RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 CCDC87Q9NVE4 849 aa23.69■■□□□ 1.38
SBF1-203ENST00000399627 IFT57Q9NWB7 429 aa23.69■■□□□ 1.38
SBF1-203ENST00000399627 RPS6KA4O75676 772 aa23.68■■□□□ 1.38
SBF1-203ENST00000399627 GNAI1P63096 354 aa23.68■■□□□ 1.38
SBF1-203ENST00000399627 NGEFQ8N5V2 710 aa23.68■■□□□ 1.38
SBF1-203ENST00000399627 RTCBQ9Y3I0 505 aaKnown RBP23.68■■□□□ 1.38
SBF1-203ENST00000399627 USP16Q9Y5T5 823 aa23.68■■□□□ 1.38
SBF1-203ENST00000399627 LAMB4A4D0S4 1761 aa23.68■■□□□ 1.38
SBF1-203ENST00000399627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.67■■□□□ 1.38
SBF1-203ENST00000399627 MSH5O43196 834 aa23.67■■□□□ 1.38
SBF1-203ENST00000399627 SSFA2P28290 1259 aa23.67■■□□□ 1.38
SBF1-203ENST00000399627 FLAD1Q8NFF5 587 aa23.67■■□□□ 1.38
SBF1-203ENST00000399627 MBIPQ9NS73 344 aa23.67■■□□□ 1.38
SBF1-203ENST00000399627 GIGYF1O75420 1035 aaPredicted RBP23.66■■□□□ 1.38
SBF1-203ENST00000399627 ZBTB1Q9Y2K1 713 aa23.66■■□□□ 1.38
SBF1-203ENST00000399627 IL16Q14005 1332 aa23.64■■□□□ 1.38
SBF1-203ENST00000399627 ZBTB7AO95365 584 aa23.64■■□□□ 1.37
SBF1-203ENST00000399627 A1BGP04217 495 aa23.64■■□□□ 1.37
SBF1-203ENST00000399627 WDR63Q8IWG1 891 aa23.64■■□□□ 1.37
SBF1-203ENST00000399627 C4AP0C0L4 1744 aa23.63■■□□□ 1.37
SBF1-203ENST00000399627 CANXP27824 592 aaKnown RBP23.63■■□□□ 1.37
SBF1-203ENST00000399627 KRT24Q2M2I5 525 aa23.63■■□□□ 1.37
SBF1-203ENST00000399627 TRAPPC3LQ5T215 181 aa23.63■■□□□ 1.37
SBF1-203ENST00000399627 SOS1Q07889 1333 aaPredicted RBP23.62■■□□□ 1.37
SBF1-203ENST00000399627 ADRA2BP18089 450 aa23.62■■□□□ 1.37
SBF1-203ENST00000399627 SLC16A10Q8TF71 515 aa23.62■■□□□ 1.37
SBF1-203ENST00000399627 ARHGEF1Q92888 912 aaKnown RBP23.62■■□□□ 1.37
SBF1-203ENST00000399627 ATF5Q9Y2D1 282 aaPredicted RBP23.61■■□□□ 1.37
SBF1-203ENST00000399627 ZNF521Q96K83 1311 aa23.6■■□□□ 1.37
SBF1-203ENST00000399627 PIP4K2AP48426 406 aaPredicted RBP23.6■■□□□ 1.37
SBF1-203ENST00000399627 TSR2Q969E8 191 aaKnown RBP23.6■■□□□ 1.37
SBF1-203ENST00000399627 MTFR1LQ9H019 292 aa23.6■■□□□ 1.37
SBF1-203ENST00000399627 COL15A1P39059 1388 aa23.58■■□□□ 1.37
SBF1-203ENST00000399627 RFC4P35249 363 aa23.58■■□□□ 1.37
SBF1-203ENST00000399627 EIF5P55010 431 aaKnown RBP23.58■■□□□ 1.37
SBF1-203ENST00000399627 SPON1Q9HCB6 807 aa23.58■■□□□ 1.37
SBF1-203ENST00000399627 COL24A1Q17RW2 1714 aa23.57■■□□□ 1.36
SBF1-203ENST00000399627 NBPF26B4DH59 902 aa23.57■■□□□ 1.36
SBF1-203ENST00000399627 EIF2S2P20042 333 aaKnown RBP23.57■■□□□ 1.36
SBF1-203ENST00000399627 IL6STP40189 918 aaPredicted RBP23.57■■□□□ 1.36
SBF1-203ENST00000399627 MSL1Q68DK7 614 aa23.57■■□□□ 1.36
SBF1-203ENST00000399627 NBPF10Q6P3W6 841 aaKnown RBP23.57■■□□□ 1.36
SBF1-203ENST00000399627 NBPF15Q8N660 670 aa23.57■■□□□ 1.36
SBF1-203ENST00000399627 SPINK5Q9NQ38 1064 aaPredicted RBP23.57■■□□□ 1.36
SBF1-203ENST00000399627 ZNF330Q9Y3S2 320 aaPredicted RBP23.57■■□□□ 1.36
SBF1-203ENST00000399627 LRP5O75197 1615 aa23.57■■□□□ 1.36
SBF1-203ENST00000399627 DUSP27Q5VZP5 1158 aa23.56■■□□□ 1.36
SBF1-203ENST00000399627 C8orf58Q8NAV2 365 aa23.55■■□□□ 1.36
SBF1-203ENST00000399627 SRP68Q9UHB9 627 aaKnown RBP23.55■■□□□ 1.36
SBF1-203ENST00000399627 FANCIQ9NVI1 1328 aa23.55■■□□□ 1.36
SBF1-203ENST00000399627 ELL2O00472 640 aaPredicted RBP23.54■■□□□ 1.36
SBF1-203ENST00000399627 HOXB7P09629 217 aa23.54■■□□□ 1.36
SBF1-203ENST00000399627 NECTIN2Q92692 538 aa23.54■■□□□ 1.36
SBF1-203ENST00000399627 A0A087WZG4 1122 aa23.53■■□□□ 1.36
SBF1-203ENST00000399627 PTGER2P43116 358 aa23.53■■□□□ 1.36
SBF1-203ENST00000399627 USP42Q9H9J4 1324 aaKnown RBP23.53■■□□□ 1.36
SBF1-203ENST00000399627 NPM2Q86SE8 214 aaKnown RBP23.52■■□□□ 1.36
SBF1-203ENST00000399627 SGIP1Q9BQI5 828 aa23.52■■□□□ 1.36
SBF1-203ENST00000399627 ERBB4Q15303 1308 aa23.52■■□□□ 1.36
SBF1-203ENST00000399627 ZPR1O75312 459 aa23.51■■□□□ 1.35
SBF1-203ENST00000399627 GYS1P13807 737 aa23.51■■□□□ 1.35
SBF1-203ENST00000399627 GOLGA2Q08379 1002 aa23.51■■□□□ 1.35
SBF1-203ENST00000399627 HDGFL1Q5TGJ6 251 aa23.51■■□□□ 1.35
SBF1-203ENST00000399627 USPL1Q5W0Q7 1092 aa23.51■■□□□ 1.35
SBF1-203ENST00000399627 TSPYL6Q8N831 410 aa23.51■■□□□ 1.35
SBF1-203ENST00000399627 MYH16Q9H6N6 1097 aa23.51■■□□□ 1.35
SBF1-203ENST00000399627 NARFQ9UHQ1 456 aa23.51■■□□□ 1.35
SBF1-203ENST00000399627 TBC1D2BQ9UPU7 963 aa23.51■■□□□ 1.35
SBF1-203ENST00000399627 MYL6BP14649 208 aa23.5■■□□□ 1.35
SBF1-203ENST00000399627 HNRNPUQ00839 825 aaKnown RBP eCLIP23.5■■□□□ 1.35
SBF1-203ENST00000399627 ARXQ96QS3 562 aa23.5■■□□□ 1.35
SBF1-203ENST00000399627 ANXA1P04083 346 aa23.49■■□□□ 1.35
SBF1-203ENST00000399627 PDIA6Q15084 440 aa23.49■■□□□ 1.35
SBF1-203ENST00000399627 PROSER3Q2NL68 480 aa23.49■■□□□ 1.35
SBF1-203ENST00000399627 POLD1P28340 1107 aa23.48■■□□□ 1.35
SBF1-203ENST00000399627 EXOSC9Q06265 439 aaKnown RBP23.48■■□□□ 1.35
SBF1-203ENST00000399627 DZIP3Q86Y13 1208 aaKnown RBP23.48■■□□□ 1.35
SBF1-203ENST00000399627 NLGN1Q8N2Q7 840 aa23.48■■□□□ 1.35
SBF1-203ENST00000399627 SCN7AQ01118 1682 aa23.48■■□□□ 1.35
SBF1-203ENST00000399627 BCORQ6W2J9 1755 aa23.47■■□□□ 1.35
SBF1-203ENST00000399627 FKBP8Q14318 412 aa23.47■■□□□ 1.35
SBF1-203ENST00000399627 BCL2L12Q9HB09 334 aa23.47■■□□□ 1.35
SBF1-203ENST00000399627 CHPF2Q9P2E5 772 aa23.47■■□□□ 1.35
SBF1-203ENST00000399627 E9PSI1 815 aa23.46■■□□□ 1.35
SBF1-203ENST00000399627 SLFN5Q08AF3 891 aa23.46■■□□□ 1.35
SBF1-203ENST00000399627 TWISTNBQ3B726 338 aaPredicted RBP23.46■■□□□ 1.35
SBF1-203ENST00000399627 CDCA7LQ96GN5 454 aa23.46■■□□□ 1.35
SBF1-203ENST00000399627 DDX21Q9NR30 783 aaKnown RBP eCLIP23.46■■□□□ 1.35
SBF1-203ENST00000399627 CAMTA2O94983 1202 aa23.45■■□□□ 1.34
SBF1-203ENST00000399627 LRP10Q7Z4F1 713 aa23.45■■□□□ 1.34
SBF1-203ENST00000399627 PPP1R1BQ9UD71 204 aaPredicted RBP23.45■■□□□ 1.34
SBF1-203ENST00000399627 MMP10P09238 476 aa23.44■■□□□ 1.34
SBF1-203ENST00000399627 TTLL7Q6ZT98 887 aa23.44■■□□□ 1.34
SBF1-203ENST00000399627 DBF4Q9UBU7 674 aaPredicted RBP23.43■■□□□ 1.34
SBF1-203ENST00000399627 NUP98P52948 1817 aa23.43■■□□□ 1.34
SBF1-203ENST00000399627 CCDC30Q5VVM6 783 aa23.42■■□□□ 1.34
SBF1-203ENST00000399627 VAMP4O75379 141 aa23.41■■□□□ 1.34
SBF1-203ENST00000399627 XAGE3Q8WTP9 111 aa23.41■■□□□ 1.34
SBF1-203ENST00000399627 CHMP4AQ9BY43 222 aa23.41■■□□□ 1.34
SBF1-203ENST00000399627 CACNA1FO60840 1977 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms