RNA–Protein interactions for RNA: ENST00000316227.3

PRIMA1-201, Transcript of proline rich membrane anchor 1, humanhuman

TSL 1 (best) BASIC

Gene PRIMA1, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIMA1-201ENST00000316227 UBR3Q6ZT12 1888 aa18.72■□□□□ 0.59
PRIMA1-201ENST00000316227 FAM9BQ8IZU0 186 aa18.72■□□□□ 0.59
PRIMA1-201ENST00000316227 TEX13AQ9BXU3 409 aaPredicted RBP18.72■□□□□ 0.59
PRIMA1-201ENST00000316227 CCDC87Q9NVE4 849 aa18.72■□□□□ 0.59
PRIMA1-201ENST00000316227 MYH14Q7Z406 1995 aaKnown RBP18.72■□□□□ 0.59
PRIMA1-201ENST00000316227 STARD3NLO95772 234 aa18.71■□□□□ 0.59
PRIMA1-201ENST00000316227 BABAM1Q9NWV8 329 aa18.71■□□□□ 0.59
PRIMA1-201ENST00000316227 SENP3-EIF4A1A0A087X0R7 540 aa18.7■□□□□ 0.58
PRIMA1-201ENST00000316227 PRAMEF22A3QJZ6 481 aa18.7■□□□□ 0.58
PRIMA1-201ENST00000316227 CCER2I3L3R5 266 aa18.7■□□□□ 0.58
PRIMA1-201ENST00000316227 SNRPA1P09661 255 aaKnown RBP18.7■□□□□ 0.58
PRIMA1-201ENST00000316227 EIF4A1P60842 406 aaKnown RBP18.7■□□□□ 0.58
PRIMA1-201ENST00000316227 ARHGEF1Q92888 912 aaKnown RBP18.7■□□□□ 0.58
PRIMA1-201ENST00000316227 CHD4Q14839 1912 aa18.69■□□□□ 0.58
PRIMA1-201ENST00000316227 CHL1O00533 1208 aa18.69■□□□□ 0.58
PRIMA1-201ENST00000316227 ADRA2BP18089 450 aa18.69■□□□□ 0.58
PRIMA1-201ENST00000316227 GPR162Q16538 588 aa18.69■□□□□ 0.58
PRIMA1-201ENST00000316227 TRAPPC3LQ5T215 181 aa18.69■□□□□ 0.58
PRIMA1-201ENST00000316227 TSPYL4Q9UJ04 414 aa18.69■□□□□ 0.58
PRIMA1-201ENST00000316227 ZBTB1Q9Y2K1 713 aa18.69■□□□□ 0.58
PRIMA1-201ENST00000316227 USP16Q9Y5T5 823 aa18.69■□□□□ 0.58
PRIMA1-201ENST00000316227 KLHL34Q8N239 644 aa18.68■□□□□ 0.58
PRIMA1-201ENST00000316227 SOS1Q07889 1333 aaPredicted RBP18.68■□□□□ 0.58
PRIMA1-201ENST00000316227 UTRNP46939 3433 aa18.68■□□□□ 0.58
PRIMA1-201ENST00000316227 GIGYF1O75420 1035 aaPredicted RBP18.67■□□□□ 0.58
PRIMA1-201ENST00000316227 C1QTNF8P60827 252 aa18.67■□□□□ 0.58
PRIMA1-201ENST00000316227 CCDC27Q2M243 656 aa18.67■□□□□ 0.58
PRIMA1-201ENST00000316227 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
PRIMA1-201ENST00000316227 MSL1Q68DK7 614 aa18.67■□□□□ 0.58
PRIMA1-201ENST00000316227 MIER1Q8N108 512 aa18.67■□□□□ 0.58
PRIMA1-201ENST00000316227 KDM3BQ7LBC6 1761 aa18.67■□□□□ 0.58
PRIMA1-201ENST00000316227 A1BGP04217 495 aa18.66■□□□□ 0.58
PRIMA1-201ENST00000316227 ZNF853P0CG23 659 aa18.66■□□□□ 0.58
PRIMA1-201ENST00000316227 CANXP27824 592 aaKnown RBP18.66■□□□□ 0.58
PRIMA1-201ENST00000316227 RFC4P35249 363 aa18.65■□□□□ 0.58
PRIMA1-201ENST00000316227 WWC1Q8IX03 1113 aa18.65■□□□□ 0.58
PRIMA1-201ENST00000316227 CFAP44Q96MT7 982 aa18.65■□□□□ 0.58
PRIMA1-201ENST00000316227 LAS1LQ9Y4W2 734 aaKnown RBP18.65■□□□□ 0.58
PRIMA1-201ENST00000316227 EIF5P55010 431 aaKnown RBP18.64■□□□□ 0.57
PRIMA1-201ENST00000316227 CALD1Q05682 793 aaKnown RBP18.64■□□□□ 0.57
PRIMA1-201ENST00000316227 PELP1Q8IZL8 1130 aaKnown RBP18.63■□□□□ 0.57
PRIMA1-201ENST00000316227 NLGN2Q8NFZ4 835 aa18.63■□□□□ 0.57
PRIMA1-201ENST00000316227 IFT57Q9NWB7 429 aa18.63■□□□□ 0.57
PRIMA1-201ENST00000316227 SRP68Q9UHB9 627 aaKnown RBP18.63■□□□□ 0.57
PRIMA1-201ENST00000316227 NBPF26B4DH59 902 aa18.62■□□□□ 0.57
PRIMA1-201ENST00000316227 GYS1P13807 737 aa18.62■□□□□ 0.57
PRIMA1-201ENST00000316227 IL6STP40189 918 aaPredicted RBP18.62■□□□□ 0.57
PRIMA1-201ENST00000316227 NBPF10Q6P3W6 841 aaKnown RBP18.62■□□□□ 0.57
PRIMA1-201ENST00000316227 NBPF15Q8N660 670 aa18.62■□□□□ 0.57
PRIMA1-201ENST00000316227 MBIPQ9NS73 344 aa18.62■□□□□ 0.57
PRIMA1-201ENST00000316227 USP42Q9H9J4 1324 aaKnown RBP18.62■□□□□ 0.57
PRIMA1-201ENST00000316227 COL15A1P39059 1388 aa18.62■□□□□ 0.57
PRIMA1-201ENST00000316227 COL24A1Q17RW2 1714 aa18.62■□□□□ 0.57
PRIMA1-201ENST00000316227 PIP4K2AP48426 406 aaPredicted RBP18.61■□□□□ 0.57
PRIMA1-201ENST00000316227 GNAI1P63096 354 aa18.61■□□□□ 0.57
PRIMA1-201ENST00000316227 KRT24Q2M2I5 525 aa18.61■□□□□ 0.57
PRIMA1-201ENST00000316227 SALL2Q9Y467 1007 aaPredicted RBP18.61■□□□□ 0.57
PRIMA1-201ENST00000316227 NLGN1Q8N2Q7 840 aa18.6■□□□□ 0.57
PRIMA1-201ENST00000316227 NARFQ9UHQ1 456 aa18.6■□□□□ 0.57
PRIMA1-201ENST00000316227 IL16Q14005 1332 aa18.58■□□□□ 0.57
PRIMA1-201ENST00000316227 A0A087WZG4 1122 aa18.58■□□□□ 0.56
PRIMA1-201ENST00000316227 ZPR1O75312 459 aa18.58■□□□□ 0.56
PRIMA1-201ENST00000316227 FKBP8Q14318 412 aa18.58■□□□□ 0.56
PRIMA1-201ENST00000316227 NGEFQ8N5V2 710 aa18.58■□□□□ 0.56
PRIMA1-201ENST00000316227 ZNF330Q9Y3S2 320 aaPredicted RBP18.58■□□□□ 0.56
PRIMA1-201ENST00000316227 C4AP0C0L4 1744 aa18.57■□□□□ 0.56
PRIMA1-201ENST00000316227 MMP10P09238 476 aa18.57■□□□□ 0.56
PRIMA1-201ENST00000316227 USPL1Q5W0Q7 1092 aa18.57■□□□□ 0.56
PRIMA1-201ENST00000316227 BCL2L12Q9HB09 334 aa18.57■□□□□ 0.56
PRIMA1-201ENST00000316227 TBC1D2BQ9UPU7 963 aa18.57■□□□□ 0.56
PRIMA1-201ENST00000316227 YBX3P16989 372 aaKnown RBP eCLIP18.56■□□□□ 0.56
PRIMA1-201ENST00000316227 WDR63Q8IWG1 891 aa18.56■□□□□ 0.56
PRIMA1-201ENST00000316227 EIF2S2P20042 333 aaKnown RBP18.55■□□□□ 0.56
PRIMA1-201ENST00000316227 PDIA6Q15084 440 aa18.55■□□□□ 0.56
PRIMA1-201ENST00000316227 ERBB4Q15303 1308 aa18.54■□□□□ 0.56
PRIMA1-201ENST00000316227 CAMTA2O94983 1202 aa18.54■□□□□ 0.56
PRIMA1-201ENST00000316227 HOXB7P09629 217 aa18.54■□□□□ 0.56
PRIMA1-201ENST00000316227 TM4SF1P30408 202 aa18.54■□□□□ 0.56
PRIMA1-201ENST00000316227 DUSP27Q5VZP5 1158 aa18.54■□□□□ 0.56
PRIMA1-201ENST00000316227 TSR2Q969E8 191 aaKnown RBP18.54■□□□□ 0.56
PRIMA1-201ENST00000316227 LAMB4A4D0S4 1761 aa18.54■□□□□ 0.56
PRIMA1-201ENST00000316227 ZNF521Q96K83 1311 aa18.53■□□□□ 0.56
PRIMA1-201ENST00000316227 DDR1Q08345 913 aa18.53■□□□□ 0.56
PRIMA1-201ENST00000316227 LRP10Q7Z4F1 713 aa18.53■□□□□ 0.56
PRIMA1-201ENST00000316227 NPM2Q86SE8 214 aaKnown RBP18.53■□□□□ 0.56
PRIMA1-201ENST00000316227 DZIP3Q86Y13 1208 aaKnown RBP18.53■□□□□ 0.56
PRIMA1-201ENST00000316227 C8orf58Q8NAV2 365 aa18.53■□□□□ 0.56
PRIMA1-201ENST00000316227 MYL6BP14649 208 aa18.52■□□□□ 0.56
PRIMA1-201ENST00000316227 PROSER3Q2NL68 480 aa18.52■□□□□ 0.56
PRIMA1-201ENST00000316227 NECTIN2Q92692 538 aa18.52■□□□□ 0.56
PRIMA1-201ENST00000316227 SPINK5Q9NQ38 1064 aaPredicted RBP18.52■□□□□ 0.56
PRIMA1-201ENST00000316227 ELL2O00472 640 aaPredicted RBP18.51■□□□□ 0.55
PRIMA1-201ENST00000316227 NFIXQ14938 502 aa18.51■□□□□ 0.55
PRIMA1-201ENST00000316227 GRIN3BO60391 1043 aa18.5■□□□□ 0.55
PRIMA1-201ENST00000316227 ANXA1P04083 346 aa18.5■□□□□ 0.55
PRIMA1-201ENST00000316227 HDGFL1Q5TGJ6 251 aa18.5■□□□□ 0.55
PRIMA1-201ENST00000316227 TTLL7Q6ZT98 887 aa18.5■□□□□ 0.55
PRIMA1-201ENST00000316227 CD2APQ9Y5K6 639 aa18.5■□□□□ 0.55
PRIMA1-201ENST00000316227 PARP3Q9Y6F1 533 aa18.5■□□□□ 0.55
PRIMA1-201ENST00000316227 POLRMTO00411 1230 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms