RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 INTS5Q6P9B9 1019 aaKnown RBP19.64■□□□□ 0.73
IGHV3-53-201ENST00000390627 AMIGO3Q86WK7 504 aa19.64■□□□□ 0.73
IGHV3-53-201ENST00000390627 EIF4A1P60842 406 aaKnown RBP19.63■□□□□ 0.73
IGHV3-53-201ENST00000390627 TRAPPC3LQ5T215 181 aa19.63■□□□□ 0.73
IGHV3-53-201ENST00000390627 LAS1LQ9Y4W2 734 aaKnown RBP19.63■□□□□ 0.73
IGHV3-53-201ENST00000390627 CHL1O00533 1208 aa19.62■□□□□ 0.73
IGHV3-53-201ENST00000390627 MIER1Q8N108 512 aa19.62■□□□□ 0.73
IGHV3-53-201ENST00000390627 NGEFQ8N5V2 710 aa19.62■□□□□ 0.73
IGHV3-53-201ENST00000390627 CFAP44Q96MT7 982 aa19.62■□□□□ 0.73
IGHV3-53-201ENST00000390627 ATF5Q9Y2D1 282 aaPredicted RBP19.62■□□□□ 0.73
IGHV3-53-201ENST00000390627 ZBTB1Q9Y2K1 713 aa19.62■□□□□ 0.73
IGHV3-53-201ENST00000390627 SOS1Q07889 1333 aaPredicted RBP19.61■□□□□ 0.73
IGHV3-53-201ENST00000390627 SMIM5Q71RC9 77 aa19.61■□□□□ 0.73
IGHV3-53-201ENST00000390627 IFT57Q9NWB7 429 aa19.61■□□□□ 0.73
IGHV3-53-201ENST00000390627 LAMB4A4D0S4 1761 aa19.6■□□□□ 0.73
IGHV3-53-201ENST00000390627 GIGYF1O75420 1035 aaPredicted RBP19.6■□□□□ 0.73
IGHV3-53-201ENST00000390627 RFC4P35249 363 aa19.6■□□□□ 0.73
IGHV3-53-201ENST00000390627 GNAI1P63096 354 aa19.6■□□□□ 0.73
IGHV3-53-201ENST00000390627 WWC1Q8IX03 1113 aa19.6■□□□□ 0.73
IGHV3-53-201ENST00000390627 ARHGEF1Q92888 912 aaKnown RBP19.6■□□□□ 0.73
IGHV3-53-201ENST00000390627 USP16Q9Y5T5 823 aa19.6■□□□□ 0.73
IGHV3-53-201ENST00000390627 PRAMEF22A3QJZ6 481 aa19.59■□□□□ 0.73
IGHV3-53-201ENST00000390627 CANXP27824 592 aaKnown RBP19.59■□□□□ 0.73
IGHV3-53-201ENST00000390627 COL15A1P39059 1388 aa19.58■□□□□ 0.73
IGHV3-53-201ENST00000390627 SENP3-EIF4A1A0A087X0R7 540 aa19.58■□□□□ 0.72
IGHV3-53-201ENST00000390627 POLD1P28340 1107 aa19.58■□□□□ 0.72
IGHV3-53-201ENST00000390627 C4AP0C0L4 1744 aa19.57■□□□□ 0.72
IGHV3-53-201ENST00000390627 A1BGP04217 495 aa19.57■□□□□ 0.72
IGHV3-53-201ENST00000390627 ZNF853P0CG23 659 aa19.57■□□□□ 0.72
IGHV3-53-201ENST00000390627 IL6STP40189 918 aaPredicted RBP19.57■□□□□ 0.72
IGHV3-53-201ENST00000390627 PTGER2P43116 358 aa19.57■□□□□ 0.72
IGHV3-53-201ENST00000390627 NPM2Q86SE8 214 aaKnown RBP19.57■□□□□ 0.72
IGHV3-53-201ENST00000390627 PPP1R1BQ9UD71 204 aaPredicted RBP19.57■□□□□ 0.72
IGHV3-53-201ENST00000390627 SALL2Q9Y467 1007 aaPredicted RBP19.57■□□□□ 0.72
IGHV3-53-201ENST00000390627 COL24A1Q17RW2 1714 aa19.56■□□□□ 0.72
IGHV3-53-201ENST00000390627 IL16Q14005 1332 aa19.56■□□□□ 0.72
IGHV3-53-201ENST00000390627 A0A087WZG4 1122 aa19.56■□□□□ 0.72
IGHV3-53-201ENST00000390627 MSL1Q68DK7 614 aa19.56■□□□□ 0.72
IGHV3-53-201ENST00000390627 SGIP1Q9BQI5 828 aa19.56■□□□□ 0.72
IGHV3-53-201ENST00000390627 MBIPQ9NS73 344 aa19.56■□□□□ 0.72
IGHV3-53-201ENST00000390627 USP42Q9H9J4 1324 aaKnown RBP19.55■□□□□ 0.72
IGHV3-53-201ENST00000390627 EIF5P55010 431 aaKnown RBP19.55■□□□□ 0.72
IGHV3-53-201ENST00000390627 ZPR1O75312 459 aa19.54■□□□□ 0.72
IGHV3-53-201ENST00000390627 WDR63Q8IWG1 891 aa19.54■□□□□ 0.72
IGHV3-53-201ENST00000390627 ZNF330Q9Y3S2 320 aaPredicted RBP19.54■□□□□ 0.72
IGHV3-53-201ENST00000390627 NLGN1Q8N2Q7 840 aa19.53■□□□□ 0.72
IGHV3-53-201ENST00000390627 ERBB4Q15303 1308 aa19.52■□□□□ 0.72
IGHV3-53-201ENST00000390627 HOXB7P09629 217 aa19.52■□□□□ 0.72
IGHV3-53-201ENST00000390627 GYS1P13807 737 aa19.52■□□□□ 0.72
IGHV3-53-201ENST00000390627 ARXQ96QS3 562 aa19.52■□□□□ 0.72
IGHV3-53-201ENST00000390627 SRP68Q9UHB9 627 aaKnown RBP19.52■□□□□ 0.72
IGHV3-53-201ENST00000390627 NARFQ9UHQ1 456 aa19.52■□□□□ 0.72
IGHV3-53-201ENST00000390627 SRCAPQ6ZRS2 3230 aa19.51■□□□□ 0.71
IGHV3-53-201ENST00000390627 PIP4K2AP48426 406 aaPredicted RBP19.51■□□□□ 0.71
IGHV3-53-201ENST00000390627 NBPF26B4DH59 902 aa19.5■□□□□ 0.71
IGHV3-53-201ENST00000390627 EIF2S2P20042 333 aaKnown RBP19.5■□□□□ 0.71
IGHV3-53-201ENST00000390627 KRT24Q2M2I5 525 aa19.5■□□□□ 0.71
IGHV3-53-201ENST00000390627 USPL1Q5W0Q7 1092 aa19.5■□□□□ 0.71
IGHV3-53-201ENST00000390627 NBPF10Q6P3W6 841 aaKnown RBP19.5■□□□□ 0.71
IGHV3-53-201ENST00000390627 NBPF15Q8N660 670 aa19.5■□□□□ 0.71
IGHV3-53-201ENST00000390627 DUSP27Q5VZP5 1158 aa19.48■□□□□ 0.71
IGHV3-53-201ENST00000390627 DZIP3Q86Y13 1208 aaKnown RBP19.48■□□□□ 0.71
IGHV3-53-201ENST00000390627 TSR2Q969E8 191 aaKnown RBP19.48■□□□□ 0.71
IGHV3-53-201ENST00000390627 SCN7AQ01118 1682 aa19.48■□□□□ 0.71
IGHV3-53-201ENST00000390627 MMP10P09238 476 aa19.47■□□□□ 0.71
IGHV3-53-201ENST00000390627 FKBP8Q14318 412 aa19.47■□□□□ 0.71
IGHV3-53-201ENST00000390627 HDGFL1Q5TGJ6 251 aa19.47■□□□□ 0.71
IGHV3-53-201ENST00000390627 TBC1D2BQ9UPU7 963 aa19.47■□□□□ 0.71
IGHV3-53-201ENST00000390627 ZNF521Q96K83 1311 aa19.47■□□□□ 0.71
IGHV3-53-201ENST00000390627 MYL6BP14649 208 aa19.46■□□□□ 0.71
IGHV3-53-201ENST00000390627 CHMP4AQ9BY43 222 aa19.46■□□□□ 0.71
IGHV3-53-201ENST00000390627 MYH16Q9H6N6 1097 aa19.46■□□□□ 0.71
IGHV3-53-201ENST00000390627 FANCIQ9NVI1 1328 aa19.46■□□□□ 0.71
IGHV3-53-201ENST00000390627 CAMTA2O94983 1202 aa19.45■□□□□ 0.7
IGHV3-53-201ENST00000390627 NECTIN2Q92692 538 aa19.45■□□□□ 0.7
IGHV3-53-201ENST00000390627 PARP3Q9Y6F1 533 aa19.45■□□□□ 0.7
IGHV3-53-201ENST00000390627 BCORQ6W2J9 1755 aa19.44■□□□□ 0.7
IGHV3-53-201ENST00000390627 RGL2O15211 777 aa19.44■□□□□ 0.7
IGHV3-53-201ENST00000390627 GOLGA2Q08379 1002 aa19.44■□□□□ 0.7
IGHV3-53-201ENST00000390627 FHDC1Q9C0D6 1143 aaPredicted RBP19.44■□□□□ 0.7
IGHV3-53-201ENST00000390627 BCL2L12Q9HB09 334 aa19.44■□□□□ 0.7
IGHV3-53-201ENST00000390627 DDX21Q9NR30 783 aaKnown RBP eCLIP19.44■□□□□ 0.7
IGHV3-53-201ENST00000390627 ZNF652Q9Y2D9 606 aa19.44■□□□□ 0.7
IGHV3-53-201ENST00000390627 ELL2O00472 640 aaPredicted RBP19.43■□□□□ 0.7
IGHV3-53-201ENST00000390627 PDIA6Q15084 440 aa19.43■□□□□ 0.7
IGHV3-53-201ENST00000390627 KIF6Q6ZMV9 814 aa19.43■□□□□ 0.7
IGHV3-53-201ENST00000390627 KLHL34Q8N239 644 aa19.43■□□□□ 0.7
IGHV3-53-201ENST00000390627 C8orf58Q8NAV2 365 aa19.43■□□□□ 0.7
IGHV3-53-201ENST00000390627 CLEC4GQ6UXB4 293 aa19.42■□□□□ 0.7
IGHV3-53-201ENST00000390627 CHPF2Q9P2E5 772 aa19.42■□□□□ 0.7
IGHV3-53-201ENST00000390627 DBF4Q9UBU7 674 aaPredicted RBP19.42■□□□□ 0.7
IGHV3-53-201ENST00000390627 TM4SF1P30408 202 aa19.41■□□□□ 0.7
IGHV3-53-201ENST00000390627 NFIXQ14938 502 aa19.41■□□□□ 0.7
IGHV3-53-201ENST00000390627 PROSER3Q2NL68 480 aa19.41■□□□□ 0.7
IGHV3-53-201ENST00000390627 TWISTNBQ3B726 338 aaPredicted RBP19.41■□□□□ 0.7
IGHV3-53-201ENST00000390627 LRP10Q7Z4F1 713 aa19.41■□□□□ 0.7
IGHV3-53-201ENST00000390627 SYT17Q9BSW7 474 aa19.41■□□□□ 0.7
IGHV3-53-201ENST00000390627 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
IGHV3-53-201ENST00000390627 MAP3K15Q6ZN16 1313 aa19.41■□□□□ 0.7
IGHV3-53-201ENST00000390627 ERVV-1B6SEH8 477 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms