RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CYP19A1P11511 503 aaPredicted RBP8.52□□□□□ -1.05
CD44-204ENST00000279452 PIP4K2AP48426 406 aaPredicted RBP8.52□□□□□ -1.05
CD44-204ENST00000279452 AMIGO3Q86WK7 504 aa8.52□□□□□ -1.05
CD44-204ENST00000279452 TEX13AQ9BXU3 409 aaPredicted RBP8.52□□□□□ -1.05
CD44-204ENST00000279452 ZBTB1Q9Y2K1 713 aa8.52□□□□□ -1.05
CD44-204ENST00000279452 TAF1LQ8IZX4 1826 aa8.52□□□□□ -1.05
CD44-204ENST00000279452 TUBGCP6Q96RT7 1819 aa8.52□□□□□ -1.05
CD44-204ENST00000279452 COL5A3P25940 1745 aaPredicted RBP8.51□□□□□ -1.05
CD44-204ENST00000279452 UBR2Q8IWV8 1755 aa8.51□□□□□ -1.05
CD44-204ENST00000279452 ZNF831Q5JPB2 1677 aa8.51□□□□□ -1.05
CD44-204ENST00000279452 CCER2I3L3R5 266 aa8.51□□□□□ -1.05
CD44-204ENST00000279452 RPS6KA4O75676 772 aa8.51□□□□□ -1.05
CD44-204ENST00000279452 RC3H1Q5TC82 1133 aaKnown RBP8.51□□□□□ -1.05
CD44-204ENST00000279452 INTS5Q6P9B9 1019 aaKnown RBP8.51□□□□□ -1.05
CD44-204ENST00000279452 MIER1Q8N108 512 aa8.51□□□□□ -1.05
CD44-204ENST00000279452 SLC16A10Q8TF71 515 aa8.51□□□□□ -1.05
CD44-204ENST00000279452 LRP5O75197 1615 aa8.51□□□□□ -1.05
CD44-204ENST00000279452 CICQ96RK0 1608 aaPredicted RBP8.51□□□□□ -1.05
CD44-204ENST00000279452 COL15A1P39059 1388 aa8.5□□□□□ -1.05
CD44-204ENST00000279452 ZPR1O75312 459 aa8.5□□□□□ -1.05
CD44-204ENST00000279452 A1BGP04217 495 aa8.5□□□□□ -1.05
CD44-204ENST00000279452 EIF2S2P20042 333 aaKnown RBP8.5□□□□□ -1.05
CD44-204ENST00000279452 EIF4A1P60842 406 aaKnown RBP8.5□□□□□ -1.05
CD44-204ENST00000279452 QSER1Q2KHR3 1735 aa8.5□□□□□ -1.05
CD44-204ENST00000279452 NECTIN2Q92692 538 aa8.5□□□□□ -1.05
CD44-204ENST00000279452 ARHGEF1Q92888 912 aaKnown RBP8.5□□□□□ -1.05
CD44-204ENST00000279452 SRP68Q9UHB9 627 aaKnown RBP8.5□□□□□ -1.05
CD44-204ENST00000279452 USP16Q9Y5T5 823 aa8.5□□□□□ -1.05
CD44-204ENST00000279452 KDM3BQ7LBC6 1761 aa8.5□□□□□ -1.05
CD44-204ENST00000279452 SOS1Q07889 1333 aaPredicted RBP8.5□□□□□ -1.05
CD44-204ENST00000279452 GNAI1P63096 354 aa8.49□□□□□ -1.05
CD44-204ENST00000279452 NGEFQ8N5V2 710 aa8.49□□□□□ -1.05
CD44-204ENST00000279452 CFAP44Q96MT7 982 aa8.49□□□□□ -1.05
CD44-204ENST00000279452 IFT57Q9NWB7 429 aa8.49□□□□□ -1.05
CD44-204ENST00000279452 UBR3Q6ZT12 1888 aa8.49□□□□□ -1.05
CD44-204ENST00000279452 A0A087WZG4 1122 aa8.48□□□□□ -1.05
CD44-204ENST00000279452 GIGYF1O75420 1035 aaPredicted RBP8.48□□□□□ -1.05
CD44-204ENST00000279452 MYL6BP14649 208 aa8.48□□□□□ -1.05
CD44-204ENST00000279452 PTGER2P43116 358 aa8.48□□□□□ -1.05
CD44-204ENST00000279452 KRT24Q2M2I5 525 aa8.48□□□□□ -1.05
CD44-204ENST00000279452 USPL1Q5W0Q7 1092 aa8.48□□□□□ -1.05
CD44-204ENST00000279452 WWC1Q8IX03 1113 aa8.48□□□□□ -1.05
CD44-204ENST00000279452 TSR2Q969E8 191 aaKnown RBP8.48□□□□□ -1.05
CD44-204ENST00000279452 MBIPQ9NS73 344 aa8.48□□□□□ -1.05
CD44-204ENST00000279452 BABAM1Q9NWV8 329 aa8.48□□□□□ -1.05
CD44-204ENST00000279452 TBC1D2BQ9UPU7 963 aa8.48□□□□□ -1.05
CD44-204ENST00000279452 USP42Q9H9J4 1324 aaKnown RBP8.48□□□□□ -1.05
CD44-204ENST00000279452 ELL2O00472 640 aaPredicted RBP8.47□□□□□ -1.05
CD44-204ENST00000279452 CHL1O00533 1208 aa8.47□□□□□ -1.05
CD44-204ENST00000279452 NPHP1O15259 732 aa8.47□□□□□ -1.05
CD44-204ENST00000279452 MMP10P09238 476 aa8.47□□□□□ -1.05
CD44-204ENST00000279452 IL6STP40189 918 aaPredicted RBP8.47□□□□□ -1.05
CD44-204ENST00000279452 CCDC27Q2M243 656 aa8.47□□□□□ -1.05
CD44-204ENST00000279452 BICDL1Q6ZP65 573 aa8.47□□□□□ -1.05
CD44-204ENST00000279452 DZIP3Q86Y13 1208 aaKnown RBP8.47□□□□□ -1.05
CD44-204ENST00000279452 PARP3Q9Y6F1 533 aa8.47□□□□□ -1.05
CD44-204ENST00000279452 LAMB4A4D0S4 1761 aa8.47□□□□□ -1.05
CD44-204ENST00000279452 C4AP0C0L4 1744 aa8.46□□□□□ -1.05
CD44-204ENST00000279452 GYS1P13807 737 aa8.46□□□□□ -1.06
CD44-204ENST00000279452 EIF5P55010 431 aaKnown RBP8.46□□□□□ -1.06
CD44-204ENST00000279452 HDGFL1Q5TGJ6 251 aa8.46□□□□□ -1.06
CD44-204ENST00000279452 KIF6Q6ZMV9 814 aa8.46□□□□□ -1.06
CD44-204ENST00000279452 PELP1Q8IZL8 1130 aaKnown RBP8.46□□□□□ -1.06
CD44-204ENST00000279452 NLGN1Q8N2Q7 840 aa8.46□□□□□ -1.06
CD44-204ENST00000279452 FHDC1Q9C0D6 1143 aaPredicted RBP8.46□□□□□ -1.06
CD44-204ENST00000279452 NARFQ9UHQ1 456 aa8.46□□□□□ -1.06
CD44-204ENST00000279452 DCAF8L1A6NGE4 600 aa8.45□□□□□ -1.06
CD44-204ENST00000279452 ANXA1P04083 346 aa8.45□□□□□ -1.06
CD44-204ENST00000279452 FKBP8Q14318 412 aa8.45□□□□□ -1.06
CD44-204ENST00000279452 DUSP27Q5VZP5 1158 aa8.45□□□□□ -1.06
CD44-204ENST00000279452 SGIP1Q9BQI5 828 aa8.45□□□□□ -1.06
CD44-204ENST00000279452 ZNF652Q9Y2D9 606 aa8.45□□□□□ -1.06
CD44-204ENST00000279452 NBPF26B4DH59 902 aa8.44□□□□□ -1.06
CD44-204ENST00000279452 ZNF853P0CG23 659 aa8.44□□□□□ -1.06
CD44-204ENST00000279452 GOLGA2Q08379 1002 aa8.44□□□□□ -1.06
CD44-204ENST00000279452 AIMP1Q12904 312 aaKnown RBP8.44□□□□□ -1.06
CD44-204ENST00000279452 NBPF10Q6P3W6 841 aaKnown RBP8.44□□□□□ -1.06
CD44-204ENST00000279452 WDR63Q8IWG1 891 aa8.44□□□□□ -1.06
CD44-204ENST00000279452 NBPF15Q8N660 670 aa8.44□□□□□ -1.06
CD44-204ENST00000279452 ZBTB3Q9H5J0 574 aa8.44□□□□□ -1.06
CD44-204ENST00000279452 MYH16Q9H6N6 1097 aa8.44□□□□□ -1.06
CD44-204ENST00000279452 CHPF2Q9P2E5 772 aa8.44□□□□□ -1.06
CD44-204ENST00000279452 WWC3Q9ULE0 1092 aa8.44□□□□□ -1.06
CD44-204ENST00000279452 IL16Q14005 1332 aa8.44□□□□□ -1.06
CD44-204ENST00000279452 FANCIQ9NVI1 1328 aa8.44□□□□□ -1.06
CD44-204ENST00000279452 SCN7AQ01118 1682 aa8.43□□□□□ -1.06
CD44-204ENST00000279452 MYH14Q7Z406 1995 aaKnown RBP8.43□□□□□ -1.06
CD44-204ENST00000279452 FAM177BA6PVY3 158 aa8.43□□□□□ -1.06
CD44-204ENST00000279452 HNRNPUQ00839 825 aaKnown RBP eCLIP8.43□□□□□ -1.06
CD44-204ENST00000279452 PROSER3Q2NL68 480 aa8.43□□□□□ -1.06
CD44-204ENST00000279452 NCBP3Q53F19 620 aaKnown RBP8.43□□□□□ -1.06
CD44-204ENST00000279452 C8orf58Q8NAV2 365 aa8.43□□□□□ -1.06
CD44-204ENST00000279452 SYT17Q9BSW7 474 aa8.43□□□□□ -1.06
CD44-204ENST00000279452 ERBB4Q15303 1308 aa8.43□□□□□ -1.06
CD44-204ENST00000279452 TCERG1O14776 1098 aaKnown RBP8.42□□□□□ -1.06
CD44-204ENST00000279452 CAMTA2O94983 1202 aa8.42□□□□□ -1.06
CD44-204ENST00000279452 HOXB7P09629 217 aa8.42□□□□□ -1.06
CD44-204ENST00000279452 EXOSC9Q06265 439 aaKnown RBP8.42□□□□□ -1.06
CD44-204ENST00000279452 DDR1Q08345 913 aa8.42□□□□□ -1.06
CD44-204ENST00000279452 NFIXQ14938 502 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms