RNA–Protein interactions for RNA: ENST00000407404.5

NR1H3-204, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5 BASIC

Gene NR1H3, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-204ENST00000407404 PPP1R1BQ9UD71 204 aaPredicted RBP21.9■■□□□ 1.1
NR1H3-204ENST00000407404 TSPYL4Q9UJ04 414 aa21.9■■□□□ 1.1
NR1H3-204ENST00000407404 DIEXFQ68CQ4 756 aaKnown RBP21.89■■□□□ 1.1
NR1H3-204ENST00000407404 ARHGEF1Q92888 912 aaKnown RBP21.89■■□□□ 1.1
NR1H3-204ENST00000407404 SGIP1Q9BQI5 828 aa21.89■■□□□ 1.1
NR1H3-204ENST00000407404 COL24A1Q17RW2 1714 aa21.88■■□□□ 1.09
NR1H3-204ENST00000407404 POLD1P28340 1107 aa21.88■■□□□ 1.09
NR1H3-204ENST00000407404 ZBTB1Q9Y2K1 713 aa21.88■■□□□ 1.09
NR1H3-204ENST00000407404 RFC4P35249 363 aa21.87■■□□□ 1.09
NR1H3-204ENST00000407404 EIF4A1P60842 406 aaKnown RBP21.87■■□□□ 1.09
NR1H3-204ENST00000407404 MSL1Q68DK7 614 aa21.87■■□□□ 1.09
NR1H3-204ENST00000407404 USP16Q9Y5T5 823 aa21.87■■□□□ 1.09
NR1H3-204ENST00000407404 PRAMEF22A3QJZ6 481 aa21.86■■□□□ 1.09
NR1H3-204ENST00000407404 CANXP27824 592 aaKnown RBP21.86■■□□□ 1.09
NR1H3-204ENST00000407404 LAS1LQ9Y4W2 734 aaKnown RBP21.86■■□□□ 1.09
NR1H3-204ENST00000407404 SOS1Q07889 1333 aaPredicted RBP21.86■■□□□ 1.09
NR1H3-204ENST00000407404 CCER2I3L3R5 266 aa21.85■■□□□ 1.09
NR1H3-204ENST00000407404 CALD1Q05682 793 aaKnown RBP21.85■■□□□ 1.09
NR1H3-204ENST00000407404 C4AP0C0L4 1744 aa21.85■■□□□ 1.09
NR1H3-204ENST00000407404 CHL1O00533 1208 aa21.84■■□□□ 1.09
NR1H3-204ENST00000407404 SENP3-EIF4A1A0A087X0R7 540 aa21.83■■□□□ 1.09
NR1H3-204ENST00000407404 GIGYF1O75420 1035 aaPredicted RBP21.83■■□□□ 1.09
NR1H3-204ENST00000407404 A1BGP04217 495 aa21.83■■□□□ 1.09
NR1H3-204ENST00000407404 ARXQ96QS3 562 aa21.83■■□□□ 1.09
NR1H3-204ENST00000407404 COL15A1P39059 1388 aa21.83■■□□□ 1.08
NR1H3-204ENST00000407404 CCDC27Q2M243 656 aa21.82■■□□□ 1.08
NR1H3-204ENST00000407404 NCBP3Q53F19 620 aaKnown RBP21.82■■□□□ 1.08
NR1H3-204ENST00000407404 CFAP44Q96MT7 982 aa21.82■■□□□ 1.08
NR1H3-204ENST00000407404 LAMB4A4D0S4 1761 aa21.82■■□□□ 1.08
NR1H3-204ENST00000407404 IL6STP40189 918 aaPredicted RBP21.81■■□□□ 1.08
NR1H3-204ENST00000407404 EIF5P55010 431 aaKnown RBP21.81■■□□□ 1.08
NR1H3-204ENST00000407404 USP42Q9H9J4 1324 aaKnown RBP21.81■■□□□ 1.08
NR1H3-204ENST00000407404 NPM2Q86SE8 214 aaKnown RBP21.8■■□□□ 1.08
NR1H3-204ENST00000407404 NLGN1Q8N2Q7 840 aa21.8■■□□□ 1.08
NR1H3-204ENST00000407404 A0A087WZG4 1122 aa21.8■■□□□ 1.08
NR1H3-204ENST00000407404 ZPR1O75312 459 aa21.8■■□□□ 1.08
NR1H3-204ENST00000407404 GYS1P13807 737 aa21.8■■□□□ 1.08
NR1H3-204ENST00000407404 GNAI1P63096 354 aa21.8■■□□□ 1.08
NR1H3-204ENST00000407404 IFT57Q9NWB7 429 aa21.8■■□□□ 1.08
NR1H3-204ENST00000407404 SRP68Q9UHB9 627 aaKnown RBP21.8■■□□□ 1.08
NR1H3-204ENST00000407404 ZNF330Q9Y3S2 320 aaPredicted RBP21.8■■□□□ 1.08
NR1H3-204ENST00000407404 ZNF853P0CG23 659 aa21.79■■□□□ 1.08
NR1H3-204ENST00000407404 WWC1Q8IX03 1113 aa21.79■■□□□ 1.08
NR1H3-204ENST00000407404 NARFQ9UHQ1 456 aa21.79■■□□□ 1.08
NR1H3-204ENST00000407404 PIP4K2AP48426 406 aaPredicted RBP21.78■■□□□ 1.08
NR1H3-204ENST00000407404 MBIPQ9NS73 344 aa21.78■■□□□ 1.08
NR1H3-204ENST00000407404 USPL1Q5W0Q7 1092 aa21.77■■□□□ 1.07
NR1H3-204ENST00000407404 MIER1Q8N108 512 aa21.77■■□□□ 1.07
NR1H3-204ENST00000407404 FHDC1Q9C0D6 1143 aaPredicted RBP21.77■■□□□ 1.07
NR1H3-204ENST00000407404 SALL2Q9Y467 1007 aaPredicted RBP21.77■■□□□ 1.07
NR1H3-204ENST00000407404 NBPF26B4DH59 902 aa21.76■■□□□ 1.07
NR1H3-204ENST00000407404 NBPF10Q6P3W6 841 aaKnown RBP21.76■■□□□ 1.07
NR1H3-204ENST00000407404 NGEFQ8N5V2 710 aa21.76■■□□□ 1.07
NR1H3-204ENST00000407404 NBPF15Q8N660 670 aa21.76■■□□□ 1.07
NR1H3-204ENST00000407404 MMP10P09238 476 aa21.75■■□□□ 1.07
NR1H3-204ENST00000407404 FKBP8Q14318 412 aa21.75■■□□□ 1.07
NR1H3-204ENST00000407404 KLHL34Q8N239 644 aa21.75■■□□□ 1.07
NR1H3-204ENST00000407404 SYT17Q9BSW7 474 aa21.74■■□□□ 1.07
NR1H3-204ENST00000407404 TBC1D2BQ9UPU7 963 aa21.74■■□□□ 1.07
NR1H3-204ENST00000407404 EIF2S2P20042 333 aaKnown RBP21.73■■□□□ 1.07
NR1H3-204ENST00000407404 KRT24Q2M2I5 525 aa21.73■■□□□ 1.07
NR1H3-204ENST00000407404 IL16Q14005 1332 aa21.72■■□□□ 1.07
NR1H3-204ENST00000407404 ERBB4Q15303 1308 aa21.72■■□□□ 1.07
NR1H3-204ENST00000407404 DZIP3Q86Y13 1208 aaKnown RBP21.72■■□□□ 1.07
NR1H3-204ENST00000407404 WDR63Q8IWG1 891 aa21.72■■□□□ 1.07
NR1H3-204ENST00000407404 PARP3Q9Y6F1 533 aa21.72■■□□□ 1.07
NR1H3-204ENST00000407404 HOXB7P09629 217 aa21.71■■□□□ 1.07
NR1H3-204ENST00000407404 BCL2L12Q9HB09 334 aa21.71■■□□□ 1.07
NR1H3-204ENST00000407404 MYL6BP14649 208 aa21.7■■□□□ 1.06
NR1H3-204ENST00000407404 DUSP27Q5VZP5 1158 aa21.7■■□□□ 1.06
NR1H3-204ENST00000407404 SCN7AQ01118 1682 aa21.7■■□□□ 1.06
NR1H3-204ENST00000407404 CAMTA2O94983 1202 aa21.69■■□□□ 1.06
NR1H3-204ENST00000407404 TM4SF1P30408 202 aa21.69■■□□□ 1.06
NR1H3-204ENST00000407404 NECTIN2Q92692 538 aa21.69■■□□□ 1.06
NR1H3-204ENST00000407404 TSR2Q969E8 191 aaKnown RBP21.68■■□□□ 1.06
NR1H3-204ENST00000407404 CD2APQ9Y5K6 639 aa21.68■■□□□ 1.06
NR1H3-204ENST00000407404 BCORQ6W2J9 1755 aa21.68■■□□□ 1.06
NR1H3-204ENST00000407404 DDR1Q08345 913 aa21.67■■□□□ 1.06
NR1H3-204ENST00000407404 NFIXQ14938 502 aa21.67■■□□□ 1.06
NR1H3-204ENST00000407404 HDGFL1Q5TGJ6 251 aa21.67■■□□□ 1.06
NR1H3-204ENST00000407404 PDIA6Q15084 440 aa21.66■■□□□ 1.06
NR1H3-204ENST00000407404 POLRMTO00411 1230 aaKnown RBP21.65■■□□□ 1.06
NR1H3-204ENST00000407404 ELL2O00472 640 aaPredicted RBP21.65■■□□□ 1.06
NR1H3-204ENST00000407404 TBC1D9BQ66K14 1250 aa21.65■■□□□ 1.06
NR1H3-204ENST00000407404 BICDL1Q6ZP65 573 aa21.65■■□□□ 1.06
NR1H3-204ENST00000407404 C8orf58Q8NAV2 365 aa21.65■■□□□ 1.06
NR1H3-204ENST00000407404 ZNF652Q9Y2D9 606 aa21.65■■□□□ 1.06
NR1H3-204ENST00000407404 RGL2O15211 777 aa21.64■■□□□ 1.05
NR1H3-204ENST00000407404 CLEC4GQ6UXB4 293 aa21.64■■□□□ 1.05
NR1H3-204ENST00000407404 KIF6Q6ZMV9 814 aa21.64■■□□□ 1.05
NR1H3-204ENST00000407404 NLGN2Q8NFZ4 835 aa21.64■■□□□ 1.05
NR1H3-204ENST00000407404 DDX21Q9NR30 783 aaKnown RBP eCLIP21.64■■□□□ 1.05
NR1H3-204ENST00000407404 ANXA1P04083 346 aa21.63■■□□□ 1.05
NR1H3-204ENST00000407404 PROSER3Q2NL68 480 aa21.63■■□□□ 1.05
NR1H3-204ENST00000407404 ERVV-1B6SEH8 477 aa21.62■■□□□ 1.05
NR1H3-204ENST00000407404 TTLL7Q6ZT98 887 aa21.62■■□□□ 1.05
NR1H3-204ENST00000407404 LRP10Q7Z4F1 713 aa21.62■■□□□ 1.05
NR1H3-204ENST00000407404 CHMP4AQ9BY43 222 aa21.62■■□□□ 1.05
NR1H3-204ENST00000407404 CHPF2Q9P2E5 772 aa21.62■■□□□ 1.05
NR1H3-204ENST00000407404 DBF4Q9UBU7 674 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms