RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Pms1Q8K119 917 aa11.17□□□□□ -0.62
Ldlr-202ENSMUST00000213114 GckrQ91X44 587 aa11.17□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Depdc5P61460 1591 aa11.17□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Kif3aP28741 701 aa11.17□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Lmbr1lQ9D1E5 489 aa11.17□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Pde4bB1AWC9 736 aa11.16□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Hoxc9P09633 260 aa11.16□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Ppfia3P60469 1194 aa11.16□□□□□ -0.62
Ldlr-202ENSMUST00000213114 4931400O07RikQ9D4M5 137 aa11.16□□□□□ -0.62
Ldlr-202ENSMUST00000213114 AnkarA2RT91 1465 aa11.16□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Nlrp3Q8R4B8 1033 aa11.16□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Med4Q9CQA5 270 aa11.16□□□□□ -0.62
Ldlr-202ENSMUST00000213114 F2rP30558 430 aa11.16□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Kif20aP97329 887 aa11.16□□□□□ -0.62
Ldlr-202ENSMUST00000213114 VeztQ3ZK22 780 aa11.16□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Ddx19aQ61655 478 aaKnown RBP11.16□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Ccdc66Q6NS45 935 aa11.16□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Kif21bQ9QXL1 1668 aa11.15□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Setbp1Q9Z180 1582 aa11.15□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Chd1P40201 1711 aa11.15□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Ppfia1B2RXQ2 1266 aa11.15□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Bloc1s4Q8VED2 215 aa11.15□□□□□ -0.62
Ldlr-202ENSMUST00000213114 RestQ8VIG1 1082 aa11.15□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Stx6Q9JKK1 255 aa11.15□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Kiaa1210E9Q0C6 1637 aa11.15□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Myo3aQ8K3H5 1613 aa11.15□□□□□ -0.62
Ldlr-202ENSMUST00000213114 Ddx58Q6Q899 926 aa11.15□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Ncbp3Q8BZR9 615 aaKnown RBP11.15□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Slc5a4bQ91ZP4 660 aa11.15□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Nckap5lQ6GQX2 1323 aa11.15□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Prl7d1P04769 244 aa11.14□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Hap1O35668 628 aa11.14□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Ier5O89113 308 aa11.14□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Grm8P47743 908 aa11.14□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Drc7Q6V3W6 876 aa11.14□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Jmjd4Q8BFT6 427 aa11.14□□□□□ -0.63
Ldlr-202ENSMUST00000213114 AidaQ8C4Q6 305 aa11.14□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Abca8bQ8K440 1620 aa11.14□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Myd88P22366 296 aa11.14□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Mrps27Q8BK72 415 aaKnown RBP11.14□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Fsd2Q8BZ52 692 aa11.14□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Fam184aE9PW83 1143 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 EappQ5BU09 281 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Tmem67Q8BR76 992 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Golim4Q8BXA1 655 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Klc3Q91W40 508 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Tbc1d7Q9D0K0 293 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Gdpd2Q9ESM6 539 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Rcan3Q9JKK0 239 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Ttc41Q692V3 1318 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Atg4a-psA0A0G2JFS9 396 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Zbtb45Q52KG4 520 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Ddx46Q569Z5 1032 aaKnown RBP11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Atg4aQ8C9S8 396 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Tpm3P21107 285 aaKnown RBP11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Exoc5Q3TPX4 708 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Gnat3Q3V3I2 354 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Fam13bQ8K2H3 851 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Ppp6r3Q922D4 844 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 ZwintQ9CQU5 252 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Rbm27Q5SFM8 1060 aaKnown RBP11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Ankle2Q6P1H6 964 aa11.13□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Mmp8O70138 465 aa11.12□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Gadd45bP22339 160 aa11.12□□□□□ -0.63
Ldlr-202ENSMUST00000213114 TbcaP48428 108 aaKnown RBP11.12□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Cct2P80314 535 aaKnown RBP11.12□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Taf3Q5HZG4 932 aa11.12□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Ccdc178Q8CDV0 866 aa11.12□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Taf7Q9R1C0 341 aa11.12□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Pmfbp1Q9WVQ0 1022 aa11.12□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Yeats2Q3TUF7 1407 aa11.12□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Rufy2Q8R4C2 606 aa11.12□□□□□ -0.63
Ldlr-202ENSMUST00000213114 UvssaQ9D479 717 aa11.12□□□□□ -0.63
Ldlr-202ENSMUST00000213114 DmtnQ9WV69 405 aa11.12□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Nos1Q9Z0J4 1429 aa11.12□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Zkscan16A2ALW2 728 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Tmem87bQ8BKU8 555 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Slc39a6Q8C145 765 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Atf7Q8R0S1 413 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Nop14Q8R3N1 860 aaKnown RBP11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Kri1Q8VDQ9 704 aaKnown RBP11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Gigyf1Q99MR1 1044 aaKnown RBP11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Rbm8a2A0A0N4SUH6 174 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Cfap58B2RW38 873 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Tpm1P58771 284 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Igflr1Q3U4N7 345 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Rbm8aQ9CWZ3 174 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Uggt2E9Q4X2 1504 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Zfyve16Q80U44 1528 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Ehmt1Q5DW34 1296 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Uhrf1bp1lA2RSJ4 1457 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Tpx2A2APB8 745 aaKnown RBP11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Tom1O88746 492 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Slain2Q8CI08 581 aa11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Nsfl1cQ9CZ44 370 aaKnown RBP11.11□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Abcc3B2RX12 1523 aa11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Bicc1Q99MQ1 977 aaKnown RBP11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Trpm2Q91YD4 1506 aa11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Rbbp8nlA2ABX0 614 aa11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Tm6sf1P58749 370 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms