RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 En2P09066 324 aa17.75■□□□□ 0.43
Ercc1-203ENSMUST00000160369 PsdQ5DTT2 1024 aa17.75■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Ankle2Q6P1H6 964 aa17.74■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Col23a1Q8K4G2 532 aa17.74■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Magea1O89006 320 aa17.73■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Magea5O89009 320 aa17.73■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Esco1Q69Z69 843 aa17.73■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Nlrp3Q8R4B8 1033 aa17.73■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Trim26Q99PN3 545 aa17.73■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Magea2Q9R2A2 320 aa17.73■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Slf2Q6P9P0 1278 aa17.72■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Ccdc60Q8C4J0 545 aa17.72■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Emilin1Q99K41 1017 aa17.72■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Mtfr1lQ9CWE0 289 aa17.72■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Sned1Q70E20 1403 aa17.72■□□□□ 0.43
Ercc1-203ENSMUST00000160369 BcorQ8CGN4 1759 aa17.71■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Strn4P58404 760 aa17.71■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Wdhd1P59328 1117 aa17.71■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Gas2l2Q5SSG4 860 aa17.71■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Sv2bQ8BG39 683 aa17.71■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Polr3glQ8R0C0 218 aa17.71■□□□□ 0.43
Ercc1-203ENSMUST00000160369 KarsQ99MN1 595 aaKnown RBP17.71■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Pcgf6Q99NA9 353 aa17.71■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Trip6Q9Z1Y4 480 aa17.71■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Chl1P70232 1209 aa17.7■□□□□ 0.42
Ercc1-203ENSMUST00000160369 CoilQ5SU73 570 aa17.7■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Slfnl1Q8BHW9 410 aa17.7■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Kcnq2Q9Z351 759 aa17.7■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Col11a2Q64739 1736 aa17.69■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Cavin2Q63918 418 aaKnown RBP17.69■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Srp68Q8BMA6 625 aaKnown RBP17.69■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Ubn2Q80WC1 1314 aa17.69■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Plch1Q4KWH5 1682 aa17.68■□□□□ 0.42
Ercc1-203ENSMUST00000160369 G3bp1P97855 465 aaKnown RBP17.68■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Echdc1Q9D9V3 322 aa17.68■□□□□ 0.42
Ercc1-203ENSMUST00000160369 NgdnQ9DB96 315 aaKnown RBP17.68■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Ddx60E9PZQ1 1711 aa17.67■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Prom2Q3UUY6 835 aa17.67■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Irf9Q61179 399 aa17.67■□□□□ 0.42
Ercc1-203ENSMUST00000160369 SowahdQ8BY98 327 aa17.67■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Lama4P97927 1816 aa17.66■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Ttll7A4Q9F0 912 aa17.66■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Tlr8P58682 1032 aa17.66■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Snai1Q02085 264 aa17.66■□□□□ 0.42
Ercc1-203ENSMUST00000160369 CpzQ8R4V4 654 aa17.66■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Trim34aQ99PP6 485 aa17.66■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Col4a1P02463 1669 aa17.66■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Prdm11A2AGX3 565 aa17.65■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Ifit1bl2Q3U687 466 aa17.65■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Plekhm2Q80TQ5 1018 aa17.65■□□□□ 0.42
Ercc1-203ENSMUST00000160369 ScaperF8VQ70 1398 aaKnown RBP17.65■□□□□ 0.42
Ercc1-203ENSMUST00000160369 Fam83gQ5SWY7 812 aa17.64■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Zbtb40Q6PCS8 1258 aa17.64■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Ppm1fQ8CGA0 452 aa17.64■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Fkbp1aP26883 108 aaKnown RBP17.63■□□□□ 0.41
Ercc1-203ENSMUST00000160369 1810065E05RikQ5NC41 235 aa17.63■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Tmco5bQ80X59 307 aa17.63■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Egfem1Q8C088 590 aa17.63■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Znrd1-asQ8R0E5 213 aa17.63■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Igfbp6P47880 238 aa17.62■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Gimap8Q75N62 688 aa17.62■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Mapk8ip1Q9WVI9 707 aa17.62■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Flt4P35917 1363 aa17.62■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Cfap70D3YVL2 1141 aa17.61■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Zc3h12cQ5DTV4 884 aa17.61■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Pde4bB1AWC9 736 aa17.6■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Ubxn2bQ0KL01 331 aa17.6■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Ddx58Q6Q899 926 aa17.6■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Bicc1Q99MQ1 977 aaKnown RBP17.6■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Sipa1l3G3X9J0 1776 aa17.59■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Ssc5dQ8BV57 1371 aa17.59■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Upf2A2AT37 1269 aaKnown RBP17.59■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Rangap1P46061 589 aaKnown RBP17.59■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Ankib1Q6ZPS6 1085 aa17.59■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Tktl2Q9D4D4 627 aa17.59■□□□□ 0.41
Ercc1-203ENSMUST00000160369 Npy5rO70342 466 aa17.58■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Hsp90ab1P11499 724 aaKnown RBP17.58■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Aplp1Q03157 653 aa17.58■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Map3k2Q61083 619 aa17.58■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Arid3aQ62431 601 aa17.58■□□□□ 0.4
Ercc1-203ENSMUST00000160369 AbraQ8BUZ1 375 aa17.58■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Disp3A3KFU9 1347 aa17.57■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Stox1B2RQL2 990 aa17.57■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Magea6O89010 325 aa17.57■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Nectin2P32507 530 aa17.57■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Rtkn2Q14B46 604 aa17.57■□□□□ 0.4
Ercc1-203ENSMUST00000160369 MarsQ68FL6 902 aaKnown RBP17.57■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Magea3Q6T340 320 aa17.57■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Hirip3Q8BLH7 601 aa17.57■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Ambra1A2AH22 1300 aa17.56■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Cyp2d11P24457 504 aa17.56■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Tgfb2P27090 414 aa17.56■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Eif4g2Q62448 906 aaKnown RBP17.56■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Fkbp5Q64378 456 aa17.56■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Ttc41Q692V3 1318 aa17.55■□□□□ 0.4
Ercc1-203ENSMUST00000160369 CltaO08585 235 aa17.55■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Dctn1O08788 1281 aa17.55■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Adam1aQ60813 791 aa17.55■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Ric3Q8BPM6 367 aa17.55■□□□□ 0.4
Ercc1-203ENSMUST00000160369 St5Q924W7 1134 aa17.55■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms