RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 ZCRB1Q8TBF4 217 aaKnown RBP19.25■□□□□ 0.67
SYNM-201ENST00000328642 PPRC1Q5VV67 1664 aaKnown RBP19.25■□□□□ 0.67
SYNM-201ENST00000328642 LMBR1LQ6UX01 489 aa19.25■□□□□ 0.67
SYNM-201ENST00000328642 IDH1O75874 414 aaKnown RBP19.24■□□□□ 0.67
SYNM-201ENST00000328642 SNRPA1P09661 255 aaKnown RBP19.24■□□□□ 0.67
SYNM-201ENST00000328642 TTC39AQ5SRH9 613 aa19.24■□□□□ 0.67
SYNM-201ENST00000328642 CYP46A1Q9Y6A2 500 aa19.24■□□□□ 0.67
SYNM-201ENST00000328642 NFXL1Q6ZNB6 911 aa19.24■□□□□ 0.67
SYNM-201ENST00000328642 RAB11FIP4Q86YS3 637 aa19.24■□□□□ 0.67
SYNM-201ENST00000328642 RAD21O60216 631 aa19.24■□□□□ 0.67
SYNM-201ENST00000328642 ZNF496Q96IT1 587 aaPredicted RBP19.24■□□□□ 0.67
SYNM-201ENST00000328642 A1BGP04217 495 aa19.23■□□□□ 0.67
SYNM-201ENST00000328642 LRRC2Q9BYS8 371 aa19.23■□□□□ 0.67
SYNM-201ENST00000328642 GRM8O00222 908 aa19.23■□□□□ 0.67
SYNM-201ENST00000328642 PROSER3Q2NL68 480 aa19.23■□□□□ 0.67
SYNM-201ENST00000328642 SKOR2Q2VWA4 1001 aaPredicted RBP19.23■□□□□ 0.67
SYNM-201ENST00000328642 RALYLQ86SE5 291 aaKnown RBP19.23■□□□□ 0.67
SYNM-201ENST00000328642 TBC1D2BQ9UPU7 963 aa19.23■□□□□ 0.67
SYNM-201ENST00000328642 SHROOM2Q13796 1616 aa19.23■□□□□ 0.67
SYNM-201ENST00000328642 KSR2Q6VAB6 950 aa19.22■□□□□ 0.67
SYNM-201ENST00000328642 ZGPATQ8N5A5 531 aaKnown RBP19.22■□□□□ 0.67
SYNM-201ENST00000328642 TRDNQ13061 729 aa19.22■□□□□ 0.67
SYNM-201ENST00000328642 ECHDC1Q9NTX5 307 aa19.22■□□□□ 0.67
SYNM-201ENST00000328642 USP16Q9Y5T5 823 aa19.22■□□□□ 0.67
SYNM-201ENST00000328642 SIRT2Q8IXJ6 389 aa19.22■□□□□ 0.67
SYNM-201ENST00000328642 GOLIM4O00461 696 aa19.21■□□□□ 0.67
SYNM-201ENST00000328642 KIDINS220Q9ULH0 1771 aa19.21■□□□□ 0.67
SYNM-201ENST00000328642 BLOC1S2Q6QNY1 142 aa19.21■□□□□ 0.67
SYNM-201ENST00000328642 ANO8Q9HCE9 1232 aaPredicted RBP19.21■□□□□ 0.67
SYNM-201ENST00000328642 PDRG1Q9NUG6 133 aa19.21■□□□□ 0.67
SYNM-201ENST00000328642 MPHOSPH8Q99549 860 aa19.21■□□□□ 0.67
SYNM-201ENST00000328642 TRMT112Q9UI30 125 aaKnown RBP19.21■□□□□ 0.67
SYNM-201ENST00000328642 G3V3G9 751 aa19.2■□□□□ 0.66
SYNM-201ENST00000328642 HSP90AB3PQ58FF7 597 aa19.2■□□□□ 0.66
SYNM-201ENST00000328642 METTL24Q5JXM2 366 aa19.2■□□□□ 0.66
SYNM-201ENST00000328642 CCDC158Q5M9N0 1113 aa19.2■□□□□ 0.66
SYNM-201ENST00000328642 DCAF8Q5TAQ9 597 aa19.2■□□□□ 0.66
SYNM-201ENST00000328642 ZNF790Q6PG37 636 aa19.2■□□□□ 0.66
SYNM-201ENST00000328642 IQSEC3Q9UPP2 1182 aaPredicted RBP19.2■□□□□ 0.66
SYNM-201ENST00000328642 EXOC5O00471 708 aa19.2■□□□□ 0.66
SYNM-201ENST00000328642 PTMSP20962 102 aa19.2■□□□□ 0.66
SYNM-201ENST00000328642 NECAB1Q8N987 351 aa19.2■□□□□ 0.66
SYNM-201ENST00000328642 BICC1Q9H694 974 aaKnown RBP19.2■□□□□ 0.66
SYNM-201ENST00000328642 ARAP3Q8WWN8 1544 aa19.2■□□□□ 0.66
SYNM-201ENST00000328642 STARD3NLO95772 234 aa19.19■□□□□ 0.66
SYNM-201ENST00000328642 GLI2P10070 1586 aa19.19■□□□□ 0.66
SYNM-201ENST00000328642 HAND2P61296 217 aa19.19■□□□□ 0.66
SYNM-201ENST00000328642 ABCF2Q9UG63 623 aa19.19■□□□□ 0.66
SYNM-201ENST00000328642 USP44Q9H0E7 712 aa19.19■□□□□ 0.66
SYNM-201ENST00000328642 RAB11FIP3O75154 756 aa19.19■□□□□ 0.66
SYNM-201ENST00000328642 EIF4A1P60842 406 aaKnown RBP19.19■□□□□ 0.66
SYNM-201ENST00000328642 NGLY1Q96IV0 654 aa19.19■□□□□ 0.66
SYNM-201ENST00000328642 BTG4Q9NY30 223 aa19.19■□□□□ 0.66
SYNM-201ENST00000328642 GUCY1B3Q02153 619 aa19.18■□□□□ 0.66
SYNM-201ENST00000328642 HELBQ8NG08 1087 aaPredicted RBP19.18■□□□□ 0.66
SYNM-201ENST00000328642 EDC3Q96F86 508 aaKnown RBP19.18■□□□□ 0.66
SYNM-201ENST00000328642 GSPT1P15170 499 aaKnown RBP19.18■□□□□ 0.66
SYNM-201ENST00000328642 LARP1BQ659C4 914 aaKnown RBP19.18■□□□□ 0.66
SYNM-201ENST00000328642 CHAMP1Q96JM3 812 aa19.18■□□□□ 0.66
SYNM-201ENST00000328642 ATP6V1DQ9Y5K8 247 aa19.18■□□□□ 0.66
SYNM-201ENST00000328642 NASPP49321 788 aaPredicted RBP19.18■□□□□ 0.66
SYNM-201ENST00000328642 CCDC82Q8N4S0 544 aa19.17■□□□□ 0.66
SYNM-201ENST00000328642 AXIN2Q9Y2T1 843 aa19.17■□□□□ 0.66
SYNM-201ENST00000328642 USP6P35125 1406 aa19.17■□□□□ 0.66
SYNM-201ENST00000328642 IFIT1P09914 478 aaKnown RBP19.17■□□□□ 0.66
SYNM-201ENST00000328642 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.17■□□□□ 0.66
SYNM-201ENST00000328642 ARHGAP31Q2M1Z3 1444 aa19.17■□□□□ 0.66
SYNM-201ENST00000328642 TIMM10P62072 90 aa19.17■□□□□ 0.66
SYNM-201ENST00000328642 RBM27Q9P2N5 1060 aaKnown RBP19.17■□□□□ 0.66
SYNM-201ENST00000328642 CFAP74Q9C0B2 1584 aa19.16■□□□□ 0.66
SYNM-201ENST00000328642 ESYT1Q9BSJ8 1104 aa19.16■□□□□ 0.66
SYNM-201ENST00000328642 TULP4Q9NRJ4 1543 aa19.16■□□□□ 0.66
SYNM-201ENST00000328642 PSMA5P28066 241 aa19.16■□□□□ 0.66
SYNM-201ENST00000328642 LINS1Q8NG48 757 aa19.16■□□□□ 0.66
SYNM-201ENST00000328642 ZNF594Q96JF6 807 aaPredicted RBP19.16■□□□□ 0.66
SYNM-201ENST00000328642 ALKQ9UM73 1620 aa19.15■□□□□ 0.66
SYNM-201ENST00000328642 PLEKHG1Q9ULL1 1385 aa19.15■□□□□ 0.66
SYNM-201ENST00000328642 HTATSF1O43719 755 aaKnown RBP19.15■□□□□ 0.66
SYNM-201ENST00000328642 LDHAL6AQ6ZMR3 332 aa19.15■□□□□ 0.66
SYNM-201ENST00000328642 FAM89AQ96GI7 184 aa19.15■□□□□ 0.66
SYNM-201ENST00000328642 PIBF1Q8WXW3 757 aa19.15■□□□□ 0.66
SYNM-201ENST00000328642 ADGRB3O60242 1522 aa19.14■□□□□ 0.66
SYNM-201ENST00000328642 SIRT1Q96EB6 747 aa19.14■□□□□ 0.65
SYNM-201ENST00000328642 TMX3Q96JJ7 454 aa19.14■□□□□ 0.65
SYNM-201ENST00000328642 SYCE3A1L190 88 aa19.14■□□□□ 0.65
SYNM-201ENST00000328642 CCT2P78371 535 aaKnown RBP19.14■□□□□ 0.65
SYNM-201ENST00000328642 SLC4A8Q2Y0W8 1093 aa19.14■□□□□ 0.65
SYNM-201ENST00000328642 ABCC4O15439 1325 aa19.14■□□□□ 0.65
SYNM-201ENST00000328642 IFIT5Q13325 482 aaKnown RBP19.14■□□□□ 0.65
SYNM-201ENST00000328642 ZNF853P0CG23 659 aa19.13■□□□□ 0.65
SYNM-201ENST00000328642 TFIP11Q9UBB9 837 aaKnown RBP19.13■□□□□ 0.65
SYNM-201ENST00000328642 SAMD1Q6SPF0 538 aaPredicted RBP19.13■□□□□ 0.65
SYNM-201ENST00000328642 CWC25Q9NXE8 425 aaPredicted RBP19.13■□□□□ 0.65
SYNM-201ENST00000328642 INO80Q9ULG1 1556 aaPredicted RBP19.13■□□□□ 0.65
SYNM-201ENST00000328642 KIAA2012Q0VF49 1180 aa19.13■□□□□ 0.65
SYNM-201ENST00000328642 CHST3Q7LGC8 479 aa19.13■□□□□ 0.65
SYNM-201ENST00000328642 PHF23Q9BUL5 403 aaPredicted RBP19.13■□□□□ 0.65
SYNM-201ENST00000328642 DDX21Q9NR30 783 aaKnown RBP eCLIP19.13■□□□□ 0.65
SYNM-201ENST00000328642 TMEM94Q12767 1356 aa19.12■□□□□ 0.65
SYNM-201ENST00000328642 LRRFIP1Q32MZ4 808 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms