RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Magea1O89006 320 aa31.66■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Magea5O89009 320 aa31.66■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Prom2Q3UUY6 835 aa31.66■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Magea2Q9R2A2 320 aa31.66■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Trip6Q9Z1Y4 480 aa31.66■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Ccar1Q8CH18 1146 aaKnown RBP31.65■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Col4a1P02463 1669 aa31.64■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Mtfr1lQ9CWE0 289 aa31.63■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 Kcnq2Q9Z351 759 aa31.63■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 Strn4P58404 760 aa31.62■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 Esco1Q69Z69 843 aa31.62■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 Col11a2Q64739 1736 aa31.61■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 Rbm26Q6NZN0 1012 aaKnown RBP31.61■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 Srp68Q8BMA6 625 aaKnown RBP31.61■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 CpzQ8R4V4 654 aa31.61■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 Tlr8P58682 1032 aa31.6■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 Gnl3lQ6PGG6 577 aaKnown RBP31.6■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 Gm6268A2A3U9 297 aa31.6■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 Kank1E9Q238 1360 aa31.59■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 Trim26Q99PN3 545 aa31.58■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 Ubn2Q80WC1 1314 aa31.57■■■□□ 2.65
Cpsf4-201ENSMUST00000070487 Ankle2Q6P1H6 964 aa31.57■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 Slf2Q6P9P0 1278 aa31.57■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 BcorQ8CGN4 1759 aa31.57■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 Plch1Q4KWH5 1682 aa31.56■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 Igfbp6P47880 238 aa31.56■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 Nlrp3Q8R4B8 1033 aa31.56■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 Ttll7A4Q9F0 912 aa31.55■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 Chl1P70232 1209 aa31.55■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 Snai1Q02085 264 aa31.55■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 KarsQ99MN1 595 aaKnown RBP31.55■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 Ddx60E9PZQ1 1711 aa31.54■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 CoilQ5SU73 570 aa31.54■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 1810065E05RikQ5NC41 235 aa31.53■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 Ccdc171E9Q1U1 1324 aa31.53■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 Ccdc60Q8C4J0 545 aa31.53■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 SowahdQ8BY98 327 aa31.52■■■□□ 2.64
Cpsf4-201ENSMUST00000070487 Nop58Q6DFW4 536 aaKnown RBP31.51■■■□□ 2.63
Cpsf4-201ENSMUST00000070487 Sv2bQ8BG39 683 aa31.51■■■□□ 2.63
Cpsf4-201ENSMUST00000070487 Wdhd1P59328 1117 aa31.5■■■□□ 2.63
Cpsf4-201ENSMUST00000070487 Polr3glQ8R0C0 218 aa31.49■■■□□ 2.63
Cpsf4-201ENSMUST00000070487 Ubxn2bQ0KL01 331 aa31.48■■■□□ 2.63
Cpsf4-201ENSMUST00000070487 Znrd1-asQ8R0E5 213 aa31.48■■■□□ 2.63
Cpsf4-201ENSMUST00000070487 NgdnQ9DB96 315 aaKnown RBP31.48■■■□□ 2.63
Cpsf4-201ENSMUST00000070487 Irf9Q61179 399 aa31.47■■■□□ 2.63
Cpsf4-201ENSMUST00000070487 Echdc1Q9D9V3 322 aa31.47■■■□□ 2.63
Cpsf4-201ENSMUST00000070487 Ifit1bl2Q3U687 466 aa31.46■■■□□ 2.63
Cpsf4-201ENSMUST00000070487 Fam83gQ5SWY7 812 aa31.46■■■□□ 2.63
Cpsf4-201ENSMUST00000070487 Tktl2Q9D4D4 627 aa31.46■■■□□ 2.63
Cpsf4-201ENSMUST00000070487 Lama4P97927 1816 aa31.46■■■□□ 2.63
Cpsf4-201ENSMUST00000070487 G3bp1P97855 465 aaKnown RBP31.45■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Cavin2Q63918 418 aaKnown RBP31.45■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Zbtb40Q6PCS8 1258 aa31.45■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Zswim8Q3UHH1 1832 aaKnown RBP31.44■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Plekhm2Q80TQ5 1018 aa31.44■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Ppm1fQ8CGA0 452 aa31.44■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Pcgf6Q99NA9 353 aa31.44■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 ScaperF8VQ70 1398 aaKnown RBP31.44■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Ssc5dQ8BV57 1371 aa31.43■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Aplp1Q03157 653 aa31.42■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Prdm11A2AGX3 565 aa31.42■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Fkbp1aP26883 108 aaKnown RBP31.41■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Trim34aQ99PP6 485 aa31.41■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Flt4P35917 1363 aa31.4■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Cyp2d11P24457 504 aa31.4■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Hirip3Q8BLH7 601 aa31.39■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Lrp5Q91VN0 1614 aa31.39■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Sipa1l3G3X9J0 1776 aa31.39■■■□□ 2.62
Cpsf4-201ENSMUST00000070487 Magea6O89010 325 aa31.38■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Hspa2P17156 633 aa31.38■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Adam1aQ60813 791 aa31.38■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Magea3Q6T340 320 aa31.38■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Bicc1Q99MQ1 977 aaKnown RBP31.38■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Mapk8ip1Q9WVI9 707 aa31.38■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Cfap70D3YVL2 1141 aa31.37■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Rangap1P46061 589 aaKnown RBP31.37■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Zc3h12cQ5DTV4 884 aa31.37■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Gimap8Q75N62 688 aa31.37■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Tmco5bQ80X59 307 aa31.37■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Arid3aQ62431 601 aa31.36■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Npy5rO70342 466 aa31.35■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Rad23bP54728 416 aa31.35■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Ankib1Q6ZPS6 1085 aa31.35■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Togaram1Q6A070 1776 aaKnown RBP31.35■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Stox1B2RQL2 990 aa31.34■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Cyp2c23E9Q5K4 494 aa31.34■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Nectin2P32507 530 aa31.34■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Rtkn2Q14B46 604 aa31.34■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Map3k2Q61083 619 aa31.34■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Usp21Q9QZL6 566 aa31.34■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Pde4bB1AWC9 736 aa31.33■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Egfem1Q8C088 590 aa31.33■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Disp3A3KFU9 1347 aa31.33■■■□□ 2.61
Cpsf4-201ENSMUST00000070487 Dctn1O08788 1281 aa31.32■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 Slurp2P0DP59 97 aa31.32■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 Tgfb2P27090 414 aa31.32■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 MarsQ68FL6 902 aaKnown RBP31.32■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 Ambra1A2AH22 1300 aa31.32■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 CltaO08585 235 aa31.31■■■□□ 2.6
Cpsf4-201ENSMUST00000070487 AbraQ8BUZ1 375 aa31.31■■■□□ 2.6
Retrieved 100 of 22,080 RNA–protein pairs in 56.3 ms