RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 ZBTB7CA1YPR0 619 aa11.48□□□□□ -0.57
PTPN12-202ENST00000407343 PATL2C9JE40 543 aaKnown RBP11.48□□□□□ -0.57
PTPN12-202ENST00000407343 C4orf17Q53FE4 359 aa11.48□□□□□ -0.57
PTPN12-202ENST00000407343 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
PTPN12-202ENST00000407343 RHBDD1Q8TEB9 315 aa11.48□□□□□ -0.57
PTPN12-202ENST00000407343 ATP13A2Q9NQ11 1180 aa11.48□□□□□ -0.57
PTPN12-202ENST00000407343 NOS2P35228 1153 aa11.47□□□□□ -0.57
PTPN12-202ENST00000407343 CHMP7Q8WUX9 453 aaPredicted RBP11.47□□□□□ -0.57
PTPN12-202ENST00000407343 IRX2Q9BZI1 471 aaPredicted RBP11.47□□□□□ -0.57
PTPN12-202ENST00000407343 TTLL8A6PVC2 850 aa11.46□□□□□ -0.57
PTPN12-202ENST00000407343 L3MBTL2Q969R5 705 aa11.46□□□□□ -0.57
PTPN12-202ENST00000407343 PARP3Q9Y6F1 533 aa11.46□□□□□ -0.57
PTPN12-202ENST00000407343 SCARF1Q14162 830 aa11.45□□□□□ -0.58
PTPN12-202ENST00000407343 SLC27A3Q5K4L6 730 aa11.45□□□□□ -0.58
PTPN12-202ENST00000407343 TMEM214Q6NUQ4 689 aaKnown RBP11.45□□□□□ -0.58
PTPN12-202ENST00000407343 CCER1Q8TC90 406 aaPredicted RBP11.45□□□□□ -0.58
PTPN12-202ENST00000407343 C7orf43Q8WVR3 580 aa11.45□□□□□ -0.58
PTPN12-202ENST00000407343 NIFKQ9BYG3 293 aaKnown RBP11.45□□□□□ -0.58
PTPN12-202ENST00000407343 SAP130Q9H0E3 1048 aa11.45□□□□□ -0.58
PTPN12-202ENST00000407343 QTRT2Q9H974 415 aaKnown RBP11.45□□□□□ -0.58
PTPN12-202ENST00000407343 DNMT3LQ9UJW3 386 aa11.45□□□□□ -0.58
PTPN12-202ENST00000407343 SERTM1A2A2V5 107 aa11.44□□□□□ -0.58
PTPN12-202ENST00000407343 PTCD1O75127 700 aaKnown RBP11.44□□□□□ -0.58
PTPN12-202ENST00000407343 ECM1Q16610 540 aa11.44□□□□□ -0.58
PTPN12-202ENST00000407343 NBPF10Q6P3W6 841 aaKnown RBP11.44□□□□□ -0.58
PTPN12-202ENST00000407343 GZF1Q9H116 711 aaPredicted RBP11.44□□□□□ -0.58
PTPN12-202ENST00000407343 CABP1Q9NZU7 370 aa11.44□□□□□ -0.58
PTPN12-202ENST00000407343 DNMT3AQ9Y6K1 912 aaPredicted RBP11.44□□□□□ -0.58
PTPN12-202ENST00000407343 TXLNAP40222 546 aa11.43□□□□□ -0.58
PTPN12-202ENST00000407343 POU4F2Q12837 409 aa11.43□□□□□ -0.58
PTPN12-202ENST00000407343 PRICKLE2Q7Z3G6 844 aa11.43□□□□□ -0.58
PTPN12-202ENST00000407343 GTF3C2Q8WUA4 911 aaPredicted RBP11.43□□□□□ -0.58
PTPN12-202ENST00000407343 NAA30Q147X3 362 aaPredicted RBP11.42□□□□□ -0.58
PTPN12-202ENST00000407343 LYSMD3Q7Z3D4 306 aa11.42□□□□□ -0.58
PTPN12-202ENST00000407343 MYO19Q96H55 970 aa11.42□□□□□ -0.58
PTPN12-202ENST00000407343 EGFL7Q9UHF1 273 aa11.42□□□□□ -0.58
PTPN12-202ENST00000407343 LRFN2Q9ULH4 789 aa11.42□□□□□ -0.58
PTPN12-202ENST00000407343 SOWAHDA6NJG2 315 aa11.41□□□□□ -0.58
PTPN12-202ENST00000407343 FIGNL2A6NMB9 653 aa11.41□□□□□ -0.58
PTPN12-202ENST00000407343 PLA2G4AP47712 749 aa11.41□□□□□ -0.58
PTPN12-202ENST00000407343 WDR44Q5JSH3 913 aa11.41□□□□□ -0.58
PTPN12-202ENST00000407343 GNASQ5JWF2 1037 aa11.41□□□□□ -0.58
PTPN12-202ENST00000407343 COX20Q5RI15 118 aa11.41□□□□□ -0.58
PTPN12-202ENST00000407343 KLRG1Q96E93 195 aa11.41□□□□□ -0.58
PTPN12-202ENST00000407343 TNFRSF10BO14763 440 aa11.4□□□□□ -0.58
PTPN12-202ENST00000407343 PHKA2P46019 1235 aa11.4□□□□□ -0.58
PTPN12-202ENST00000407343 ZNF211Q13398 564 aaPredicted RBP11.4□□□□□ -0.58
PTPN12-202ENST00000407343 FAM26DQ5JW98 314 aa11.4□□□□□ -0.58
PTPN12-202ENST00000407343 ALDH16A1Q8IZ83 802 aa11.4□□□□□ -0.58
PTPN12-202ENST00000407343 HCN4Q9Y3Q4 1203 aa11.4□□□□□ -0.58
PTPN12-202ENST00000407343 RHOQP17081 205 aa11.39□□□□□ -0.59
PTPN12-202ENST00000407343 ATP4AP20648 1035 aa11.39□□□□□ -0.59
PTPN12-202ENST00000407343 MTMR3Q13615 1198 aa11.39□□□□□ -0.59
PTPN12-202ENST00000407343 SND1Q7KZF4 910 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTPN12-202ENST00000407343 HELQQ8TDG4 1101 aa11.39□□□□□ -0.59
PTPN12-202ENST00000407343 PHACTR1Q9C0D0 580 aa11.39□□□□□ -0.59
PTPN12-202ENST00000407343 PODXL2Q9NZ53 605 aa11.39□□□□□ -0.59
PTPN12-202ENST00000407343 SENP3-EIF4A1A0A087X0R7 540 aa11.38□□□□□ -0.59
PTPN12-202ENST00000407343 ICMTO60725 284 aa11.38□□□□□ -0.59
PTPN12-202ENST00000407343 C16orf46Q6P387 395 aa11.38□□□□□ -0.59
PTPN12-202ENST00000407343 ZNF232Q9UNY5 417 aa11.38□□□□□ -0.59
PTPN12-202ENST00000407343 SOBPA7XYQ1 873 aa11.37□□□□□ -0.59
PTPN12-202ENST00000407343 NPR3P17342 541 aa11.37□□□□□ -0.59
PTPN12-202ENST00000407343 C1orf53Q5VUE5 145 aa11.37□□□□□ -0.59
PTPN12-202ENST00000407343 ANO2Q9NQ90 1003 aa11.37□□□□□ -0.59
PTPN12-202ENST00000407343 ZDHHC3Q9NYG2 299 aa11.37□□□□□ -0.59
PTPN12-202ENST00000407343 GTF2E1P29083 439 aaPredicted RBP11.36□□□□□ -0.59
PTPN12-202ENST00000407343 RTN1Q16799 776 aa11.36□□□□□ -0.59
PTPN12-202ENST00000407343 VTI1AQ96AJ9 217 aa11.36□□□□□ -0.59
PTPN12-202ENST00000407343 NGLY1Q96IV0 654 aa11.36□□□□□ -0.59
PTPN12-202ENST00000407343 MTMR7Q9Y216 660 aa11.36□□□□□ -0.59
PTPN12-202ENST00000407343 CHMP3Q9Y3E7 222 aa11.36□□□□□ -0.59
PTPN12-202ENST00000407343 ABL1P00519 1130 aa11.35□□□□□ -0.59
PTPN12-202ENST00000407343 GMPR2Q9P2T1 348 aaKnown RBP11.35□□□□□ -0.59
PTPN12-202ENST00000407343 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.34□□□□□ -0.59
PTPN12-202ENST00000407343 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
PTPN12-202ENST00000407343 BCS1LQ9Y276 419 aa11.34□□□□□ -0.59
PTPN12-202ENST00000407343 ARHGAP4P98171 946 aa11.33□□□□□ -0.6
PTPN12-202ENST00000407343 FKBP4Q02790 459 aaKnown RBP eCLIP11.33□□□□□ -0.6
PTPN12-202ENST00000407343 H3BRB1 525 aa11.32□□□□□ -0.6
PTPN12-202ENST00000407343 MSX1P28360 303 aa11.32□□□□□ -0.6
PTPN12-202ENST00000407343 SF3B2Q13435 895 aaKnown RBP11.32□□□□□ -0.6
PTPN12-202ENST00000407343 TUT1Q9H6E5 874 aaKnown RBP11.32□□□□□ -0.6
PTPN12-202ENST00000407343 TIMMDC1Q9NPL8 285 aa11.32□□□□□ -0.6
PTPN12-202ENST00000407343 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.32□□□□□ -0.67e-6■■■■■ 74.5
PTPN12-202ENST00000407343 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
PTPN12-202ENST00000407343 NBPF1Q3BBV0 1214 aa11.31□□□□□ -0.6
PTPN12-202ENST00000407343 KLK14Q9P0G3 267 aa11.31□□□□□ -0.6
PTPN12-202ENST00000407343 DYRK1BQ9Y463 629 aa11.31□□□□□ -0.6
PTPN12-202ENST00000407343 ZBTB39O15060 712 aa11.3□□□□□ -0.6
PTPN12-202ENST00000407343 MAN1A2O60476 641 aa11.3□□□□□ -0.6
PTPN12-202ENST00000407343 THBS1P07996 1170 aa11.3□□□□□ -0.6
PTPN12-202ENST00000407343 SNRPBP14678 240 aaKnown RBP11.3□□□□□ -0.6
PTPN12-202ENST00000407343 MPSTP25325 297 aa11.3□□□□□ -0.6
PTPN12-202ENST00000407343 DGKZQ13574 1117 aa11.3□□□□□ -0.6
PTPN12-202ENST00000407343 Q6ZNB5 142 aa11.3□□□□□ -0.6
PTPN12-202ENST00000407343 ETFBKMTQ8IXQ9 262 aa11.3□□□□□ -0.6
PTPN12-202ENST00000407343 AIDAQ96BJ3 306 aa11.3□□□□□ -0.6
PTPN12-202ENST00000407343 ZIC5Q96T25 663 aa11.3□□□□□ -0.6
PTPN12-202ENST00000407343 SLC35F4A4IF30 521 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms