RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
RAB38-201ENST00000243662 MBIPQ9NS73 344 aa20.26■□□□□ 0.83
RAB38-201ENST00000243662 LAS1LQ9Y4W2 734 aaKnown RBP20.26■□□□□ 0.83
RAB38-201ENST00000243662 C4AP0C0L4 1744 aa20.25■□□□□ 0.83
RAB38-201ENST00000243662 GIGYF1O75420 1035 aaPredicted RBP20.25■□□□□ 0.83
RAB38-201ENST00000243662 HNRNPUQ00839 825 aaKnown RBP eCLIP20.25■□□□□ 0.83
RAB38-201ENST00000243662 PNPLA7Q6ZV29 1317 aa20.25■□□□□ 0.83
RAB38-201ENST00000243662 NEFLP07196 543 aa20.24■□□□□ 0.83
RAB38-201ENST00000243662 INTS5Q6P9B9 1019 aaKnown RBP20.24■□□□□ 0.83
RAB38-201ENST00000243662 AK7Q96M32 723 aa20.24■□□□□ 0.83
RAB38-201ENST00000243662 USP16Q9Y5T5 823 aa20.24■□□□□ 0.83
RAB38-201ENST00000243662 TFCP2L1Q9NZI6 479 aa20.24■□□□□ 0.83
RAB38-201ENST00000243662 COL24A1Q17RW2 1714 aa20.23■□□□□ 0.83
RAB38-201ENST00000243662 PDGFDQ9GZP0 370 aaPredicted RBP20.23■□□□□ 0.83
RAB38-201ENST00000243662 CCDC87Q9NVE4 849 aa20.23■□□□□ 0.83
RAB38-201ENST00000243662 GNPATO15228 680 aa20.22■□□□□ 0.83
RAB38-201ENST00000243662 RPS6KA4O75676 772 aa20.22■□□□□ 0.83
RAB38-201ENST00000243662 STARD3NLO95772 234 aa20.22■□□□□ 0.83
RAB38-201ENST00000243662 SPINK5Q9NQ38 1064 aaPredicted RBP20.22■□□□□ 0.83
RAB38-201ENST00000243662 SSFA2P28290 1259 aa20.21■□□□□ 0.83
RAB38-201ENST00000243662 KRT24Q2M2I5 525 aa20.21■□□□□ 0.83
RAB38-201ENST00000243662 ZBTB1Q9Y2K1 713 aa20.21■□□□□ 0.83
RAB38-201ENST00000243662 SMIM5Q71RC9 77 aa20.2■□□□□ 0.82
RAB38-201ENST00000243662 COL23A1Q86Y22 540 aaPredicted RBP20.2■□□□□ 0.82
RAB38-201ENST00000243662 FLAD1Q8NFF5 587 aa20.19■□□□□ 0.82
RAB38-201ENST00000243662 TSR2Q969E8 191 aaKnown RBP20.19■□□□□ 0.82
RAB38-201ENST00000243662 RTCBQ9Y3I0 505 aaKnown RBP20.19■□□□□ 0.82
RAB38-201ENST00000243662 SOS1Q07889 1333 aaPredicted RBP20.19■□□□□ 0.82
RAB38-201ENST00000243662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.18■□□□□ 0.82
RAB38-201ENST00000243662 A1BGP04217 495 aa20.18■□□□□ 0.82
RAB38-201ENST00000243662 FANCIQ9NVI1 1328 aa20.18■□□□□ 0.82
RAB38-201ENST00000243662 HOXB7P09629 217 aa20.18■□□□□ 0.82
RAB38-201ENST00000243662 ADRA2BP18089 450 aa20.18■□□□□ 0.82
RAB38-201ENST00000243662 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
RAB38-201ENST00000243662 ZBED9Q6R2W3 1325 aa20.16■□□□□ 0.82
RAB38-201ENST00000243662 NBPF26B4DH59 902 aa20.16■□□□□ 0.82
RAB38-201ENST00000243662 PHF14O94880 888 aa20.16■□□□□ 0.82
RAB38-201ENST00000243662 GOLGA2Q08379 1002 aa20.16■□□□□ 0.82
RAB38-201ENST00000243662 NBPF10Q6P3W6 841 aaKnown RBP20.16■□□□□ 0.82
RAB38-201ENST00000243662 NBPF15Q8N660 670 aa20.16■□□□□ 0.82
RAB38-201ENST00000243662 C8orf58Q8NAV2 365 aa20.16■□□□□ 0.82
RAB38-201ENST00000243662 ARHGEF1Q92888 912 aaKnown RBP20.16■□□□□ 0.82
RAB38-201ENST00000243662 COL15A1P39059 1388 aa20.15■□□□□ 0.82
RAB38-201ENST00000243662 CANXP27824 592 aaKnown RBP20.15■□□□□ 0.82
RAB38-201ENST00000243662 IL6STP40189 918 aaPredicted RBP20.15■□□□□ 0.82
RAB38-201ENST00000243662 FKBP8Q14318 412 aa20.15■□□□□ 0.82
RAB38-201ENST00000243662 DUSP27Q5VZP5 1158 aa20.15■□□□□ 0.82
RAB38-201ENST00000243662 SLC16A10Q8TF71 515 aa20.15■□□□□ 0.82
RAB38-201ENST00000243662 BCORQ6W2J9 1755 aa20.14■□□□□ 0.82
RAB38-201ENST00000243662 TRAPPC3LQ5T215 181 aa20.14■□□□□ 0.81
RAB38-201ENST00000243662 ERBB4Q15303 1308 aa20.14■□□□□ 0.81
RAB38-201ENST00000243662 SCN7AQ01118 1682 aa20.13■□□□□ 0.81
RAB38-201ENST00000243662 PIP4K2AP48426 406 aaPredicted RBP20.13■□□□□ 0.81
RAB38-201ENST00000243662 SLFN5Q08AF3 891 aa20.13■□□□□ 0.81
RAB38-201ENST00000243662 TSPYL6Q8N831 410 aa20.13■□□□□ 0.81
RAB38-201ENST00000243662 MYH16Q9H6N6 1097 aa20.13■□□□□ 0.81
RAB38-201ENST00000243662 LRP5O75197 1615 aa20.13■□□□□ 0.81
RAB38-201ENST00000243662 TRMT2AQ8IZ69 625 aaKnown RBP20.12■□□□□ 0.81
RAB38-201ENST00000243662 CACNA1FO60840 1977 aa20.12■□□□□ 0.81
RAB38-201ENST00000243662 E9PSI1 815 aa20.11■□□□□ 0.81
RAB38-201ENST00000243662 EIF2S2P20042 333 aaKnown RBP20.11■□□□□ 0.81
RAB38-201ENST00000243662 PDIA6Q15084 440 aa20.11■□□□□ 0.81
RAB38-201ENST00000243662 LRP10Q7Z4F1 713 aa20.11■□□□□ 0.81
RAB38-201ENST00000243662 CDCA7LQ96GN5 454 aa20.11■□□□□ 0.81
RAB38-201ENST00000243662 ELL2O00472 640 aaPredicted RBP20.11■□□□□ 0.81
RAB38-201ENST00000243662 MTFR1LQ9H019 292 aa20.11■□□□□ 0.81
RAB38-201ENST00000243662 MSH5O43196 834 aa20.1■□□□□ 0.81
RAB38-201ENST00000243662 ZBTB7AO95365 584 aa20.1■□□□□ 0.81
RAB38-201ENST00000243662 EXOSC9Q06265 439 aaKnown RBP20.1■□□□□ 0.81
RAB38-201ENST00000243662 ERICH6BQ5W0A0 696 aa20.1■□□□□ 0.81
RAB38-201ENST00000243662 USP42Q9H9J4 1324 aaKnown RBP20.1■□□□□ 0.81
RAB38-201ENST00000243662 RFC4P35249 363 aa20.09■□□□□ 0.81
RAB38-201ENST00000243662 TWISTNBQ3B726 338 aaPredicted RBP20.09■□□□□ 0.81
RAB38-201ENST00000243662 HDGFL1Q5TGJ6 251 aa20.09■□□□□ 0.81
RAB38-201ENST00000243662 SGIP1Q9BQI5 828 aa20.09■□□□□ 0.81
RAB38-201ENST00000243662 PROSER3Q2NL68 480 aa20.08■□□□□ 0.81
RAB38-201ENST00000243662 NECTIN2Q92692 538 aa20.08■□□□□ 0.81
RAB38-201ENST00000243662 SRP68Q9UHB9 627 aaKnown RBP20.08■□□□□ 0.81
RAB38-201ENST00000243662 NARFQ9UHQ1 456 aa20.08■□□□□ 0.81
RAB38-201ENST00000243662 NUP98P52948 1817 aa20.07■□□□□ 0.8
RAB38-201ENST00000243662 A0A087WZG4 1122 aa20.07■□□□□ 0.8
RAB38-201ENST00000243662 GYS1P13807 737 aa20.07■□□□□ 0.8
RAB38-201ENST00000243662 DDX21Q9NR30 783 aaKnown RBP eCLIP20.07■□□□□ 0.8
RAB38-201ENST00000243662 VAMP4O75379 141 aa20.06■□□□□ 0.8
RAB38-201ENST00000243662 PTGER2P43116 358 aa20.06■□□□□ 0.8
RAB38-201ENST00000243662 SPON1Q9HCB6 807 aa20.06■□□□□ 0.8
RAB38-201ENST00000243662 CHPF2Q9P2E5 772 aa20.06■□□□□ 0.8
RAB38-201ENST00000243662 ATF5Q9Y2D1 282 aaPredicted RBP20.06■□□□□ 0.8
RAB38-201ENST00000243662 ZNF330Q9Y3S2 320 aaPredicted RBP20.06■□□□□ 0.8
RAB38-201ENST00000243662 ANXA1P04083 346 aa20.05■□□□□ 0.8
RAB38-201ENST00000243662 MYL6BP14649 208 aa20.05■□□□□ 0.8
RAB38-201ENST00000243662 BCL2L12Q9HB09 334 aa20.05■□□□□ 0.8
RAB38-201ENST00000243662 DBF4Q9UBU7 674 aaPredicted RBP20.05■□□□□ 0.8
RAB38-201ENST00000243662 TBC1D2BQ9UPU7 963 aa20.05■□□□□ 0.8
RAB38-201ENST00000243662 CAMTA2O94983 1202 aa20.05■□□□□ 0.8
RAB38-201ENST00000243662 USPL1Q5W0Q7 1092 aa20.05■□□□□ 0.8
RAB38-201ENST00000243662 DZIP3Q86Y13 1208 aaKnown RBP20.05■□□□□ 0.8
RAB38-201ENST00000243662 ZPR1O75312 459 aa20.04■□□□□ 0.8
RAB38-201ENST00000243662 CCDC30Q5VVM6 783 aa20.04■□□□□ 0.8
RAB38-201ENST00000243662 MSL1Q68DK7 614 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms