RNA–Protein interactions for RNA: ENST00000390243.2

IGKV4-1-201, Transcript of immunoglobulin kappa variable 4-1, humanhuman

APPRIS P1 BASIC

Gene IGKV4-1, Length 538 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV4-1-201ENST00000390243 COL15A1P39059 1388 aa22.7■■□□□ 1.22
IGKV4-1-201ENST00000390243 USP42Q9H9J4 1324 aaKnown RBP22.69■■□□□ 1.22
IGKV4-1-201ENST00000390243 GYS1P13807 737 aa22.69■■□□□ 1.22
IGKV4-1-201ENST00000390243 POLD1P28340 1107 aa22.69■■□□□ 1.22
IGKV4-1-201ENST00000390243 PIP4K2AP48426 406 aaPredicted RBP22.69■■□□□ 1.22
IGKV4-1-201ENST00000390243 VSIG10Q8N0Z9 540 aa22.69■■□□□ 1.22
IGKV4-1-201ENST00000390243 WDR43Q15061 677 aaKnown RBP eCLIP22.68■■□□□ 1.22
IGKV4-1-201ENST00000390243 AFDNP55196 1824 aaKnown RBP22.67■■□□□ 1.22
IGKV4-1-201ENST00000390243 ADRA2BP18089 450 aa22.67■■□□□ 1.22
IGKV4-1-201ENST00000390243 TRAPPC3LQ5T215 181 aa22.67■■□□□ 1.22
IGKV4-1-201ENST00000390243 FMNL2Q96PY5 1086 aa22.67■■□□□ 1.22
IGKV4-1-201ENST00000390243 N4BP2Q86UW6 1770 aaPredicted RBP22.66■■□□□ 1.22
IGKV4-1-201ENST00000390243 SENP3-EIF4A1A0A087X0R7 540 aa22.66■■□□□ 1.22
IGKV4-1-201ENST00000390243 RIPK4P57078 832 aa22.66■■□□□ 1.22
IGKV4-1-201ENST00000390243 TRIM35Q9UPQ4 493 aa22.66■■□□□ 1.22
IGKV4-1-201ENST00000390243 A1BGP04217 495 aa22.65■■□□□ 1.22
IGKV4-1-201ENST00000390243 MMP10P09238 476 aa22.65■■□□□ 1.22
IGKV4-1-201ENST00000390243 CANXP27824 592 aaKnown RBP22.65■■□□□ 1.22
IGKV4-1-201ENST00000390243 FKBP8Q14318 412 aa22.65■■□□□ 1.22
IGKV4-1-201ENST00000390243 NEUROD2Q15784 382 aa22.65■■□□□ 1.22
IGKV4-1-201ENST00000390243 USP16Q9Y5T5 823 aa22.65■■□□□ 1.22
IGKV4-1-201ENST00000390243 NEFMP07197 916 aa22.64■■□□□ 1.21
IGKV4-1-201ENST00000390243 TAF7Q15545 349 aaPredicted RBP22.64■■□□□ 1.21
IGKV4-1-201ENST00000390243 RUNDC1Q96C34 613 aa22.64■■□□□ 1.21
IGKV4-1-201ENST00000390243 BCL2L12Q9HB09 334 aa22.64■■□□□ 1.21
IGKV4-1-201ENST00000390243 NRXN2Q9P2S2 1712 aa22.63■■□□□ 1.21
IGKV4-1-201ENST00000390243 RFC4P35249 363 aa22.63■■□□□ 1.21
IGKV4-1-201ENST00000390243 DDR1Q08345 913 aa22.63■■□□□ 1.21
IGKV4-1-201ENST00000390243 C10orf71Q711Q0 1435 aa22.63■■□□□ 1.21
IGKV4-1-201ENST00000390243 HMGB2P26583 209 aaKnown RBP22.62■■□□□ 1.21
IGKV4-1-201ENST00000390243 BRCA1P38398 1863 aaKnown RBP22.62■■□□□ 1.21
IGKV4-1-201ENST00000390243 EIF5P55010 431 aaKnown RBP22.61■■□□□ 1.21
IGKV4-1-201ENST00000390243 USPL1Q5W0Q7 1092 aa22.61■■□□□ 1.21
IGKV4-1-201ENST00000390243 PXDNLA1KZ92 1463 aa22.6■■□□□ 1.21
IGKV4-1-201ENST00000390243 PNNQ9H307 717 aaKnown RBP22.6■■□□□ 1.21
IGKV4-1-201ENST00000390243 NBPF26B4DH59 902 aa22.59■■□□□ 1.21
IGKV4-1-201ENST00000390243 EIF4A1P60842 406 aaKnown RBP22.59■■□□□ 1.21
IGKV4-1-201ENST00000390243 NBPF10Q6P3W6 841 aaKnown RBP22.59■■□□□ 1.21
IGKV4-1-201ENST00000390243 NBPF15Q8N660 670 aa22.59■■□□□ 1.21
IGKV4-1-201ENST00000390243 APAF1O14727 1248 aa22.58■■□□□ 1.21
IGKV4-1-201ENST00000390243 ANP32CO43423 234 aa22.58■■□□□ 1.21
IGKV4-1-201ENST00000390243 STARD3NLO95772 234 aa22.58■■□□□ 1.21
IGKV4-1-201ENST00000390243 WWC3Q9ULE0 1092 aa22.58■■□□□ 1.21
IGKV4-1-201ENST00000390243 KRT24Q2M2I5 525 aa22.57■■□□□ 1.2
IGKV4-1-201ENST00000390243 MRS2Q9HD23 443 aa22.57■■□□□ 1.2
IGKV4-1-201ENST00000390243 ZNF330Q9Y3S2 320 aaPredicted RBP22.57■■□□□ 1.2
IGKV4-1-201ENST00000390243 ANKRD31Q8N7Z5 1873 aa22.57■■□□□ 1.2
IGKV4-1-201ENST00000390243 CARMIL3Q8ND23 1372 aa22.56■■□□□ 1.2
IGKV4-1-201ENST00000390243 SNRPA1P09661 255 aaKnown RBP22.56■■□□□ 1.2
IGKV4-1-201ENST00000390243 PNISRQ8TF01 805 aaKnown RBP22.56■■□□□ 1.2
IGKV4-1-201ENST00000390243 NARFQ9UHQ1 456 aa22.56■■□□□ 1.2
IGKV4-1-201ENST00000390243 COL11A2P13942 1736 aaPredicted RBP22.55■■□□□ 1.2
IGKV4-1-201ENST00000390243 GIGYF1O75420 1035 aaPredicted RBP22.55■■□□□ 1.2
IGKV4-1-201ENST00000390243 YBX3P16989 372 aaKnown RBP eCLIP22.55■■□□□ 1.2
IGKV4-1-201ENST00000390243 TSPYL4Q9UJ04 414 aa22.55■■□□□ 1.2
IGKV4-1-201ENST00000390243 TBC1D2BQ9UPU7 963 aa22.55■■□□□ 1.2
IGKV4-1-201ENST00000390243 POLRMTO00411 1230 aaKnown RBP22.54■■□□□ 1.2
IGKV4-1-201ENST00000390243 NFIXQ14938 502 aa22.54■■□□□ 1.2
IGKV4-1-201ENST00000390243 NLGN1Q8N2Q7 840 aa22.54■■□□□ 1.2
IGKV4-1-201ENST00000390243 TM4SF1P30408 202 aa22.53■■□□□ 1.2
IGKV4-1-201ENST00000390243 IL6STP40189 918 aaPredicted RBP22.53■■□□□ 1.2
IGKV4-1-201ENST00000390243 TEX13AQ9BXU3 409 aaPredicted RBP22.53■■□□□ 1.2
IGKV4-1-201ENST00000390243 CD2APQ9Y5K6 639 aa22.53■■□□□ 1.2
IGKV4-1-201ENST00000390243 CAMTA2O94983 1202 aa22.52■■□□□ 1.2
IGKV4-1-201ENST00000390243 LMOD3Q0VAK6 560 aa22.52■■□□□ 1.2
IGKV4-1-201ENST00000390243 DLEC1Q9Y238 1755 aa22.52■■□□□ 1.2
IGKV4-1-201ENST00000390243 ZPR1O75312 459 aa22.51■■□□□ 1.19
IGKV4-1-201ENST00000390243 TBC1D9BQ66K14 1250 aa22.5■■□□□ 1.19
IGKV4-1-201ENST00000390243 PELP1Q8IZL8 1130 aaKnown RBP22.5■■□□□ 1.19
IGKV4-1-201ENST00000390243 CHD4Q14839 1912 aa22.5■■□□□ 1.19
IGKV4-1-201ENST00000390243 NUP98P52948 1817 aa22.5■■□□□ 1.19
IGKV4-1-201ENST00000390243 CHL1O00533 1208 aa22.48■■□□□ 1.19
IGKV4-1-201ENST00000390243 PROSER3Q2NL68 480 aa22.48■■□□□ 1.19
IGKV4-1-201ENST00000390243 BICDL1Q6ZP65 573 aa22.48■■□□□ 1.19
IGKV4-1-201ENST00000390243 DZIP3Q86Y13 1208 aaKnown RBP22.48■■□□□ 1.19
IGKV4-1-201ENST00000390243 LAS1LQ9Y4W2 734 aaKnown RBP22.48■■□□□ 1.19
IGKV4-1-201ENST00000390243 PARP3Q9Y6F1 533 aa22.48■■□□□ 1.19
IGKV4-1-201ENST00000390243 ANXA1P04083 346 aa22.47■■□□□ 1.19
IGKV4-1-201ENST00000390243 LRP10Q7Z4F1 713 aa22.47■■□□□ 1.19
IGKV4-1-201ENST00000390243 TNRC6CQ9HCJ0 1690 aaKnown RBP22.46■■□□□ 1.19
IGKV4-1-201ENST00000390243 ZNF853P0CG23 659 aa22.45■■□□□ 1.18
IGKV4-1-201ENST00000390243 TTLL7Q6ZT98 887 aa22.45■■□□□ 1.18
IGKV4-1-201ENST00000390243 CCDC24Q8N4L8 307 aa22.45■■□□□ 1.18
IGKV4-1-201ENST00000390243 NECTIN2Q92692 538 aa22.45■■□□□ 1.18
IGKV4-1-201ENST00000390243 MBIPQ9NS73 344 aa22.45■■□□□ 1.18
IGKV4-1-201ENST00000390243 A0A087WZG4 1122 aa22.44■■□□□ 1.18
IGKV4-1-201ENST00000390243 A0A0G2JLW4 131 aa22.44■■□□□ 1.18
IGKV4-1-201ENST00000390243 DPEP1P16444 411 aa22.44■■□□□ 1.18
IGKV4-1-201ENST00000390243 PDIA6Q15084 440 aa22.44■■□□□ 1.18
IGKV4-1-201ENST00000390243 GPR162Q16538 588 aa22.44■■□□□ 1.18
IGKV4-1-201ENST00000390243 ANKRD36CQ5JPF3 1778 aa22.44■■□□□ 1.18
IGKV4-1-201ENST00000390243 ARFGEF1Q9Y6D6 1849 aa22.44■■□□□ 1.18
IGKV4-1-201ENST00000390243 CACNA1SQ13698 1873 aa22.43■■□□□ 1.18
IGKV4-1-201ENST00000390243 MYL6BP14649 208 aa22.43■■□□□ 1.18
IGKV4-1-201ENST00000390243 KCNA3P22001 575 aa22.43■■□□□ 1.18
IGKV4-1-201ENST00000390243 CHRNA5P30532 468 aa22.43■■□□□ 1.18
IGKV4-1-201ENST00000390243 NGEFQ8N5V2 710 aa22.43■■□□□ 1.18
IGKV4-1-201ENST00000390243 SERPINB2P05120 415 aa22.42■■□□□ 1.18
IGKV4-1-201ENST00000390243 EIF2S2P20042 333 aaKnown RBP22.42■■□□□ 1.18
IGKV4-1-201ENST00000390243 HLFQ16534 295 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms