RNA–Protein interactions for RNA: ENST00000378913.6

DCTN3-204, Transcript of dynactin subunit 3, humanhuman

TSL 1 (best) BASIC

Gene DCTN3, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN3-204ENST00000378913 TRAPPC3LQ5T215 181 aa12.92□□□□□ -0.34
DCTN3-204ENST00000378913 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
DCTN3-204ENST00000378913 MIS18AQ9NYP9 233 aa12.92□□□□□ -0.34
DCTN3-204ENST00000378913 TRIM35Q9UPQ4 493 aa12.92□□□□□ -0.34
DCTN3-204ENST00000378913 ZBTB1Q9Y2K1 713 aa12.92□□□□□ -0.34
DCTN3-204ENST00000378913 KIF13BQ9NQT8 1826 aa12.92□□□□□ -0.34
DCTN3-204ENST00000378913 SOS1Q07889 1333 aaPredicted RBP12.91□□□□□ -0.34
DCTN3-204ENST00000378913 APAF1O14727 1248 aa12.91□□□□□ -0.34
DCTN3-204ENST00000378913 STARD3NLO95772 234 aa12.91□□□□□ -0.34
DCTN3-204ENST00000378913 POLD1P28340 1107 aa12.91□□□□□ -0.34
DCTN3-204ENST00000378913 ARXQ96QS3 562 aa12.91□□□□□ -0.34
DCTN3-204ENST00000378913 TEX13AQ9BXU3 409 aaPredicted RBP12.91□□□□□ -0.34
DCTN3-204ENST00000378913 GOLGB1Q14789 3259 aaKnown RBP12.91□□□□□ -0.34
DCTN3-204ENST00000378913 COL15A1P39059 1388 aa12.91□□□□□ -0.34
DCTN3-204ENST00000378913 AFDNP55196 1824 aaKnown RBP12.9□□□□□ -0.34
DCTN3-204ENST00000378913 PRAMEF22A3QJZ6 481 aa12.9□□□□□ -0.34
DCTN3-204ENST00000378913 RFC4P35249 363 aa12.9□□□□□ -0.34
DCTN3-204ENST00000378913 USP42Q9H9J4 1324 aaKnown RBP12.89□□□□□ -0.35
DCTN3-204ENST00000378913 SNRPA1P09661 255 aaKnown RBP12.89□□□□□ -0.35
DCTN3-204ENST00000378913 EIF4A1P60842 406 aaKnown RBP12.89□□□□□ -0.35
DCTN3-204ENST00000378913 FHDC1Q9C0D6 1143 aaPredicted RBP12.89□□□□□ -0.35
DCTN3-204ENST00000378913 USP16Q9Y5T5 823 aa12.89□□□□□ -0.35
DCTN3-204ENST00000378913 GYS1P13807 737 aa12.88□□□□□ -0.35
DCTN3-204ENST00000378913 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
DCTN3-204ENST00000378913 BABAM1Q9NWV8 329 aa12.88□□□□□ -0.35
DCTN3-204ENST00000378913 SRP68Q9UHB9 627 aaKnown RBP12.88□□□□□ -0.35
DCTN3-204ENST00000378913 TSPYL4Q9UJ04 414 aa12.88□□□□□ -0.35
DCTN3-204ENST00000378913 KIAA1551Q9HCM1 1747 aa12.88□□□□□ -0.35
DCTN3-204ENST00000378913 A1BGP04217 495 aa12.87□□□□□ -0.35
DCTN3-204ENST00000378913 EIF5P55010 431 aaKnown RBP12.87□□□□□ -0.35
DCTN3-204ENST00000378913 NUP98P52948 1817 aa12.87□□□□□ -0.35
DCTN3-204ENST00000378913 NRXN2Q9P2S2 1712 aa12.87□□□□□ -0.35
DCTN3-204ENST00000378913 UTRNP46939 3433 aa12.86□□□□□ -0.35
DCTN3-204ENST00000378913 CHL1O00533 1208 aa12.86□□□□□ -0.35
DCTN3-204ENST00000378913 GIGYF1O75420 1035 aaPredicted RBP12.86□□□□□ -0.35
DCTN3-204ENST00000378913 IL6STP40189 918 aaPredicted RBP12.86□□□□□ -0.35
DCTN3-204ENST00000378913 NLGN1Q8N2Q7 840 aa12.86□□□□□ -0.35
DCTN3-204ENST00000378913 SYT17Q9BSW7 474 aa12.86□□□□□ -0.35
DCTN3-204ENST00000378913 BRCA1P38398 1863 aaKnown RBP12.85□□□□□ -0.35
DCTN3-204ENST00000378913 N4BP2Q86UW6 1770 aaPredicted RBP12.85□□□□□ -0.35
DCTN3-204ENST00000378913 ZPR1O75312 459 aa12.85□□□□□ -0.35
DCTN3-204ENST00000378913 MMP10P09238 476 aa12.85□□□□□ -0.35
DCTN3-204ENST00000378913 USPL1Q5W0Q7 1092 aa12.85□□□□□ -0.35
DCTN3-204ENST00000378913 NARFQ9UHQ1 456 aa12.85□□□□□ -0.35
DCTN3-204ENST00000378913 PIP4K2AP48426 406 aaPredicted RBP12.84□□□□□ -0.35
DCTN3-204ENST00000378913 FKBP8Q14318 412 aa12.84□□□□□ -0.35
DCTN3-204ENST00000378913 FAM9BQ8IZU0 186 aa12.84□□□□□ -0.35
DCTN3-204ENST00000378913 CFAP44Q96MT7 982 aa12.84□□□□□ -0.35
DCTN3-204ENST00000378913 ZNF330Q9Y3S2 320 aaPredicted RBP12.84□□□□□ -0.35
DCTN3-204ENST00000378913 LAS1LQ9Y4W2 734 aaKnown RBP12.84□□□□□ -0.35
DCTN3-204ENST00000378913 A0A087WZG4 1122 aa12.83□□□□□ -0.36
DCTN3-204ENST00000378913 NBPF26B4DH59 902 aa12.83□□□□□ -0.36
DCTN3-204ENST00000378913 NBPF10Q6P3W6 841 aaKnown RBP12.83□□□□□ -0.36
DCTN3-204ENST00000378913 KLHL34Q8N239 644 aa12.83□□□□□ -0.36
DCTN3-204ENST00000378913 NBPF15Q8N660 670 aa12.83□□□□□ -0.36
DCTN3-204ENST00000378913 BCL2L12Q9HB09 334 aa12.83□□□□□ -0.36
DCTN3-204ENST00000378913 CHD4Q14839 1912 aa12.83□□□□□ -0.36
DCTN3-204ENST00000378913 C10orf71Q711Q0 1435 aa12.82□□□□□ -0.36
DCTN3-204ENST00000378913 SENP3-EIF4A1A0A087X0R7 540 aa12.82□□□□□ -0.36
DCTN3-204ENST00000378913 ZNF853P0CG23 659 aa12.82□□□□□ -0.36
DCTN3-204ENST00000378913 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
DCTN3-204ENST00000378913 CCDC27Q2M243 656 aa12.82□□□□□ -0.36
DCTN3-204ENST00000378913 NCBP3Q53F19 620 aaKnown RBP12.82□□□□□ -0.36
DCTN3-204ENST00000378913 NLGN2Q8NFZ4 835 aa12.82□□□□□ -0.36
DCTN3-204ENST00000378913 MBIPQ9NS73 344 aa12.82□□□□□ -0.36
DCTN3-204ENST00000378913 IFT57Q9NWB7 429 aa12.82□□□□□ -0.36
DCTN3-204ENST00000378913 ANKRD31Q8N7Z5 1873 aa12.82□□□□□ -0.36
DCTN3-204ENST00000378913 ANKRD36CQ5JPF3 1778 aa12.81□□□□□ -0.36
DCTN3-204ENST00000378913 GNAI1P63096 354 aa12.81□□□□□ -0.36
DCTN3-204ENST00000378913 DDR1Q08345 913 aa12.81□□□□□ -0.36
DCTN3-204ENST00000378913 KRT24Q2M2I5 525 aa12.81□□□□□ -0.36
DCTN3-204ENST00000378913 NPM2Q86SE8 214 aaKnown RBP12.81□□□□□ -0.36
DCTN3-204ENST00000378913 WWC1Q8IX03 1113 aa12.81□□□□□ -0.36
DCTN3-204ENST00000378913 TBC1D2BQ9UPU7 963 aa12.81□□□□□ -0.36
DCTN3-204ENST00000378913 CD2APQ9Y5K6 639 aa12.81□□□□□ -0.36
DCTN3-204ENST00000378913 CACNA1FO60840 1977 aa12.81□□□□□ -0.36
DCTN3-204ENST00000378913 ERBB4Q15303 1308 aa12.81□□□□□ -0.36
DCTN3-204ENST00000378913 DLEC1Q9Y238 1755 aa12.81□□□□□ -0.36
DCTN3-204ENST00000378913 CCER2I3L3R5 266 aa12.8□□□□□ -0.36
DCTN3-204ENST00000378913 POLRMTO00411 1230 aaKnown RBP12.8□□□□□ -0.36
DCTN3-204ENST00000378913 CAMTA2O94983 1202 aa12.8□□□□□ -0.36
DCTN3-204ENST00000378913 TM4SF1P30408 202 aa12.8□□□□□ -0.36
DCTN3-204ENST00000378913 DZIP3Q86Y13 1208 aaKnown RBP12.8□□□□□ -0.36
DCTN3-204ENST00000378913 PARP3Q9Y6F1 533 aa12.8□□□□□ -0.36
DCTN3-204ENST00000378913 NFIXQ14938 502 aa12.79□□□□□ -0.36
DCTN3-204ENST00000378913 DIEXFQ68CQ4 756 aaKnown RBP12.79□□□□□ -0.36
DCTN3-204ENST00000378913 ARFGEF1Q9Y6D6 1849 aa12.78□□□□□ -0.36
DCTN3-204ENST00000378913 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
DCTN3-204ENST00000378913 HOXB7P09629 217 aa12.78□□□□□ -0.36
DCTN3-204ENST00000378913 EIF2S2P20042 333 aaKnown RBP12.78□□□□□ -0.36
DCTN3-204ENST00000378913 COL11A2P13942 1736 aaPredicted RBP12.77□□□□□ -0.36
DCTN3-204ENST00000378913 ARFGEF2Q9Y6D5 1785 aa12.77□□□□□ -0.36
DCTN3-204ENST00000378913 RGL2O15211 777 aa12.77□□□□□ -0.37
DCTN3-204ENST00000378913 MYL6BP14649 208 aa12.77□□□□□ -0.37
DCTN3-204ENST00000378913 PDIA6Q15084 440 aa12.77□□□□□ -0.37
DCTN3-204ENST00000378913 PROSER3Q2NL68 480 aa12.77□□□□□ -0.37
DCTN3-204ENST00000378913 TBC1D9BQ66K14 1250 aa12.77□□□□□ -0.37
DCTN3-204ENST00000378913 LRP10Q7Z4F1 713 aa12.77□□□□□ -0.37
DCTN3-204ENST00000378913 IL16Q14005 1332 aa12.77□□□□□ -0.37
DCTN3-204ENST00000378913 CARMIL3Q8ND23 1372 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms