RNA–Protein interactions for RNA: ENSMUST00000119896.1

Ssr3-202, Transcript of Translocon-associated protein subunit gamma, mousemouse

TSL 1 (best) BASIC

Gene Ssr3, Length 1,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-202ENSMUST00000119896 Gm2244L7N2A3 218 aa12.32□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Gm3278L7N2D2 218 aa12.32□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Gm8271L7N2E2 218 aa12.32□□□□□ -0.44
Ssr3-202ENSMUST00000119896 SobpQ0P5V2 864 aa12.32□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Spire2Q8K1S6 718 aa12.32□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Itgb4A2A863 1818 aa12.31□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Col4a5Q63ZW6 1691 aa12.31□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Gm12185Q5NCB2 835 aa12.31□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Cd248Q91V98 765 aa12.31□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Rapgef4Q9EQZ6 1011 aa12.31□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Prr5lA2AVJ5 370 aa12.3□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Atf5O70191 283 aa12.3□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Rbm46P86049 533 aa12.3□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Btbd11Q6GQW0 1109 aa12.3□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Ppp2r1aQ76MZ3 589 aa12.3□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Tcerg1Q8CGF7 1100 aaKnown RBP12.3□□□□□ -0.44
Ssr3-202ENSMUST00000119896 CfhP06909 1234 aa12.29□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Unc5clQ6R653 518 aa12.29□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Pdzph1Q8BGR1 1238 aa12.29□□□□□ -0.44
Ssr3-202ENSMUST00000119896 NpcdF8VQB8 469 aa12.28□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Snai1Q02085 264 aa12.28□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Arid3aQ62431 601 aa12.28□□□□□ -0.44
Ssr3-202ENSMUST00000119896 U2af1Q9D883 239 aaKnown RBP12.28□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Esco1Q69Z69 843 aa12.27□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Ptcd1Q8C2E4 695 aaKnown RBP12.27□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Nlrp6Q91WS2 869 aa12.27□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Gigyf1Q99MR1 1044 aaKnown RBP12.27□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Iqcf3Q9D498 203 aa12.27□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Irx6Q9ER75 438 aa12.27□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Stk32bQ9JJX8 414 aa12.27□□□□□ -0.44
Ssr3-202ENSMUST00000119896 Col5a2Q3U962 1497 aa12.27□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Rtf1A2AQ19 715 aaKnown RBP12.27□□□□□ -0.45
Ssr3-202ENSMUST00000119896 NefmP08553 848 aa12.27□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Cnnm1Q0GA42 951 aa12.27□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Col4a1P02463 1669 aa12.26□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Setdb1O88974 1307 aa12.26□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Slf2Q6P9P0 1278 aa12.26□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Flad1Q8R123 492 aa12.26□□□□□ -0.45
Ssr3-202ENSMUST00000119896 GsdmaQ9EST1 446 aa12.26□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Usp19Q3UJD6 1360 aa12.26□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Prr29B1ARI9 187 aa12.25□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Ppp1r3fQ9JIG4 799 aa12.25□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Aebp2Q9Z248 504 aaKnown RBP12.25□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Col24a1Q30D77 1733 aa12.24□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Dusp27Q148W8 1138 aa12.24□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Znf428Q8C1M2 176 aa12.24□□□□□ -0.45
Ssr3-202ENSMUST00000119896 St5Q924W7 1134 aa12.24□□□□□ -0.45
Ssr3-202ENSMUST00000119896 TefQ9JLC6 301 aa12.24□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Golgb1E9PVZ8 3238 aa12.24□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Olfr247E9PVJ7 320 aa12.23□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Olfr819K7N727 320 aa12.23□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Cers3Q1A3B0 383 aa12.23□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Iqsec3Q3TES0 1195 aa12.23□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Q4VA45 678 aa12.23□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Prkab2Q6PAM0 271 aa12.23□□□□□ -0.45
Ssr3-202ENSMUST00000119896 DaglaQ6WQJ1 1044 aa12.23□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Rasgrp4Q8BTM9 673 aa12.22□□□□□ -0.45
Ssr3-202ENSMUST00000119896 SowahdQ8BY98 327 aa12.22□□□□□ -0.45
Ssr3-202ENSMUST00000119896 NgdnQ9DB96 315 aaKnown RBP12.22□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Ddx60E9PZQ1 1711 aa12.22□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Thrap3Q569Z6 951 aaKnown RBP12.21□□□□□ -0.45
Ssr3-202ENSMUST00000119896 Cyp2c23E9Q5K4 494 aa12.21□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Prim1P20664 417 aa12.21□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Ifit1bl2Q3U687 466 aa12.21□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Fhdc1Q3ULZ2 1149 aa12.21□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Dpf2Q61103 391 aaKnown RBP12.21□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Slc39a6Q8C145 765 aa12.21□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Ptf1aQ9QX98 324 aa12.21□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Mrc1Q61830 1456 aa12.2□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Ppp1r1bQ60829 194 aa12.2□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Soga3Q6NZL0 945 aa12.2□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Pdia6Q922R8 440 aaKnown RBP12.2□□□□□ -0.46
Ssr3-202ENSMUST00000119896 PdgfdQ925I7 370 aa12.2□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Stox1B2RQL2 990 aa12.19□□□□□ -0.46
Ssr3-202ENSMUST00000119896 CastP51125 788 aa12.19□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Bcl2l13P59017 434 aa12.19□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Usp48Q3V0C5 1052 aa12.19□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Ggnbp2Q5SV77 696 aa12.19□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Pde4bB1AWC9 736 aa12.18□□□□□ -0.46
Ssr3-202ENSMUST00000119896 CltaO08585 235 aa12.18□□□□□ -0.46
Ssr3-202ENSMUST00000119896 WasP70315 520 aa12.18□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Dbndd1Q9CZ00 160 aa12.18□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Kif13bA0A286YCV9 1847 aa12.17□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Lama4P97927 1816 aa12.17□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Slc4a9E9PUP3 929 aa12.17□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Fbxo33Q8VE08 562 aa12.17□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Zfp831A2ADM8 1628 aa12.17□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Col1a2Q01149 1372 aa12.17□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Nkx1-1G3UXB3 402 aa12.16□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Dctn1O08788 1281 aa12.16□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Atp2b4Q6Q477 1205 aa12.16□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Ttc5Q99LG4 440 aa12.16□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Mapk8ip1Q9WVI9 707 aa12.16□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Duox1A2AQ92 1551 aa12.15□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Npy5rO70342 466 aa12.15□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Apaf1O88879 1249 aa12.15□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Eif4a1P60843 406 aaKnown RBP12.15□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Dok7Q18PE0 504 aa12.15□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Zc3h12cQ5DTV4 884 aa12.15□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Adam1aQ60813 791 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms