RNA–Protein interactions for RNA: ENSMUST00000096127.10

Ccdc50-202, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 1,096 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-202ENSMUST00000096127 Ubn2Q80WC1 1314 aa31.17■■■□□ 2.58
Ccdc50-202ENSMUST00000096127 Col4a1P02463 1669 aa31.16■■■□□ 2.58
Ccdc50-202ENSMUST00000096127 Tlr8P58682 1032 aa31.16■■■□□ 2.58
Ccdc50-202ENSMUST00000096127 Srp68Q8BMA6 625 aaKnown RBP31.16■■■□□ 2.58
Ccdc50-202ENSMUST00000096127 Trim52Q8CDV4 233 aa31.16■■■□□ 2.58
Ccdc50-202ENSMUST00000096127 Zswim8Q3UHH1 1832 aaKnown RBP31.15■■■□□ 2.58
Ccdc50-202ENSMUST00000096127 Rbm25B2RY56 838 aaKnown RBP31.15■■■□□ 2.58
Ccdc50-202ENSMUST00000096127 Plekhh1Q80TI1 1356 aa31.15■■■□□ 2.58
Ccdc50-202ENSMUST00000096127 NudcO35685 332 aaKnown RBP31.14■■■□□ 2.58
Ccdc50-202ENSMUST00000096127 ScaperF8VQ70 1398 aaKnown RBP31.13■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Lrp5Q91VN0 1614 aa31.13■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Ddx60E9PZQ1 1711 aa31.12■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 1810065E05RikQ5NC41 235 aa31.12■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Esco1Q69Z69 843 aa31.12■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Hirip3Q8BLH7 601 aa31.12■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Rad21Q61550 635 aaKnown RBP31.1■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Strn4P58404 760 aa31.09■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Wdhd1P59328 1117 aa31.09■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Ccdc30Q8BVF4 654 aa31.09■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Egfem1Q8C088 590 aa31.09■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Supt5hO55201 1082 aaKnown RBP31.08■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Magea6O89010 325 aa31.08■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Snai1Q02085 264 aa31.08■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Gnl3lQ6PGG6 577 aaKnown RBP31.08■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Magea3Q6T340 320 aa31.08■■■□□ 2.57
Ccdc50-202ENSMUST00000096127 Slf2Q6P9P0 1278 aa31.07■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 SowahdQ8BY98 327 aa31.07■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Ppm1fQ8CGA0 452 aa31.07■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Lama4P97927 1816 aa31.06■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Cnksr1A2A9K7 700 aa31.06■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Kcna3P16390 528 aa31.06■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Rad23bP54728 416 aa31.06■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Mrps5Q99N87 432 aaKnown RBP31.06■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 BcorQ8CGN4 1759 aa31.06■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Cfap70D3YVL2 1141 aa31.03■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Ksr2Q3UVC0 959 aa31.03■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Nlrp3Q8R4B8 1033 aa31.03■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Usp21Q9QZL6 566 aa31.03■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Togaram1Q6A070 1776 aaKnown RBP31.02■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Prdm11A2AGX3 565 aa31.02■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Ankle2Q6P1H6 964 aa31.02■■■□□ 2.56
Ccdc50-202ENSMUST00000096127 Tgfb2P27090 414 aa31.01■■■□□ 2.55
Ccdc50-202ENSMUST00000096127 Tktl2Q9D4D4 627 aa31.01■■■□□ 2.55
Ccdc50-202ENSMUST00000096127 Kank1E9Q238 1360 aa31.01■■■□□ 2.55
Ccdc50-202ENSMUST00000096127 Ambra1A2AH22 1300 aa30.99■■■□□ 2.55
Ccdc50-202ENSMUST00000096127 Ttll7A4Q9F0 912 aa30.98■■■□□ 2.55
Ccdc50-202ENSMUST00000096127 Igfbp6P47880 238 aa30.98■■■□□ 2.55
Ccdc50-202ENSMUST00000096127 Zfp444Q3TDV8 331 aaKnown RBP30.98■■■□□ 2.55
Ccdc50-202ENSMUST00000096127 NgdnQ9DB96 315 aaKnown RBP30.98■■■□□ 2.55
Ccdc50-202ENSMUST00000096127 Ssc5dQ8BV57 1371 aa30.97■■■□□ 2.55
Ccdc50-202ENSMUST00000096127 Vamp4O70480 141 aa30.97■■■□□ 2.55
Ccdc50-202ENSMUST00000096127 Sipa1l3G3X9J0 1776 aa30.97■■■□□ 2.55
Ccdc50-202ENSMUST00000096127 Ifit1bl2Q3U687 466 aa30.95■■■□□ 2.55
Ccdc50-202ENSMUST00000096127 CoilQ5SU73 570 aa30.95■■■□□ 2.55
Ccdc50-202ENSMUST00000096127 StrcQ8VIM6 1809 aa30.94■■■□□ 2.54
Ccdc50-202ENSMUST00000096127 Ccar1Q8CH18 1146 aaKnown RBP30.93■■■□□ 2.54
Ccdc50-202ENSMUST00000096127 Fkbp1aP26883 108 aaKnown RBP30.92■■■□□ 2.54
Ccdc50-202ENSMUST00000096127 Arid3aQ62431 601 aa30.92■■■□□ 2.54
Ccdc50-202ENSMUST00000096127 Gas2l2Q5SSG4 860 aa30.91■■■□□ 2.54
Ccdc50-202ENSMUST00000096127 Npy5rO70342 466 aa30.9■■■□□ 2.54
Ccdc50-202ENSMUST00000096127 Zbtb40Q6PCS8 1258 aa30.9■■■□□ 2.54
Ccdc50-202ENSMUST00000096127 Trim34aQ99PP6 485 aa30.9■■■□□ 2.54
Ccdc50-202ENSMUST00000096127 Chl1P70232 1209 aa30.89■■■□□ 2.54
Ccdc50-202ENSMUST00000096127 Rtkn2Q14B46 604 aa30.89■■■□□ 2.54
Ccdc50-202ENSMUST00000096127 KarsQ99MN1 595 aaKnown RBP30.89■■■□□ 2.54
Ccdc50-202ENSMUST00000096127 Cyp2c67Q569X9 491 aa30.88■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Irf9Q61179 399 aa30.88■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Gimap8Q75N62 688 aa30.88■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Camkk2Q8C078 588 aa30.88■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Tango6Q8C3S2 1079 aa30.88■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Duox1A2AQ92 1551 aa30.88■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Slurp2P0DP59 97 aa30.87■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Sgip1Q8VD37 806 aa30.87■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Flt4P35917 1363 aa30.87■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Stox1B2RQL2 990 aa30.86■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Zc3h12cQ5DTV4 884 aa30.86■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Taf1dQ9D4V4 322 aa30.86■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Echdc1Q9D9V3 322 aa30.86■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Mapk8ip1Q9WVI9 707 aa30.86■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Ccdc171E9Q1U1 1324 aa30.85■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Gm6268A2A3U9 297 aa30.85■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Cyp2c23E9Q5K4 494 aa30.84■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Ofd1Q80Z25 1017 aa30.84■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Sv2bQ8BG39 683 aa30.84■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 IarsQ8BU30 1262 aa30.84■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Fam83gQ5SWY7 812 aa30.83■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Adam1aQ60813 791 aa30.83■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Kcnn1Q9EQR3 537 aa30.83■■■□□ 2.53
Ccdc50-202ENSMUST00000096127 Pde4bB1AWC9 736 aa30.82■■■□□ 2.52
Ccdc50-202ENSMUST00000096127 CltaO08585 235 aa30.82■■■□□ 2.52
Ccdc50-202ENSMUST00000096127 Cavin2Q63918 418 aaKnown RBP30.82■■■□□ 2.52
Ccdc50-202ENSMUST00000096127 Lmnb1P14733 588 aaKnown RBP30.81■■■□□ 2.52
Ccdc50-202ENSMUST00000096127 Ccdc60Q8C4J0 545 aa30.81■■■□□ 2.52
Ccdc50-202ENSMUST00000096127 Dctn1O08788 1281 aa30.8■■■□□ 2.52
Ccdc50-202ENSMUST00000096127 Rnf180Q3U827 592 aa30.8■■■□□ 2.52
Ccdc50-202ENSMUST00000096127 AbraQ8BUZ1 375 aa30.8■■■□□ 2.52
Ccdc50-202ENSMUST00000096127 Rnaseh2aQ9CWY8 301 aa30.8■■■□□ 2.52
Ccdc50-202ENSMUST00000096127 Hspa2P17156 633 aa30.79■■■□□ 2.52
Ccdc50-202ENSMUST00000096127 Cyp2d11P24457 504 aa30.79■■■□□ 2.52
Ccdc50-202ENSMUST00000096127 Ankib1Q6ZPS6 1085 aa30.79■■■□□ 2.52
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms