RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 HS1BP3Q53T59 392 aa15.53■□□□□ 0.08
SNED1-205ENST00000405547 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
SNED1-205ENST00000405547 PHAXQ9H814 394 aaKnown RBP15.53■□□□□ 0.08
SNED1-205ENST00000405547 KCNH5Q8NCM2 988 aa15.53■□□□□ 0.08
SNED1-205ENST00000405547 AIDAQ96BJ3 306 aa15.53■□□□□ 0.08
SNED1-205ENST00000405547 HSP90AB3PQ58FF7 597 aa15.53■□□□□ 0.08
SNED1-205ENST00000405547 XRCC6P12956 609 aaKnown RBP eCLIP15.52■□□□□ 0.08
SNED1-205ENST00000405547 SPA17Q15506 151 aa15.52■□□□□ 0.08
SNED1-205ENST00000405547 PLB1Q6P1J6 1458 aa15.52■□□□□ 0.08
SNED1-205ENST00000405547 POTEB2H3BUK9 544 aa15.52■□□□□ 0.08
SNED1-205ENST00000405547 KIF4BQ2VIQ3 1234 aa15.52■□□□□ 0.08
SNED1-205ENST00000405547 PPP4R3BQ5MIZ7 849 aa15.52■□□□□ 0.08
SNED1-205ENST00000405547 SHTN1A0MZ66 631 aa15.52■□□□□ 0.07
SNED1-205ENST00000405547 ANAPC15P60006 121 aa15.52■□□□□ 0.07
SNED1-205ENST00000405547 ANKRD18AQ8IVF6 992 aa15.52■□□□□ 0.07
SNED1-205ENST00000405547 ZSCAN16Q9H4T2 348 aaPredicted RBP15.52■□□□□ 0.07
SNED1-205ENST00000405547 PARD3Q8TEW0 1356 aa15.52■□□□□ 0.07
SNED1-205ENST00000405547 HMG20BQ9P0W2 317 aa15.52■□□□□ 0.07
SNED1-205ENST00000405547 GJB2P29033 226 aa15.51■□□□□ 0.07
SNED1-205ENST00000405547 SAMD1Q6SPF0 538 aaPredicted RBP15.51■□□□□ 0.07
SNED1-205ENST00000405547 AMOTQ4VCS5 1084 aa15.51■□□□□ 0.07
SNED1-205ENST00000405547 TAF4BQ92750 862 aa15.51■□□□□ 0.07
SNED1-205ENST00000405547 ZHX3Q9H4I2 956 aa15.51■□□□□ 0.07
SNED1-205ENST00000405547 HYPKQ9NX55 129 aa15.51■□□□□ 0.07
SNED1-205ENST00000405547 LRP2BPQ9P2M1 347 aa15.51■□□□□ 0.07
SNED1-205ENST00000405547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNED1-205ENST00000405547 FAM177BA6PVY3 158 aa15.51■□□□□ 0.07
SNED1-205ENST00000405547 PRDM10Q9NQV6 1147 aa15.51■□□□□ 0.07
SNED1-205ENST00000405547 NUP160Q12769 1436 aa15.51■□□□□ 0.07
SNED1-205ENST00000405547 IDH1O75874 414 aaKnown RBP15.5■□□□□ 0.07
SNED1-205ENST00000405547 C8orf34Q49A92 452 aa15.5■□□□□ 0.07
SNED1-205ENST00000405547 TTC21BQ7Z4L5 1316 aa15.5■□□□□ 0.07
SNED1-205ENST00000405547 ENOX2Q16206 610 aaKnown RBP15.5■□□□□ 0.07
SNED1-205ENST00000405547 FSIP1Q8NA03 581 aa15.5■□□□□ 0.07
SNED1-205ENST00000405547 GDPD2Q9HCC8 539 aa15.5■□□□□ 0.07
SNED1-205ENST00000405547 CCDC171Q6TFL3 1326 aa15.5■□□□□ 0.07
SNED1-205ENST00000405547 STK11IPQ8N1F8 1099 aa15.5■□□□□ 0.07
SNED1-205ENST00000405547 FLIIQ13045 1269 aa15.5■□□□□ 0.07
SNED1-205ENST00000405547 PCDHB15Q9Y5E8 787 aa15.5■□□□□ 0.07
SNED1-205ENST00000405547 ANKRD36BQ8N2N9 1353 aa15.5■□□□□ 0.07
SNED1-205ENST00000405547 FGFR1OPO95684 399 aaKnown RBP15.5■□□□□ 0.07
SNED1-205ENST00000405547 DNAAF4Q8WXU2 420 aa15.5■□□□□ 0.07
SNED1-205ENST00000405547 SNW1Q13573 536 aaKnown RBP15.5■□□□□ 0.07
SNED1-205ENST00000405547 CNNM3Q8NE01 707 aa15.5■□□□□ 0.07
SNED1-205ENST00000405547 ECHDC1Q9NTX5 307 aa15.5■□□□□ 0.07
SNED1-205ENST00000405547 CCDC150Q8NCX0 1101 aa15.49■□□□□ 0.07
SNED1-205ENST00000405547 TRMT1Q9NXH9 659 aaKnown RBP15.49■□□□□ 0.07
SNED1-205ENST00000405547 F6X3S4 739 aa15.49■□□□□ 0.07
SNED1-205ENST00000405547 UBE2Q2Q8WVN8 375 aa15.49■□□□□ 0.07
SNED1-205ENST00000405547 DBF4Q9UBU7 674 aaPredicted RBP15.49■□□□□ 0.07
SNED1-205ENST00000405547 FKBP15Q5T1M5 1219 aa15.49■□□□□ 0.07
SNED1-205ENST00000405547 CEP135Q66GS9 1140 aa15.49■□□□□ 0.07
SNED1-205ENST00000405547 ZNF287Q9HBT7 754 aa15.49■□□□□ 0.07
SNED1-205ENST00000405547 RBM27Q9P2N5 1060 aaKnown RBP15.49■□□□□ 0.07
SNED1-205ENST00000405547 BMS1Q14692 1282 aaKnown RBP15.49■□□□□ 0.07
SNED1-205ENST00000405547 INCENPQ9NQS7 918 aa15.49■□□□□ 0.07
SNED1-205ENST00000405547 HCLS1P14317 486 aaPredicted RBP15.48■□□□□ 0.07
SNED1-205ENST00000405547 KLHL10Q6JEL2 608 aa15.48■□□□□ 0.07
SNED1-205ENST00000405547 TMX3Q96JJ7 454 aa15.48■□□□□ 0.07
SNED1-205ENST00000405547 ZSCAN22P10073 491 aaPredicted RBP15.48■□□□□ 0.07
SNED1-205ENST00000405547 TOM1L2Q6ZVM7 507 aa15.48■□□□□ 0.07
SNED1-205ENST00000405547 IFIT1P09914 478 aaKnown RBP15.48■□□□□ 0.07
SNED1-205ENST00000405547 NAPBQ9H115 298 aa15.48■□□□□ 0.07
SNED1-205ENST00000405547 ZNF213O14771 459 aa15.48■□□□□ 0.07
SNED1-205ENST00000405547 TAX1BP1Q86VP1 789 aa15.48■□□□□ 0.07
SNED1-205ENST00000405547 METTL24Q5JXM2 366 aa15.47■□□□□ 0.07
SNED1-205ENST00000405547 SDSP20132 328 aa15.47■□□□□ 0.07
SNED1-205ENST00000405547 ATP2B2Q01814 1243 aa15.47■□□□□ 0.07
SNED1-205ENST00000405547 KANK3Q6NY19 840 aa15.47■□□□□ 0.07
SNED1-205ENST00000405547 GRIN2AQ12879 1464 aa15.47■□□□□ 0.07
SNED1-205ENST00000405547 PROSER2Q86WR7 435 aaPredicted RBP15.47■□□□□ 0.07
SNED1-205ENST00000405547 ZKSCAN5Q9Y2L8 839 aa15.47■□□□□ 0.07
SNED1-205ENST00000405547 PPP1R12BO60237 982 aaPredicted RBP15.47■□□□□ 0.07
SNED1-205ENST00000405547 USO1O60763 962 aaKnown RBP15.46■□□□□ 0.07
SNED1-205ENST00000405547 GBP2P32456 591 aaPredicted RBP15.46■□□□□ 0.07
SNED1-205ENST00000405547 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.07
SNED1-205ENST00000405547 STARD3NLO95772 234 aa15.46■□□□□ 0.07
SNED1-205ENST00000405547 PAFAH1B1P43034 410 aa15.46■□□□□ 0.07
SNED1-205ENST00000405547 TMC6Q7Z403 805 aa15.46■□□□□ 0.07
SNED1-205ENST00000405547 ADGRL1O94910 1474 aa15.46■□□□□ 0.07
SNED1-205ENST00000405547 TFIP11Q9UBB9 837 aaKnown RBP15.46■□□□□ 0.07
SNED1-205ENST00000405547 DUOX2Q9NRD8 1548 aa15.46■□□□□ 0.07
SNED1-205ENST00000405547 ADGRF5Q8IZF2 1346 aa15.46■□□□□ 0.07
SNED1-205ENST00000405547 PIK3R4Q99570 1358 aa15.46■□□□□ 0.06
SNED1-205ENST00000405547 GOLGA8BA8MQT2 603 aa15.46■□□□□ 0.06
SNED1-205ENST00000405547 NOLC1Q14978 699 aaKnown RBP eCLIP15.46■□□□□ 0.06
SNED1-205ENST00000405547 VPS36Q86VN1 386 aa15.46■□□□□ 0.06
SNED1-205ENST00000405547 NUP88Q99567 741 aaPredicted RBP15.46■□□□□ 0.06
SNED1-205ENST00000405547 PYM1Q9BRP8 204 aaKnown RBP15.46■□□□□ 0.06
SNED1-205ENST00000405547 PODXL2Q9NZ53 605 aa15.46■□□□□ 0.06
SNED1-205ENST00000405547 ARHGEF12Q9NZN5 1544 aa15.45■□□□□ 0.06
SNED1-205ENST00000405547 IGHMBP2P38935 993 aaKnown RBP15.45■□□□□ 0.06
SNED1-205ENST00000405547 RAB3GAP1Q15042 981 aa15.45■□□□□ 0.06
SNED1-205ENST00000405547 DDX54Q8TDD1 881 aaKnown RBP15.45■□□□□ 0.06
SNED1-205ENST00000405547 STRN4Q9NRL3 753 aa15.45■□□□□ 0.06
SNED1-205ENST00000405547 SLC12A7Q9Y666 1083 aa15.45■□□□□ 0.06
SNED1-205ENST00000405547 PRAG1Q86YV5 1406 aa15.45■□□□□ 0.06
SNED1-205ENST00000405547 WAPLQ7Z5K2 1190 aa15.45■□□□□ 0.06
SNED1-205ENST00000405547 MBIPQ9NS73 344 aa15.45■□□□□ 0.06
SNED1-205ENST00000405547 GPATCH8Q9UKJ3 1502 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms