RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 CRKLP46109 303 aaKnown RBP13.64□□□□□ -0.23
CYCSP55-201ENST00000399027 GNAI1P63096 354 aa13.64□□□□□ -0.23
CYCSP55-201ENST00000399027 WDR63Q8IWG1 891 aa13.64□□□□□ -0.23
CYCSP55-201ENST00000399027 AK7Q96M32 723 aa13.64□□□□□ -0.23
CYCSP55-201ENST00000399027 SENP3-EIF4A1A0A087X0R7 540 aa13.63□□□□□ -0.23
CYCSP55-201ENST00000399027 GIGYF1O75420 1035 aaPredicted RBP13.63□□□□□ -0.23
CYCSP55-201ENST00000399027 SSFA2P28290 1259 aa13.63□□□□□ -0.23
CYCSP55-201ENST00000399027 INTS5Q6P9B9 1019 aaKnown RBP13.63□□□□□ -0.23
CYCSP55-201ENST00000399027 TFCP2L1Q9NZI6 479 aa13.63□□□□□ -0.23
CYCSP55-201ENST00000399027 SCN7AQ01118 1682 aa13.63□□□□□ -0.23
CYCSP55-201ENST00000399027 PRAMEF22A3QJZ6 481 aa13.62□□□□□ -0.23
CYCSP55-201ENST00000399027 GNPATO15228 680 aa13.62□□□□□ -0.23
CYCSP55-201ENST00000399027 RPS6KA4O75676 772 aa13.62□□□□□ -0.23
CYCSP55-201ENST00000399027 STARD3NLO95772 234 aa13.62□□□□□ -0.23
CYCSP55-201ENST00000399027 AMIGO3Q86WK7 504 aa13.62□□□□□ -0.23
CYCSP55-201ENST00000399027 FLAD1Q8NFF5 587 aa13.62□□□□□ -0.23
CYCSP55-201ENST00000399027 MBIPQ9NS73 344 aa13.62□□□□□ -0.23
CYCSP55-201ENST00000399027 CCDC87Q9NVE4 849 aa13.62□□□□□ -0.23
CYCSP55-201ENST00000399027 RTCBQ9Y3I0 505 aaKnown RBP13.61□□□□□ -0.23
CYCSP55-201ENST00000399027 SALL2Q9Y467 1007 aaPredicted RBP13.61□□□□□ -0.23
CYCSP55-201ENST00000399027 LAS1LQ9Y4W2 734 aaKnown RBP13.61□□□□□ -0.23
CYCSP55-201ENST00000399027 USP16Q9Y5T5 823 aa13.61□□□□□ -0.23
CYCSP55-201ENST00000399027 CACNA1FO60840 1977 aa13.61□□□□□ -0.23
CYCSP55-201ENST00000399027 MSH5O43196 834 aa13.6□□□□□ -0.23
CYCSP55-201ENST00000399027 COL23A1Q86Y22 540 aaPredicted RBP13.6□□□□□ -0.23
CYCSP55-201ENST00000399027 SLC16A10Q8TF71 515 aa13.6□□□□□ -0.23
CYCSP55-201ENST00000399027 PDGFDQ9GZP0 370 aaPredicted RBP13.6□□□□□ -0.23
CYCSP55-201ENST00000399027 SOS1Q07889 1333 aaPredicted RBP13.6□□□□□ -0.23
CYCSP55-201ENST00000399027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.59□□□□□ -0.23
CYCSP55-201ENST00000399027 HOXB7P09629 217 aa13.59□□□□□ -0.23
CYCSP55-201ENST00000399027 ZBTB1Q9Y2K1 713 aa13.59□□□□□ -0.23
CYCSP55-201ENST00000399027 COL15A1P39059 1388 aa13.58□□□□□ -0.23
CYCSP55-201ENST00000399027 NUP98P52948 1817 aa13.57□□□□□ -0.24
CYCSP55-201ENST00000399027 PHF14O94880 888 aa13.57□□□□□ -0.24
CYCSP55-201ENST00000399027 A1BGP04217 495 aa13.57□□□□□ -0.24
CYCSP55-201ENST00000399027 IL6STP40189 918 aaPredicted RBP13.57□□□□□ -0.24
CYCSP55-201ENST00000399027 EIF5P55010 431 aaKnown RBP13.57□□□□□ -0.24
CYCSP55-201ENST00000399027 KRT24Q2M2I5 525 aa13.57□□□□□ -0.24
CYCSP55-201ENST00000399027 TRAPPC3LQ5T215 181 aa13.57□□□□□ -0.24
CYCSP55-201ENST00000399027 SMIM5Q71RC9 77 aa13.57□□□□□ -0.24
CYCSP55-201ENST00000399027 ARHGEF1Q92888 912 aaKnown RBP13.57□□□□□ -0.24
CYCSP55-201ENST00000399027 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
CYCSP55-201ENST00000399027 ERBB4Q15303 1308 aa13.57□□□□□ -0.24
CYCSP55-201ENST00000399027 FANCIQ9NVI1 1328 aa13.57□□□□□ -0.24
CYCSP55-201ENST00000399027 ANKRD36CQ5JPF3 1778 aa13.56□□□□□ -0.24
CYCSP55-201ENST00000399027 TSR2Q969E8 191 aaKnown RBP13.56□□□□□ -0.24
CYCSP55-201ENST00000399027 MTFR1LQ9H019 292 aa13.56□□□□□ -0.24
CYCSP55-201ENST00000399027 NBPF26B4DH59 902 aa13.55□□□□□ -0.24
CYCSP55-201ENST00000399027 CANXP27824 592 aaKnown RBP13.55□□□□□ -0.24
CYCSP55-201ENST00000399027 GOLGA2Q08379 1002 aa13.55□□□□□ -0.24
CYCSP55-201ENST00000399027 DUSP27Q5VZP5 1158 aa13.55□□□□□ -0.24
CYCSP55-201ENST00000399027 NBPF10Q6P3W6 841 aaKnown RBP13.55□□□□□ -0.24
CYCSP55-201ENST00000399027 NBPF15Q8N660 670 aa13.55□□□□□ -0.24
CYCSP55-201ENST00000399027 NRXN2Q9P2S2 1712 aa13.54□□□□□ -0.24
CYCSP55-201ENST00000399027 RFC4P35249 363 aa13.54□□□□□ -0.24
CYCSP55-201ENST00000399027 C8orf58Q8NAV2 365 aa13.54□□□□□ -0.24
CYCSP55-201ENST00000399027 SGIP1Q9BQI5 828 aa13.54□□□□□ -0.24
CYCSP55-201ENST00000399027 MYH16Q9H6N6 1097 aa13.54□□□□□ -0.24
CYCSP55-201ENST00000399027 AFDNP55196 1824 aaKnown RBP13.54□□□□□ -0.24
CYCSP55-201ENST00000399027 KIF13BQ9NQT8 1826 aa13.54□□□□□ -0.24
CYCSP55-201ENST00000399027 USP42Q9H9J4 1324 aaKnown RBP13.54□□□□□ -0.24
CYCSP55-201ENST00000399027 ARFGEF2Q9Y6D5 1785 aa13.53□□□□□ -0.24
CYCSP55-201ENST00000399027 A0A087WZG4 1122 aa13.53□□□□□ -0.24
CYCSP55-201ENST00000399027 E9PSI1 815 aa13.53□□□□□ -0.24
CYCSP55-201ENST00000399027 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
CYCSP55-201ENST00000399027 SLFN5Q08AF3 891 aa13.53□□□□□ -0.24
CYCSP55-201ENST00000399027 PDIA6Q15084 440 aa13.53□□□□□ -0.24
CYCSP55-201ENST00000399027 LRP10Q7Z4F1 713 aa13.53□□□□□ -0.24
CYCSP55-201ENST00000399027 SPON1Q9HCB6 807 aa13.53□□□□□ -0.24
CYCSP55-201ENST00000399027 NARFQ9UHQ1 456 aa13.53□□□□□ -0.24
CYCSP55-201ENST00000399027 GYS1P13807 737 aa13.52□□□□□ -0.25
CYCSP55-201ENST00000399027 EIF2S2P20042 333 aaKnown RBP13.52□□□□□ -0.25
CYCSP55-201ENST00000399027 PTGER2P43116 358 aa13.52□□□□□ -0.25
CYCSP55-201ENST00000399027 PIP4K2AP48426 406 aaPredicted RBP13.52□□□□□ -0.25
CYCSP55-201ENST00000399027 HNRNPUQ00839 825 aaKnown RBP eCLIP13.52□□□□□ -0.25
CYCSP55-201ENST00000399027 HDGFL1Q5TGJ6 251 aa13.52□□□□□ -0.25
CYCSP55-201ENST00000399027 TRMT2AQ8IZ69 625 aaKnown RBP13.52□□□□□ -0.25
CYCSP55-201ENST00000399027 TSPYL6Q8N831 410 aa13.52□□□□□ -0.25
CYCSP55-201ENST00000399027 RGL2O15211 777 aa13.51□□□□□ -0.25
CYCSP55-201ENST00000399027 TWISTNBQ3B726 338 aaPredicted RBP13.51□□□□□ -0.25
CYCSP55-201ENST00000399027 CHMP4AQ9BY43 222 aa13.51□□□□□ -0.25
CYCSP55-201ENST00000399027 DDX21Q9NR30 783 aaKnown RBP eCLIP13.51□□□□□ -0.25
CYCSP55-201ENST00000399027 ZBED9Q6R2W3 1325 aa13.5□□□□□ -0.25
CYCSP55-201ENST00000399027 ELL2O00472 640 aaPredicted RBP13.5□□□□□ -0.25
CYCSP55-201ENST00000399027 ZPR1O75312 459 aa13.5□□□□□ -0.25
CYCSP55-201ENST00000399027 EXOSC9Q06265 439 aaKnown RBP13.5□□□□□ -0.25
CYCSP55-201ENST00000399027 USPL1Q5W0Q7 1092 aa13.5□□□□□ -0.25
CYCSP55-201ENST00000399027 DZIP3Q86Y13 1208 aaKnown RBP13.5□□□□□ -0.25
CYCSP55-201ENST00000399027 NLGN1Q8N2Q7 840 aa13.5□□□□□ -0.25
CYCSP55-201ENST00000399027 BCL2L12Q9HB09 334 aa13.5□□□□□ -0.25
CYCSP55-201ENST00000399027 DBF4Q9UBU7 674 aaPredicted RBP13.5□□□□□ -0.25
CYCSP55-201ENST00000399027 SRP68Q9UHB9 627 aaKnown RBP13.5□□□□□ -0.25
CYCSP55-201ENST00000399027 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
CYCSP55-201ENST00000399027 VAMP4O75379 141 aa13.49□□□□□ -0.25
CYCSP55-201ENST00000399027 CAMTA2O94983 1202 aa13.49□□□□□ -0.25
CYCSP55-201ENST00000399027 MYL6BP14649 208 aa13.49□□□□□ -0.25
CYCSP55-201ENST00000399027 PROSER3Q2NL68 480 aa13.49□□□□□ -0.25
CYCSP55-201ENST00000399027 NPM2Q86SE8 214 aaKnown RBP13.49□□□□□ -0.25
CYCSP55-201ENST00000399027 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
CYCSP55-201ENST00000399027 CDCA7LQ96GN5 454 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms