RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 NLRP5P59047 1200 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 LEKR1Q6ZMV7 388 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 TNPO1Q92973 898 aaKnown RBP10.33□□□□□ -0.76
SSBP2-201ENST00000320672 ACBD3Q9H3P7 528 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 AFMP43652 599 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 TICAM2Q86XR7 235 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 MBD3O95983 291 aa10.32□□□□□ -0.76
SSBP2-201ENST00000320672 PRPF4BQ13523 1007 aaKnown RBP10.32□□□□□ -0.76
SSBP2-201ENST00000320672 GOLGA8AA7E2F4 631 aa10.32□□□□□ -0.76
SSBP2-201ENST00000320672 GOLGA8BA8MQT2 603 aa10.32□□□□□ -0.76
SSBP2-201ENST00000320672 PDE3AQ14432 1141 aa10.32□□□□□ -0.76
SSBP2-201ENST00000320672 DPH6Q7L8W6 267 aa10.32□□□□□ -0.76
SSBP2-201ENST00000320672 NAPBQ9H115 298 aa10.32□□□□□ -0.76
SSBP2-201ENST00000320672 PUF60Q9UHX1 559 aaKnown RBP10.32□□□□□ -0.76
SSBP2-201ENST00000320672 NOL7Q9UMY1 257 aaKnown RBP10.32□□□□□ -0.76
SSBP2-201ENST00000320672 GAPVD1Q14C86 1478 aa10.32□□□□□ -0.76
SSBP2-201ENST00000320672 GJC1P36383 396 aa10.32□□□□□ -0.76
SSBP2-201ENST00000320672 TDRD12Q587J7 1177 aaKnown RBP10.32□□□□□ -0.76
SSBP2-201ENST00000320672 TCERG1LQ5VWI1 586 aa10.32□□□□□ -0.76
SSBP2-201ENST00000320672 PUS7Q96PZ0 661 aaKnown RBP10.32□□□□□ -0.76
SSBP2-201ENST00000320672 SYNJ1O43426 1573 aa10.32□□□□□ -0.76
SSBP2-201ENST00000320672 RIMBP2O15034 1052 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 EPB41L2O43491 1005 aaKnown RBP10.31□□□□□ -0.76
SSBP2-201ENST00000320672 NGLY1Q96IV0 654 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 CDR1P51861 262 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 SP4Q02446 784 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 TMC6Q7Z403 805 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 MYO1BO43795 1136 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 ZPR1O75312 459 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 RDXP35241 583 aaKnown RBP10.31□□□□□ -0.76
SSBP2-201ENST00000320672 FSIP1Q8NA03 581 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 ZKSCAN3Q9BRR0 538 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 SLC26A6Q9BXS9 759 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 PI4KAP2A4QPH2 592 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 ESPNB1AK53 854 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 PI4KAP1Q8N8J0 262 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 NESP48681 1621 aa10.31□□□□□ -0.76
SSBP2-201ENST00000320672 ANKLE2Q86XL3 938 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 PKNOX2Q96KN3 472 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 PRKCSHP14314 528 aaPredicted RBP10.3□□□□□ -0.76
SSBP2-201ENST00000320672 MAP3K11Q16584 847 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 UBE3BQ7Z3V4 1068 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 AMOTL2Q9Y2J4 779 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 TRIM27P14373 513 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 PTGS1P23219 599 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 ZNF444Q8N0Y2 327 aaPredicted RBP10.3□□□□□ -0.76
SSBP2-201ENST00000320672 ZNF213O14771 459 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 MARCKSP29966 332 aaPredicted RBP10.3□□□□□ -0.76
SSBP2-201ENST00000320672 KIF4BQ2VIQ3 1234 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 ARHGAP29Q52LW3 1261 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 ZBTB21Q9ULJ3 1066 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 NDUFB9Q9Y6M9 179 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 CCDC191Q8NCU4 936 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 PKD2L1Q9P0L9 805 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 HIP1O00291 1037 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 MEIS3Q99687 375 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 CLIP2Q9UDT6 1046 aa10.3□□□□□ -0.76
SSBP2-201ENST00000320672 SMG6Q86US8 1419 aaKnown RBP10.3□□□□□ -0.76
SSBP2-201ENST00000320672 GOLGA6L10A0A0M3HER8 536 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 GOLGA6L10A6NI86 522 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 C8orf76Q96K31 380 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 USP16Q9Y5T5 823 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 PDCP20941 246 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 ARID5AQ03989 594 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 TMCO5BA8MYB1 307 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 KIF20AO95235 890 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 THEMISQ8N1K5 641 aaPredicted RBP10.29□□□□□ -0.76
SSBP2-201ENST00000320672 SAMM50Q9Y512 469 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 MIGA1Q8NAN2 632 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 LETM1O95202 739 aaPredicted RBP10.29□□□□□ -0.76
SSBP2-201ENST00000320672 STIM1Q13586 685 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 RNF187Q5TA31 235 aaPredicted RBP10.29□□□□□ -0.76
SSBP2-201ENST00000320672 LDHAL6AQ6ZMR3 332 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 TBC1D9Q6ZT07 1266 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 CNPY2Q9Y2B0 182 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 CACNA2D4Q7Z3S7 1137 aa10.29□□□□□ -0.76
SSBP2-201ENST00000320672 NUP88Q99567 741 aaPredicted RBP10.29□□□□□ -0.76
SSBP2-201ENST00000320672 GTF2F1P35269 517 aaKnown RBP eCLIP10.28□□□□□ -0.767e-7■■■■■ 41
SSBP2-201ENST00000320672 SLC12A7Q9Y666 1083 aa10.28□□□□□ -0.76
SSBP2-201ENST00000320672 WDR97A6NE52 1622 aa10.28□□□□□ -0.76
SSBP2-201ENST00000320672 TMEM110-MUSTN1A8MSY1 372 aa10.28□□□□□ -0.76
SSBP2-201ENST00000320672 IFIT5Q13325 482 aaKnown RBP10.28□□□□□ -0.76
SSBP2-201ENST00000320672 PDCL2Q8N4E4 241 aa10.28□□□□□ -0.76
SSBP2-201ENST00000320672 CNNM3Q8NE01 707 aa10.28□□□□□ -0.76
SSBP2-201ENST00000320672 RABEP2Q9H5N1 569 aa10.28□□□□□ -0.76
SSBP2-201ENST00000320672 MBIPQ9NS73 344 aa10.28□□□□□ -0.76
SSBP2-201ENST00000320672 CALRP27797 417 aaKnown RBP10.28□□□□□ -0.76
SSBP2-201ENST00000320672 CAVIN4Q5BKX8 364 aa10.28□□□□□ -0.76
SSBP2-201ENST00000320672 PPP1R42Q7Z4L9 355 aa10.28□□□□□ -0.76
SSBP2-201ENST00000320672 WDR63Q8IWG1 891 aa10.28□□□□□ -0.76
SSBP2-201ENST00000320672 IPO4Q8TEX9 1081 aaKnown RBP10.28□□□□□ -0.76
SSBP2-201ENST00000320672 STX17P56962 302 aa10.27□□□□□ -0.76
SSBP2-201ENST00000320672 DNAAF4Q8WXU2 420 aa10.27□□□□□ -0.76
SSBP2-201ENST00000320672 KIF1BPQ96EK5 621 aa10.27□□□□□ -0.76
SSBP2-201ENST00000320672 FAM212AQ96EL1 285 aa10.27□□□□□ -0.77
SSBP2-201ENST00000320672 STARD3NLO95772 234 aa10.27□□□□□ -0.77
SSBP2-201ENST00000320672 HCLS1P14317 486 aaPredicted RBP10.27□□□□□ -0.77
SSBP2-201ENST00000320672 DDX17Q92841 729 aaKnown RBP10.27□□□□□ -0.77
SSBP2-201ENST00000320672 BRF1Q92994 677 aa10.27□□□□□ -0.77
SSBP2-201ENST00000320672 KRT28Q7Z3Y7 464 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms