RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Ddb1Q3U1J4 1140 aaKnown RBP12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Liat1Q810M6 228 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 AnlnQ8K298 1121 aaKnown RBP12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Tmc1Q8R4P5 757 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 NgdnQ9DB96 315 aaKnown RBP12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Simc1E9Q6E9 1354 aa12.57□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Phactr2B1AVP0 632 aa12.57□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Sptbn5F6UCX4 1208 aa12.57□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Ppip5k2Q6ZQB6 1129 aa12.57□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Dmrt2Q8BG36 561 aa12.56□□□□□ -0.4
Ldb3-205ENSMUST00000090040 R3hcc1Q8BSI6 488 aa12.56□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Rlbp1Q9Z275 317 aa12.56□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Cdhr2E9Q7P9 1308 aa12.56□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Ints3Q7TPD0 1041 aaKnown RBP12.56□□□□□ -0.4
Ldb3-205ENSMUST00000090040 RgmbQ7TQ33 436 aa12.56□□□□□ -0.4
Ldb3-205ENSMUST00000090040 FanclQ9CR14 375 aa12.56□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Lmbr1lQ9D1E5 489 aa12.56□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Lmod3E9QA62 571 aa12.56□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Psma5Q9Z2U1 241 aaKnown RBP12.56□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Myom1Q62234 1667 aaKnown RBP12.56□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Slc26a8Q8R0C3 999 aa12.56□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Tm6sf1P58749 370 aa12.55□□□□□ -0.4
Ldb3-205ENSMUST00000090040 MarsQ68FL6 902 aaKnown RBP12.55□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Bicdl1A0JNT9 577 aa12.55□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Noc3lQ8VI84 807 aaKnown RBP12.55□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Nip7Q9CXK8 180 aaKnown RBP12.55□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Mcmdc2E9Q956 681 aa12.55□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Bicc1Q99MQ1 977 aaKnown RBP12.55□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Ppp1r3fQ9JIG4 799 aa12.55□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Prkab2Q6PAM0 271 aa12.55□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Tmem119Q8R138 280 aa12.55□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Ccdc47Q9D024 483 aaKnown RBP12.55□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Bag3Q9JLV1 577 aaKnown RBP12.55□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Bcar3Q9QZK2 820 aa12.55□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Nol8Q3UHX0 1147 aaKnown RBP12.54□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Tbc1d9Q3UYK3 1264 aa12.54□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Brf1Q8CFK2 676 aa12.53□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Top1mtQ8R4U6 593 aa12.53□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Ier5O89113 308 aa12.53□□□□□ -0.4
Ldb3-205ENSMUST00000090040 4933402E13RikQ9D4D2 429 aa12.53□□□□□ -0.4
Ldb3-205ENSMUST00000090040 NktrP30415 1453 aa12.53□□□□□ -0.4
Ldb3-205ENSMUST00000090040 CoilQ5SU73 570 aa12.53□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Dnai2A2AC93 623 aa12.53□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Pde4bB1AWC9 736 aa12.53□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Tbc1d32Q3URV1 1296 aa12.53□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Mctp2Q5RJH2 878 aa12.53□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Clstn1Q9EPL2 979 aa12.53□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Col1a2Q01149 1372 aa12.53□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Slf2Q6P9P0 1278 aa12.52□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Ppp1r37Q8BKR5 712 aa12.52□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Rrs1Q9CYH6 365 aaKnown RBP12.52□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Pik3c2bE9QAN8 1632 aa12.52□□□□□ -0.41
Ldb3-205ENSMUST00000090040 AU015836B2RUM3 263 aa12.52□□□□□ -0.41
Ldb3-205ENSMUST00000090040 CrcpO35427 148 aa12.52□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Prl7d1P04769 244 aa12.52□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Strn4P58404 760 aa12.52□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Disp3A3KFU9 1347 aa12.52□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Kif1aP33173 1695 aa12.51□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Nrxn3Q6P9K9 1571 aa12.51□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Spryd3E9Q9B3 442 aa12.51□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Sik1Q60670 779 aa12.51□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Jakmip1Q8BVL9 626 aa12.51□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Sf3a1Q8K4Z5 791 aaKnown RBP12.51□□□□□ -0.41
Ldb3-205ENSMUST00000090040 CenppQ9CZ92 286 aa12.51□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Rimbp3Q3V0F0 1606 aa12.51□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Mmp8O70138 465 aa12.51□□□□□ -0.41
Ldb3-205ENSMUST00000090040 HellsQ60848 821 aa12.51□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Riok1Q922Q2 567 aa12.51□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Fam213aQ9CYH2 218 aa12.5□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Tfip11Q9ERA6 838 aaKnown RBP12.5□□□□□ -0.41
Ldb3-205ENSMUST00000090040 AceP09470 1312 aa12.5□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Kdm3aQ6PCM1 1323 aa12.5□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Sipa1l1Q8C0T5 1782 aa12.5□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Erc1Q99MI1 1120 aa12.5□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Erbb4Q61527 1308 aa12.5□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Rbm5Q91YE7 815 aaKnown RBP12.49□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Smc3Q9CW03 1217 aaKnown RBP12.49□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Nsfl1cQ9CZ44 370 aaKnown RBP12.49□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Gm12185Q5NCB2 835 aa12.49□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Q9D9S1 216 aa12.49□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Pard3Q99NH2 1333 aa12.49□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Ifit1bl2Q3U687 466 aa12.49□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Slc39a6Q8C145 765 aa12.49□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Sugp2Q8CH09 1067 aa12.49□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Ppp4r3aQ6P2K6 820 aa12.49□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Ssfa2Q922B9 1252 aa12.49□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Tubgcp6G5E8P0 1769 aa12.48□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Smarcc1P97496 1104 aa12.48□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Ppp1r9bQ6R891 817 aaKnown RBP12.48□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Tubb6Q922F4 447 aa12.48□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Glipr1l2Q9CQ35 332 aa12.48□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Tnrc6bQ8BKI2 1810 aaKnown RBP12.48□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Nkx1-2P42580 305 aa12.48□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Fbln2P37889 1221 aa12.48□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Irx3P81067 507 aa12.48□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Cplx2P84086 134 aa12.48□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Iqsec3Q3TES0 1195 aa12.48□□□□□ -0.41
Ldb3-205ENSMUST00000090040 GptQ8QZR5 496 aa12.48□□□□□ -0.41
Ldb3-205ENSMUST00000090040 CgnP59242 1191 aa12.48□□□□□ -0.41
Ldb3-205ENSMUST00000090040 Kiaa0753Q6A000 959 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms