RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Kcnn1Q9EQR3 537 aa12.6□□□□□ -0.39
Ciita-201ENSMUST00000023147 Nap1l5Q9JJF0 156 aa12.6□□□□□ -0.39
Ciita-201ENSMUST00000023147 Zscan20B2KFW1 1030 aa12.6□□□□□ -0.39
Ciita-201ENSMUST00000023147 Cwc27Q3TKY6 469 aa12.6□□□□□ -0.39
Ciita-201ENSMUST00000023147 Lamb3Q61087 1168 aa12.6□□□□□ -0.39
Ciita-201ENSMUST00000023147 Stk3Q9JI10 497 aa12.6□□□□□ -0.39
Ciita-201ENSMUST00000023147 DesP31001 469 aaKnown RBP12.6□□□□□ -0.39
Ciita-201ENSMUST00000023147 Tarbp1E9Q368 1579 aa12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 MycnP03966 462 aaKnown RBP12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 Cnnm1Q0GA42 951 aa12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 Krt84Q99M73 603 aa12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 Ankrd50F7BE84 1390 aa12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 Col17a1Q07563 1470 aa12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 Trim34bJ3QNR8 485 aa12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 Fez2Q6TYB5 348 aa12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 Trim34aQ99PP6 485 aa12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 Olr1Q9EQ09 363 aa12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 Mrvi1Q9WUX5 899 aaKnown RBP12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 Uggt2E9Q4X2 1504 aa12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 Kif1bQ60575 1816 aaKnown RBP12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 Slc12a5Q91V14 1138 aa12.59□□□□□ -0.39
Ciita-201ENSMUST00000023147 Igbp1bQ9QZ29 343 aa12.58□□□□□ -0.4
Ciita-201ENSMUST00000023147 AU019823E9PUQ3 292 aa12.58□□□□□ -0.4
Ciita-201ENSMUST00000023147 Adcy5P84309 1262 aa12.58□□□□□ -0.4
Ciita-201ENSMUST00000023147 Bloc1s4Q8VED2 215 aa12.58□□□□□ -0.4
Ciita-201ENSMUST00000023147 Gm7361D3Z6R1 267 aa12.58□□□□□ -0.4
Ciita-201ENSMUST00000023147 Cetn1P41209 172 aa12.58□□□□□ -0.4
Ciita-201ENSMUST00000023147 Sept11Q8C1B7 431 aaKnown RBP12.58□□□□□ -0.4
Ciita-201ENSMUST00000023147 Cdc45Q9Z1X9 566 aa12.58□□□□□ -0.4
Ciita-201ENSMUST00000023147 Mctp1E9PV86 951 aa12.58□□□□□ -0.4
Ciita-201ENSMUST00000023147 Hmgb2P30681 210 aaKnown RBP12.58□□□□□ -0.4
Ciita-201ENSMUST00000023147 Zkscan7E9PVW1 718 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 MpripP97434 1024 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Nucb1Q02819 459 aaKnown RBP12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Nol8Q3UHX0 1147 aaKnown RBP12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Hoxb7P09024 217 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Ccdc102aQ3TMW1 549 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Ell2Q3UKU1 639 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Gm156Q58A37 223 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Rnf187Q8BFX1 236 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Ttc21aQ8C0S4 1314 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Jakmip2D3YXK0 820 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Ccdc172Q810N9 267 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Ccdc94Q9D6J3 314 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Ccdc112A0AUP1 442 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Vps37dQ810I0 261 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Ccdc178Q8CDV0 866 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Cep170Q6A065 1588 aa12.57□□□□□ -0.4
Ciita-201ENSMUST00000023147 Usp19Q3UJD6 1360 aa12.56□□□□□ -0.4
Ciita-201ENSMUST00000023147 Pdia3P27773 505 aaKnown RBP12.56□□□□□ -0.4
Ciita-201ENSMUST00000023147 Gjb2Q00977 226 aa12.56□□□□□ -0.4
Ciita-201ENSMUST00000023147 Secisbp2lQ6A098 1086 aaKnown RBP12.56□□□□□ -0.4
Ciita-201ENSMUST00000023147 Talpid3E9PV87 1520 aa12.56□□□□□ -0.4
Ciita-201ENSMUST00000023147 Znf287Q9EQB9 759 aa12.56□□□□□ -0.4
Ciita-201ENSMUST00000023147 Sass6Q80UK7 654 aa12.56□□□□□ -0.4
Ciita-201ENSMUST00000023147 Mroh2aD3Z750 1679 aa12.56□□□□□ -0.4
Ciita-201ENSMUST00000023147 Hecw1Q8K4P8 1604 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Rnf17Q99MV7 1640 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Eif2ak4Q9QZ05 1648 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Map2k1P31938 393 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 EvcP57680 1005 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 TmpoQ61033 693 aaKnown RBP12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Wasf1Q8R5H6 559 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Smarca5Q91ZW3 1051 aaKnown RBP12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 IncenpQ9WU62 880 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Kdm5aQ3UXZ9 1690 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Cfap157Q0VFX2 523 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Spag5Q7TME2 1165 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Sept7O55131 436 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Golim4Q8BXA1 655 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Stx6Q9JKK1 255 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Plxnc1Q9QZC2 1574 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Mybbp1aQ7TPV4 1344 aaKnown RBP12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Plekhd1B2RPU2 505 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Nf2P46662 596 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Ccdc83Q9D4V3 305 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 MicalclQ9D5U9 680 aa12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Znf518aB2RRF6 1478 aaKnown RBP12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Iqgap1Q9JKF1 1657 aaKnown RBP12.55□□□□□ -0.4
Ciita-201ENSMUST00000023147 Cbx1P83917 185 aaKnown RBP12.54□□□□□ -0.4
Ciita-201ENSMUST00000023147 Cpa2Q504N0 417 aa12.54□□□□□ -0.4
Ciita-201ENSMUST00000023147 Fam13aQ8BGI4 693 aa12.54□□□□□ -0.4
Ciita-201ENSMUST00000023147 Ddx46Q569Z5 1032 aaKnown RBP12.54□□□□□ -0.4
Ciita-201ENSMUST00000023147 Slu7Q8BHJ9 585 aa12.54□□□□□ -0.4
Ciita-201ENSMUST00000023147 Ppp1r42Q8R1Z4 357 aa12.54□□□□□ -0.4
Ciita-201ENSMUST00000023147 Galntl5Q9D4M9 431 aa12.54□□□□□ -0.4
Ciita-201ENSMUST00000023147 ClasrpQ8CFC7 668 aa12.54□□□□□ -0.4
Ciita-201ENSMUST00000023147 Mapk8ip1Q9WVI9 707 aa12.54□□□□□ -0.4
Ciita-201ENSMUST00000023147 Tulp4Q9JIL5 1547 aa12.54□□□□□ -0.4
Ciita-201ENSMUST00000023147 Lrrc7Q80TE7 1490 aa12.54□□□□□ -0.4
Ciita-201ENSMUST00000023147 Lekr1B2RVN1 116 aa12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 AatkQ80YE4 1365 aa12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 Cnksr2Q80YA9 1032 aa12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 Hook3Q8BUK6 718 aa12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 Rnf216P58283 853 aa12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 Mex3cQ05A36 652 aaKnown RBP12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 Pdlim2Q8R1G6 349 aa12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 Grpel1Q99LP6 217 aa12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 Smc1aQ9CU62 1233 aaKnown RBP12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 Usp54Q8BL06 1588 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms