RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Ccdc43Q9CR29 222 aaKnown RBP19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Cdk13Q69ZA1 1511 aaKnown RBP19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Phlpp2Q8BXA7 1320 aa19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Eva1cP58659 440 aa19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Ppp1r42Q8R1Z4 357 aa19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Trim29Q8R2Q0 587 aa19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Peg3Q3URU2 1571 aa19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Cfap73J3QPZ5 306 aa19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Usp25P57080 1055 aa19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Gng11P61953 73 aa19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Ppp4r3bQ922R5 820 aa19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Vps53Q8CCB4 832 aa19.39■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Bcl11bQ99PV8 884 aa19.39■□□□□ 0.7
Col17a1-201ENSMUST00000026045 March6Q6ZQ89 909 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Ncbp3Q8BZR9 615 aaKnown RBP19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Gm21663A0A0G2JE01 267 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Gm7361D3Z6R1 267 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 5031410I06RikE9Q4E0 267 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Gm1979E9QAN3 267 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Gm5862K7N5V5 267 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Gm10220K7N660 267 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Pip4k2aO70172 405 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Ccdc178Q8CDV0 866 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Luc7lQ9CYI4 371 aaKnown RBP19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Sytl4Q9R0Q1 673 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Ccne1Q61457 408 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Fam177a1Q8BR63 207 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 MycbpQ9EQS3 103 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Adcy10Q8C0T9 1614 aa19.39■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Abl1P00520 1123 aa19.38■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Ube2hP62257 183 aa19.38■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Tax1bp1Q3UKC1 814 aaKnown RBP19.38■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Ddx49Q4FZF3 480 aaKnown RBP19.38■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Jade2Q6ZQF7 829 aa19.38■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Kdm4aQ8BW72 1064 aa19.38■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Gapvd1Q6PAR5 1458 aa19.38■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Cep63Q3UPP8 700 aa19.38■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Brf1Q8CFK2 676 aa19.37■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Mkrn1Q9QXP6 481 aa19.37■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Atp6v1aP50516 617 aaKnown RBP19.37■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Agtpbp1Q641K1 1218 aa19.37■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Kdm3bQ6ZPY7 1562 aa19.36■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Gm10563F6WIE4 79 aa19.36■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Tango6Q8C3S2 1079 aa19.36■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Ccdc12Q8R344 166 aaKnown RBP19.36■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Gm21680A0A0G2JGR8 267 aa19.36■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Pnpla2Q8BJ56 486 aa19.36■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Tbc1d9Q3UYK3 1264 aa19.36■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Idi2Q8BFZ6 227 aa19.36■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Odf2lQ9D478 642 aa19.36■□□□□ 0.69
Col17a1-201ENSMUST00000026045 NinlQ6ZQ12 1394 aa19.36■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Cfap45Q9D9U9 551 aa19.35■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Lmtk2Q3TYD6 1471 aa19.35■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Naip6Q9JIB6 1403 aa19.35■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Ddx19aQ61655 478 aaKnown RBP19.35■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Letm1Q9Z2I0 738 aa19.35■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Pof1bQ8K4L4 587 aa19.35■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Ccdc96Q9CR92 584 aa19.35■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Rhot2Q8JZN7 620 aa19.35■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Tubb4aQ9D6F9 444 aa19.35■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Znf653Q6YND2 615 aa19.34■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Ttc19Q8CC21 365 aa19.34■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Rbm28Q8CGC6 750 aaKnown RBP19.34■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Bcar3Q9QZK2 820 aa19.34■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Ankrd44B2RXR6 993 aa19.34■□□□□ 0.69
Col17a1-201ENSMUST00000026045 4930548H24RikQ9D496 437 aa19.34■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Rsrc1Q9DBU6 334 aa19.34■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Klhdc4Q921I2 584 aa19.34■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Atf7ipQ7TT18 1306 aa19.34■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Erc1Q99MI1 1120 aa19.34■□□□□ 0.69
Col17a1-201ENSMUST00000026045 Ccdc114Q3UX62 658 aa19.33■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Mctp2Q5RJH2 878 aa19.33■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Fam50bQ9WTJ8 334 aa19.33■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Stx1aO35526 288 aa19.33■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Snx13Q6PHS6 957 aa19.33■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Cpsf1Q9EPU4 1441 aaKnown RBP19.33■□□□□ 0.68
Col17a1-201ENSMUST00000026045 GphnQ8BUV3 769 aaKnown RBP19.33■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Dpf1Q9QX66 387 aa19.33■□□□□ 0.68
Col17a1-201ENSMUST00000026045 4921504E06RikQ8CET2 560 aa19.32■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Ccdc158Q8CDI6 1109 aa19.32■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Gm3409A0A0G2JE67 319 aa19.32■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Rai14Q9EP71 979 aaKnown RBP19.32■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Kif21aQ9QXL2 1672 aa19.32■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Igbp1bQ9QZ29 343 aa19.32■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Fnbp4Q6ZQ03 1031 aa19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Brd1E9PZ26 1189 aaKnown RBP19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Washc4Q3UMB9 1173 aa19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Anp32cQ64G17 123 aa19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Ddx54Q8K4L0 874 aaKnown RBP19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Luzp1Q8R4U7 1068 aaKnown RBP19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Wdr63B2RY71 923 aa19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Cct4P80315 539 aaKnown RBP19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 4930572O03RikQ8C5Y0 211 aa19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Slc26a8Q8R0C3 999 aa19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Smc1aQ9CU62 1233 aaKnown RBP19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Ptgs1P22437 602 aa19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Gigyf2Q6Y7W8 1291 aaKnown RBP19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Tmx1Q8VBT0 278 aa19.31■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Igsf3Q6ZQA6 1194 aa19.3■□□□□ 0.68
Col17a1-201ENSMUST00000026045 Ddx58Q6Q899 926 aa19.3■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms