RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 EappQ5BU09 281 aa11.1□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Utp18Q5SSI6 552 aaKnown RBP11.1□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Tsen34Q8BMZ5 316 aa11.1□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Phf20l1Q8CCJ9 1013 aa11.1□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Tnrc6bQ8BKI2 1810 aaKnown RBP11.1□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Fchsd2Q3USJ8 740 aa11.1□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Add2Q9QYB8 725 aa11.1□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Dync1i1O88485 628 aa11.09□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 CebpzP53569 1052 aaKnown RBP11.09□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Ccne1Q61457 408 aa11.09□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Unc5clQ6R653 518 aa11.09□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Tbc1d8Q9Z1A9 1134 aa11.09□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Pnpla7A2AJ88 1352 aa11.09□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Q8BT18 775 aa11.09□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Mmel1Q9JLI3 765 aa11.09□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 N4bp2F8VQG7 1678 aaKnown RBP11.09□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Brpf1B2RRD7 1212 aa11.08□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Evi5lH3BKQ3 813 aa11.08□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Prkar2bP31324 416 aa11.08□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Erc2Q6PH08 957 aa11.08□□□□□ -0.63
Ccdc171-201ENSMUST00000053414 Nup153E9Q3G8 1462 aaKnown RBP11.08□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Pcdhgc5Q91XW9 944 aa11.08□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 CemipQ8BI06 1361 aa11.08□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Pik3c2aQ61194 1686 aa11.08□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Cfap73J3QPZ5 306 aa11.08□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Sp8Q8BMJ8 486 aa11.08□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Sirt1Q923E4 737 aa11.08□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Triml2E9PW10 424 aa11.08□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Kif3aP28741 701 aa11.08□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Spata32Q8C5V0 334 aa11.08□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Plcd3Q8K2J0 785 aa11.07□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Col22a1E9Q7P1 1613 aa11.07□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Arid5bQ8BM75 1188 aaKnown RBP11.07□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Rtf1A2AQ19 715 aaKnown RBP11.07□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Tom1O88746 492 aa11.07□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Ube2oQ6ZPJ3 1288 aa11.07□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 4930548H24RikQ9D496 437 aa11.07□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Map3k19E9Q3S4 1311 aa11.07□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Eif4g2Q62448 906 aaKnown RBP11.07□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 PtprtQ99M80 1454 aa11.07□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Slx4ipQ9D7Y9 413 aa11.07□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Chmp4bQ9D8B3 224 aaKnown RBP11.07□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Lins1Q3U1D0 764 aa11.06□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Tpx2A2APB8 745 aaKnown RBP11.06□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Rab11fip3Q8CHD8 1047 aa11.06□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Mlh1Q9JK91 760 aa11.06□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 C3P01027 1663 aa11.06□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Mcm3P25206 812 aaKnown RBP11.06□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Nucb2P81117 420 aa11.06□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Q9D2X8 372 aa11.06□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Ercc6l2Q9JIM3 1537 aa11.06□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Zscan29E9Q5B4 869 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Ess2O70279 479 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Samm50Q8BGH2 469 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Slc52a2Q9D8F3 450 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 AW822073A0A0N4SUK1 652 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Mcm2P97310 904 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Snx13Q6PHS6 957 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Nol12Q8BG17 217 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Ric3Q8BPM6 367 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Cabp2Q9JLK4 216 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 FancaQ9JL70 1439 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Cgnl1Q6AW69 1298 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Vps33aQ9D2N9 598 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Prrc2bQ7TPM1 1486 aaKnown RBP11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 C5P06684 1680 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Rsph6aQ8CDR2 708 aa11.05□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Zc3h13E9Q784 1729 aaKnown RBP11.04□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Cyp2d11P24457 504 aa11.04□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Zpr1Q62384 459 aa11.04□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 CenpjQ569L8 1344 aa11.04□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Shq1Q7TMX5 569 aa11.04□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Anapc15P60007 132 aa11.04□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Usp16Q99LG0 825 aa11.04□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Fam184aE9PW83 1143 aa11.03□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Lrriq3Q14DL3 633 aa11.03□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Ccdc173A0JLY1 547 aa11.03□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Surf1P09925 306 aa11.03□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 SnrkQ8VDU5 748 aa11.03□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Zbtb22Q9Z0G7 638 aa11.03□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 AatfQ9JKX4 526 aaKnown RBP11.03□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Mrpl50Q8VDT9 159 aaKnown RBP11.03□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Mmp8O70138 465 aa11.02□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Ccdc162pQ0VG85 912 aa11.02□□□□□ -0.64
Ccdc171-201ENSMUST00000053414 Topaz1E5FYH1 1653 aa11.02□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 Ube2hP62257 183 aa11.02□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 Cyp46a1Q9WVK8 500 aa11.02□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 Ptpn23Q6PB44 1692 aa11.02□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 Lnx1O70263 728 aa11.02□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 Phactr2B1AVP0 632 aa11.01□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 Gnai1B2RSH2 354 aa11.01□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 Gnai3Q9DC51 354 aa11.01□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 Klra1P20937 262 aa11.01□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 PzpQ61838 1495 aa11.01□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 Snap23O09044 210 aa11.01□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 F2rP30558 430 aa11.01□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 Ccdc178Q8CDV0 866 aa11.01□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 Aox4Q3TYQ9 1336 aa11.01□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 Ppp1r15aP17564 657 aa11.01□□□□□ -0.65
Ccdc171-201ENSMUST00000053414 Kcnj4P52189 445 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms