RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Col15a1O35206 1367 aa12.79□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Anapc15-psA0A140T8L6 141 aa12.79□□□□□ -0.36
Ptpre-208ENSMUST00000211788 NcapgE9PWG6 1004 aa12.79□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Bcar3Q9QZK2 820 aa12.79□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Stk36Q69ZM6 1316 aa12.79□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Col1a2Q01149 1372 aa12.79□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Pdia3P27773 505 aaKnown RBP12.79□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Rfx1P48377 963 aa12.79□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Atp8b2P98199 1209 aa12.79□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Ppp6r3Q922D4 844 aa12.79□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Mmp8O70138 465 aa12.78□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Ccdc155Q80VJ8 648 aa12.78□□□□□ -0.36
Ptpre-208ENSMUST00000211788 OptnQ8K3K8 584 aa12.78□□□□□ -0.36
Ptpre-208ENSMUST00000211788 TkfcQ8VC30 578 aa12.78□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Exoc6bA6H5Z3 810 aa12.78□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Wdr78E9PYY5 807 aa12.78□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Fez2Q6TYB5 348 aa12.78□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Gli3Q61602 1583 aa12.78□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Simc1E9Q6E9 1354 aa12.77□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Chrm1P12657 460 aa12.77□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Kif3aP28741 701 aa12.77□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Ppip5k2Q6ZQB6 1129 aa12.77□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Q9D2X8 372 aa12.77□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Wnk3Q80XP9 1757 aa12.77□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Zap70P43404 618 aa12.77□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Nucb1Q02819 459 aaKnown RBP12.77□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Pip4k2bQ80XI4 416 aa12.77□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Rapgef3Q8VCC8 918 aa12.77□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Nsfl1cQ9CZ44 370 aaKnown RBP12.77□□□□□ -0.37
Ptpre-208ENSMUST00000211788 CrklP47941 303 aa12.76□□□□□ -0.37
Ptpre-208ENSMUST00000211788 CalcaP70160 136 aa12.76□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Echdc1Q9D9V3 322 aa12.76□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Col18a1P39061 1774 aa12.76□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Zranb3Q6NZP1 1069 aa12.76□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Pdzd9Q9D9M4 266 aa12.76□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Spryd3E9Q9B3 442 aa12.75□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Mphosph10Q810V0 681 aaKnown RBP12.75□□□□□ -0.37
Ptpre-208ENSMUST00000211788 ThemisQ8BGW0 636 aa12.75□□□□□ -0.37
Ptpre-208ENSMUST00000211788 GckrQ91X44 587 aa12.75□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Cfdp1O88271 295 aaKnown RBP12.74□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Hmox1P14901 289 aa12.74□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Map3k13Q1HKZ5 959 aa12.74□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Ptpdc1Q6NZK8 747 aa12.74□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Bend3Q6PAL0 825 aa12.74□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Zkscan2G3X952 960 aa12.74□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Tlr7P58681 1050 aa12.74□□□□□ -0.37
Ptpre-208ENSMUST00000211788 PsapQ61207 557 aaKnown RBP12.74□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Chmp7Q8R1T1 451 aa12.74□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Mcmdc2E9Q956 681 aa12.73□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Ier5O89113 308 aa12.73□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Card10P58660 1021 aa12.73□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Stk11ipQ3TAA7 1072 aa12.73□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Slc4a10Q5DTL9 1118 aa12.73□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Fam50bQ9WTJ8 334 aa12.73□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Adcy9P51830 1353 aa12.73□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Map7d2A2AG50 781 aa12.73□□□□□ -0.37
Ptpre-208ENSMUST00000211788 SlkO54988 1233 aa12.73□□□□□ -0.37
Ptpre-208ENSMUST00000211788 MsnP26041 577 aaKnown RBP12.73□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Prune1Q8BIW1 454 aa12.73□□□□□ -0.37
Ptpre-208ENSMUST00000211788 RestQ8VIG1 1082 aa12.73□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Map3k2Q61083 619 aa12.72□□□□□ -0.37
Ptpre-208ENSMUST00000211788 1700010I14RikQ7TPG0 532 aa12.72□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Amigo3Q8C2S7 508 aa12.72□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Atg3Q9CPX6 314 aa12.72□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Fam114a1Q9D281 569 aa12.72□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Atp10bB1AWN4 1474 aa12.72□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Erc2Q6PH08 957 aa12.72□□□□□ -0.37
Ptpre-208ENSMUST00000211788 EngaseQ8BX80 734 aa12.72□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Phkg2Q9DB30 406 aa12.72□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Scn4aQ9ER60 1841 aa12.72□□□□□ -0.37
Ptpre-208ENSMUST00000211788 SympkQ80X82 1284 aa12.71□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Tmem119Q8R138 280 aa12.71□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Kdm4cQ8VCD7 1054 aa12.71□□□□□ -0.37
Ptpre-208ENSMUST00000211788 Taf7Q9R1C0 341 aa12.71□□□□□ -0.38
Ptpre-208ENSMUST00000211788 BcorQ8CGN4 1759 aa12.7□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Arhgap4B1AUY3 965 aa12.7□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Zfp251Q6PCX8 632 aa12.7□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Ercc6lQ8BHK9 1240 aa12.7□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Hsp90b1P08113 802 aaKnown RBP12.7□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Rsph3aQ3UFY4 516 aa12.7□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Irf9Q61179 399 aa12.7□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Flt4P35917 1363 aa12.69□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Elp1Q7TT37 1333 aaKnown RBP12.69□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Tpx2A2APB8 745 aaKnown RBP12.69□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Grpel1Q99LP6 217 aa12.69□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Dmrtc1Q9D9R7 182 aa12.69□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Mrvi1Q9WUX5 899 aaKnown RBP12.69□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Trap1aP19473 224 aa12.68□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Glipr1l2Q9CQ35 332 aa12.68□□□□□ -0.38
Ptpre-208ENSMUST00000211788 RgmbQ7TQ33 436 aa12.68□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Tceal9Q9DD24 104 aa12.68□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Cnnm1Q0GA42 951 aa12.67□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Tgfb1i1Q62219 461 aa12.67□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Pdia6Q922R8 440 aaKnown RBP12.67□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Tns2Q8CGB6 1400 aa12.67□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Plcb2A3KGF7 1181 aa12.67□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Asic4Q7TNS7 539 aa12.67□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Fam13bQ8K2H3 851 aa12.67□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Igfbp6P47880 238 aa12.66□□□□□ -0.38
Ptpre-208ENSMUST00000211788 Iqsec3Q3TES0 1195 aa12.66□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 452 ms