RNA–Protein interactions for RNA: ENSMUST00000109721.2

Ccm2-202, Transcript of Cerebral cavernous malformations protein 2 homolog, mousemouse

TSL 5 BASIC

Gene Ccm2, Length 1,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccm2-202ENSMUST00000109721 Ppp1r3fQ9JIG4 799 aa13.79□□□□□ -0.2
Ccm2-202ENSMUST00000109721 Tjp1P39447 1745 aaKnown RBP13.79□□□□□ -0.2
Ccm2-202ENSMUST00000109721 Shank3Q4ACU6 1730 aa13.79□□□□□ -0.2
Ccm2-202ENSMUST00000109721 Nsd3Q6P2L6 1439 aa13.78□□□□□ -0.2
Ccm2-202ENSMUST00000109721 Cntnap1O54991 1385 aa13.78□□□□□ -0.2
Ccm2-202ENSMUST00000109721 Elp1Q7TT37 1333 aaKnown RBP13.78□□□□□ -0.2
Ccm2-202ENSMUST00000109721 Eif3bQ8JZQ9 803 aaKnown RBP13.78□□□□□ -0.2
Ccm2-202ENSMUST00000109721 Chmp7Q8R1T1 451 aa13.78□□□□□ -0.2
Ccm2-202ENSMUST00000109721 Speer4bQ9D9F7 267 aa13.78□□□□□ -0.2
Ccm2-202ENSMUST00000109721 Ripk4Q9ERK0 786 aa13.78□□□□□ -0.2
Ccm2-202ENSMUST00000109721 Tiam2Q6ZPF3 1715 aa13.77□□□□□ -0.2
Ccm2-202ENSMUST00000109721 Ankrd44B2RXR6 993 aa13.77□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Pdia4P08003 638 aaKnown RBP13.77□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Nkx2-3P97334 362 aa13.77□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Ssfa2Q922B9 1252 aa13.77□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Foxp4Q9DBY0 795 aaKnown RBP13.77□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Msh6P54276 1358 aaKnown RBP13.77□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Gm21680A0A0G2JGR8 267 aa13.76□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Pibf1E9Q6K3 756 aa13.76□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Cavin2Q63918 418 aaKnown RBP13.76□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Emilin2Q8K482 1074 aa13.76□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Bloc1s4Q8VED2 215 aa13.76□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Tfip11Q9ERA6 838 aaKnown RBP13.76□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Mst1rQ62190 1378 aa13.76□□□□□ -0.21
Ccm2-202ENSMUST00000109721 1700019A02RikA0A087WPV9 146 aa13.75□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Sema6bO54951 886 aa13.75□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Asic4Q7TNS7 539 aa13.75□□□□□ -0.21
Ccm2-202ENSMUST00000109721 4931400O07RikQ9D4M5 137 aa13.75□□□□□ -0.21
Ccm2-202ENSMUST00000109721 CarsQ9ER72 831 aaKnown RBP13.75□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Nek4Q9Z1J2 792 aa13.75□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Ccdc129Q14B48 1034 aa13.75□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Q3UPC7 1272 aa13.75□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Eif4g2Q62448 906 aaKnown RBP13.75□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Nyap1Q6PFX7 833 aa13.75□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Plekhm2Q80TQ5 1018 aa13.75□□□□□ -0.21
Ccm2-202ENSMUST00000109721 EngaseQ8BX80 734 aa13.75□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Ltbp1Q8CG19 1712 aa13.74□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Btbd11Q6GQW0 1109 aa13.74□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Larp1Q6ZQ58 1072 aaKnown RBP13.74□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Cypt1Q8CH20 168 aa13.74□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Psrc1Q9D0P7 329 aa13.74□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Rnf123Q5XPI3 1314 aa13.73□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Gm21663A0A0G2JE01 267 aa13.73□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Gm45140A0A0N4SUM8 220 aa13.73□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Kcnh4A2A5F7 1018 aa13.73□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Gm7361D3Z6R1 267 aa13.73□□□□□ -0.21
Ccm2-202ENSMUST00000109721 5031410I06RikE9Q4E0 267 aa13.73□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Gm1979E9QAN3 267 aa13.73□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Gm5862K7N5V5 267 aa13.73□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Gm10220K7N660 267 aa13.73□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Ppip5k2Q6ZQB6 1129 aa13.73□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Kdm4aQ8BW72 1064 aa13.73□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Pm20d1Q8C165 503 aa13.73□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Col1a2Q01149 1372 aa13.73□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Ccdc173A0JLY1 547 aa13.72□□□□□ -0.21
Ccm2-202ENSMUST00000109721 NcapgE9PWG6 1004 aa13.72□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Rasa1E9PYG6 1038 aa13.72□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Trim27Q62158 513 aa13.72□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Slc5a1Q8C3K6 665 aa13.72□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Aldh1l2Q8K009 923 aa13.72□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Ginm1Q91WR6 327 aa13.72□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Erbb4Q61527 1308 aa13.72□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Atf5O70191 283 aa13.71□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Kif3aP28741 701 aa13.71□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Eif4a1P60843 406 aaKnown RBP13.71□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Q3TQI7 289 aaKnown RBP13.71□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Chpf2Q3UU43 768 aa13.71□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Ccdc155Q80VJ8 648 aa13.71□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Mrps27Q8BK72 415 aaKnown RBP13.71□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Mknk2Q8CDB0 459 aa13.71□□□□□ -0.21
Ccm2-202ENSMUST00000109721 MypopQ8R4U1 393 aa13.71□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Znf330Q922H9 316 aa13.71□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Rbm10Q99KG3 930 aaKnown RBP13.71□□□□□ -0.21
Ccm2-202ENSMUST00000109721 Chl1P70232 1209 aa13.71□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Sik1Q60670 779 aa13.71□□□□□ -0.22
Ccm2-202ENSMUST00000109721 GorabQ8BRM2 368 aa13.71□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Cyp2d12Q8BVD2 504 aa13.71□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Abca3Q8R420 1704 aa13.7□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Hoxa7P02830 229 aa13.7□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Nectin2P32507 530 aa13.7□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Sf3b2Q3UJB0 878 aaKnown RBP13.7□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Tmco5bQ80X59 307 aa13.7□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Kif4P33174 1231 aa13.69□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Rangap1P46061 589 aaKnown RBP13.69□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Nucb1Q02819 459 aaKnown RBP13.69□□□□□ -0.22
Ccm2-202ENSMUST00000109721 MarsQ68FL6 902 aaKnown RBP13.69□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Crb1Q8VHS2 1405 aa13.68□□□□□ -0.22
Ccm2-202ENSMUST00000109721 InhbeO08717 350 aa13.68□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Tnnt2P50752 301 aa13.68□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Ankrd23Q812A3 306 aa13.68□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Eno4Q8C042 619 aa13.68□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Rps6ka5Q8C050 863 aa13.68□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Gripap1Q8VD04 806 aa13.68□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Wdr78E9PYY5 807 aa13.67□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Tnnt1O88346 262 aa13.67□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Atp6v1dP57746 247 aa13.67□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Vps33bP59016 617 aa13.67□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Tbc1d31Q6NXY1 996 aa13.67□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Ppp6r3Q922D4 844 aa13.67□□□□□ -0.22
Ccm2-202ENSMUST00000109721 Rcan3Q9JKK0 239 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms