RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Gigyf1Q99MR1 1044 aaKnown RBP11.26□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Igfbp6P47880 238 aa11.26□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Smarcc1P97496 1104 aa11.26□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Pim2Q62070 370 aa11.26□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Nip7Q9CXK8 180 aaKnown RBP11.26□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Irf9Q61179 399 aa11.25□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Ppp1r3fQ9JIG4 799 aa11.25□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Ttll7A4Q9F0 912 aa11.25□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Ankle2Q6P1H6 964 aa11.25□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Maco1Q7TQE6 664 aaKnown RBP11.25□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Zbtb1Q91VL9 713 aa11.25□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Casz1Q9CWL2 1761 aa11.24□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Gm13023A2A8N2 498 aa11.24□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Ank1Q02357 1862 aa11.24□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Nutm1Q8BHP2 1126 aa11.24□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Ubr3Q5U430 1889 aa11.24□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Apba2P98084 750 aa11.23□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Mbd3Q9Z2D8 285 aaKnown RBP11.23□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Rapgef4Q9EQZ6 1011 aa11.23□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Znf521Q6KAS7 1311 aa11.22□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Prr29B1ARI9 187 aa11.22□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 NeflP08551 543 aa11.22□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Map3k2Q61083 619 aa11.22□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Bicc1Q99MQ1 977 aaKnown RBP11.22□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Gnl3lQ6PGG6 577 aaKnown RBP11.21□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 MvpQ9EQK5 861 aa11.21□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Exoc6bA6H5Z3 810 aa11.21□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Ankrd44B2RXR6 993 aa11.21□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Lrrc43Q3V0L5 667 aa11.21□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Zbtb40Q6PCS8 1258 aa11.21□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Arap2Q8BZ05 1703 aa11.21□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Prr5lA2AVJ5 370 aa11.2□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Hspa2P17156 633 aa11.2□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Calr4Q3TQS0 420 aa11.2□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Kcna4Q61423 654 aa11.2□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Tspyl2Q7TQI8 677 aa11.2□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Phf23Q8BSN5 401 aa11.2□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Ppm1mQ8BU27 406 aa11.2□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 HellsQ60848 821 aa11.19□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Bend3Q6PAL0 825 aa11.19□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Mphosph10Q810V0 681 aaKnown RBP11.19□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Slfnl1Q8BHW9 410 aa11.19□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 MypnQ5DTJ9 1315 aa11.19□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Col11a2Q64739 1736 aa11.19□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Ankrd31A0A140LI88 1765 aa11.19□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Aldh1l2Q8K009 923 aa11.19□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Zfyve9A2A8R0 1397 aa11.18□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Plch1Q4KWH5 1682 aa11.18□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Ddx58Q6Q899 926 aa11.18□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Nlrp3Q8R4B8 1033 aa11.18□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Chmp4bQ9D8B3 224 aaKnown RBP11.18□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Ssc5dQ8BV57 1371 aa11.18□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 AampJ3QN89 436 aa11.18□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Zap70P43404 618 aa11.18□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 RtcbQ99LF4 505 aaKnown RBP11.18□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 MeiocA2AG06 965 aa11.17□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Fam198bQ3UPI1 517 aa11.17□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Esco1Q69Z69 843 aa11.17□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 HmcesQ8R1M0 353 aaKnown RBP11.17□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Dpf1Q9QX66 387 aa11.17□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Trip6Q9Z1Y4 480 aa11.17□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Cfdp1O88271 295 aaKnown RBP11.16□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Strn4P58404 760 aa11.16□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Fkbp5Q64378 456 aa11.16□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Slf2Q6P9P0 1278 aa11.16□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Kdm2bQ6P1G2 1309 aa11.16□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Myh1Q5SX40 1942 aa11.16□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Atp1b3P97370 278 aa11.16□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 AbraQ8BUZ1 375 aa11.16□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Nsfl1cQ9CZ44 370 aaKnown RBP11.16□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Eif3aP23116 1344 aaKnown RBP11.16□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Spata31d1bE9QA57 1361 aa11.16□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Mrc1Q61830 1456 aa11.16□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 AK157302I3ITR1 129 aa11.15□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 NppbP40753 121 aa11.15□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Ankib1Q6ZPS6 1085 aa11.15□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Isca1Q9D924 129 aa11.15□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Duxf3A0A0N4SV92 674 aa11.15□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Fgd1P52734 960 aa11.15□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Prkrip1Q9CWV6 186 aaKnown RBP11.15□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Ltb4r2Q9JJL9 360 aa11.15□□□□□ -0.62
Ccdc28a-201ENSMUST00000052648 Fkbp1aP26883 108 aaKnown RBP11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Snai1Q02085 264 aa11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Map3k13Q1HKZ5 959 aa11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Adam1aQ60813 791 aa11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Lmbr1lQ9D1E5 489 aa11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Stk36Q69ZM6 1316 aa11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Prkar2bP31324 416 aa11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Csrnp3P59055 597 aa11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Kcnh8P59111 1102 aa11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Ripor2Q80U16 1078 aa11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 SowahdQ8BY98 327 aa11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Amhr2Q8K592 568 aa11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 OscarQ8VBT3 265 aa11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Ehd4Q9EQP2 541 aa11.14□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Greb1lB9EJV3 1913 aa11.13□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Myd88P22366 296 aa11.13□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Grm8P47743 908 aa11.13□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Soga3Q6NZL0 945 aa11.13□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Cwc25Q9DBF7 416 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms