□□ 2.55
UBE2E3-202ENST00000410062 TSR2Q969E8 191 aaKnown RBP31■■■□□ 2.55
UBE2E3-202ENST00000410062 WDR63Q8IWG1 891 aa30.99■■■□□ 2.55
UBE2E3-202ENST00000410062 ARXQ96QS3 562 aa30.99■■■□□ 2.55
UBE2E3-202ENST00000410062 NARFQ9UHQ1 456 aa30.99■■■□□ 2.55
UBE2E3-202ENST00000410062 IL16Q14005 1332 aa30.99■■■□□ 2.55
UBE2E3-202ENST00000410062 NPM2Q86SE8 214 aaKnown RBP30.98■■■□□ 2.55
UBE2E3-202ENST00000410062 TBC1D2BQ9UPU7 963 aa30.98■■■□□ 2.55
UBE2E3-202ENST00000410062 A0A087WZG4 1122 aa30.97■■■□□ 2.55
UBE2E3-202ENST00000410062 NECTIN2Q92692 538 aa30.97■■■□□ 2.55
UBE2E3-202ENST00000410062 FKBP8Q14318 412 aa30.96■■■□□ 2.55
UBE2E3-202ENST00000410062 NLGN1Q8N2Q7 840 aa30.96■■■□□ 2.55
UBE2E3-202ENST00000410062 DUSP27Q5VZP5 1158 aa30.96■■■□□ 2.55
UBE2E3-202ENST00000410062 ELL2O00472 640 aaPredicted RBP30.94■■■□□ 2.54
UBE2E3-202ENST00000410062 MYL6BP14649 208 aa30.94■■■□□ 2.54
UBE2E3-202ENST00000410062 MMP10P09238 476 aa30.93■■■□□ 2.54
UBE2E3-202ENST00000410062 C8orf58Q8NAV2 365 aa30.93■■■□□ 2.54
UBE2E3-202ENST00000410062 BCL2L12Q9HB09 334 aa30.93■■■□□ 2.54
UBE2E3-202ENST00000410062 SPINK5Q9NQ38 1064 aaPredicted RBP30.93■■■□□ 2.54
UBE2E3-202ENST00000410062 DZIP3Q86Y13 1208 aaKnown RBP30.92■■■□□ 2.54
UBE2E3-202ENST00000410062 ZNF521Q96K83 1311 aa30.92■■■□□ 2.54
UBE2E3-202ENST00000410062 HOXB7P09629 217 aa30.92■■■□□ 2.54
UBE2E3-202ENST00000410062 ERBB4Q15303 1308 aa30.91■■■□□ 2.54
UBE2E3-202ENST00000410062 PDIA6Q15084 440 aa30.91■■■□□ 2.54
UBE2E3-202ENST00000410062 FHDC1Q9C0D6 1143 aaPredicted RBP30.91■■■□□ 2.54
UBE2E3-202ENST00000410062 FANCIQ9NVI1 1328 aa30.9■■■□□ 2.54
UBE2E3-202ENST00000410062 ANXA1P04083 346 aa30.9■■■□□ 2.54
UBE2E3-202ENST00000410062 HDGFL1Q5TGJ6 251 aa30.9■■■□□ 2.54
UBE2E3-202ENST00000410062 KLHL34Q8N239 644 aa30.9■■■□□ 2.54
UBE2E3-202ENST00000410062 CAMTA2O94983 1202 aa30.89■■■□□ 2.54
UBE2E3-202ENST00000410062 PROSER3Q2NL68 480 aa30.89■■■□□ 2.54
UBE2E3-202ENST00000410062 TSPYL6Q8N831 410 aa30.89■■■□□ 2.54
UBE2E3-202ENST00000410062 SCN7AQ01118 1682 aa30.89■■■□□ 2.54
UBE2E3-202ENST00000410062 BCORQ6W2J9 1755 aa30.87■■■□□ 2.53
UBE2E3-202ENST00000410062 LRP10Q7Z4F1 713 aa30.86■■■□□ 2.53
UBE2E3-202ENST00000410062 CHPF2Q9P2E5 772 aa30.86■■■□□ 2.53
UBE2E3-202ENST00000410062 TM4SF1P30408 202 aa30.85■■■□□ 2.53
UBE2E3-202ENST00000410062 DDR1Q08345 913 aa30.84■■■□□ 2.53
UBE2E3-202ENST00000410062 NFIXQ14938 502 aa30.84■■■□□ 2.53
UBE2E3-202ENST00000410062 TTLL7Q6ZT98 887 aa30.84■■■□□ 2.53
UBE2E3-202ENST00000410062 SYT17Q9BSW7 474 aa30.84■■■□□ 2.53
UBE2E3-202ENST00000410062 DDX21Q9NR30 783 aaKnown RBP eCLIP30.84■■■□□ 2.53
UBE2E3-202ENST00000410062 PARP3Q9Y6F1 533 aa30.84■■■□□ 2.53
UBE2E3-202ENST00000410062 GOLGA2Q08379 1002 aa30.83■■■□□ 2.53
UBE2E3-202ENST00000410062 BICDL1Q6ZP65 573 aa30.83■■■□□ 2.53
UBE2E3-202ENST00000410062 MYH16Q9H6N6 1097 aa30.83■■■□□ 2.53
UBE2E3-202ENST00000410062 TBC1D9BQ66K14 1250 aa30.83■■■□□ 2.53
UBE2E3-202ENST00000410062 POLRMTO00411 1230 aaKnown RBP30.81■■■□□ 2.52
UBE2E3-202ENST00000410062 TWISTNBQ3B726 338 aaPredicted RBP30.81■■■□□ 2.52
UBE2E3-202ENST00000410062 DBF4Q9UBU7 674 aaPredicted RBP30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms