RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Dip2bQ3UH60 1574 aa13.77□□□□□ -0.21
Sdc1-201ENSMUST00000020911 PaskQ8CEE6 1383 aa13.77□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Snap23O09044 210 aa13.77□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Tbc1d9Q3UYK3 1264 aa13.77□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Dennd6aQ8BH65 605 aa13.77□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.76□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Q3UPC7 1272 aa13.76□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Cpa2Q504N0 417 aa13.76□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Nol12Q8BG17 217 aa13.76□□□□□ -0.21
Sdc1-201ENSMUST00000020911 GscQ02591 256 aa13.76□□□□□ -0.21
Sdc1-201ENSMUST00000020911 KnstrnQ9D9Z1 312 aaKnown RBP13.76□□□□□ -0.21
Sdc1-201ENSMUST00000020911 MvpQ9EQK5 861 aa13.76□□□□□ -0.21
Sdc1-201ENSMUST00000020911 PtpruB1AUH1 1446 aa13.75□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Trap1aP19473 224 aa13.75□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Ift57Q8BXG3 429 aa13.75□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Myo1cQ9WTI7 1063 aa13.75□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Ccdc171E9Q1U1 1324 aa13.75□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Ncapd2Q8K2Z4 1392 aa13.75□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Vamp4O70480 141 aa13.75□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Mmp14P53690 582 aa13.75□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Naa30Q8CES0 364 aa13.75□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Ess2O70279 479 aa13.75□□□□□ -0.21
Sdc1-201ENSMUST00000020911 EzrP26040 586 aaKnown RBP13.75□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Pik3r4Q8VD65 1358 aa13.74□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Pik3c2bE9QAN8 1632 aa13.74□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Pcdh10E9PXQ7 1057 aa13.74□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Ccne1Q61457 408 aa13.74□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Casc1Q6TDU8 730 aa13.74□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Mdc1Q5PSV9 1707 aa13.74□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Ap5z1Q3U829 807 aa13.74□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Cfdp1O88271 295 aaKnown RBP13.73□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Ranbp1P34022 203 aaKnown RBP13.73□□□□□ -0.21
Sdc1-201ENSMUST00000020911 TmpoQ61033 693 aaKnown RBP13.73□□□□□ -0.21
Sdc1-201ENSMUST00000020911 E2f4Q8R0K9 410 aa13.73□□□□□ -0.21
Sdc1-201ENSMUST00000020911 RdxP26043 583 aaKnown RBP13.73□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Nsd3Q6P2L6 1439 aa13.73□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Rtf1A2AQ19 715 aaKnown RBP13.73□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Nap1l1P28656 391 aaKnown RBP13.73□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Irf6P97431 467 aa13.73□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Zkscan4Q5SZT6 480 aa13.73□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Tmem132eQ6IEE6 982 aa13.73□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Spata32Q8C5V0 334 aa13.73□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Gemin5Q8BX17 1502 aaKnown RBP13.73□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Chd4Q6PDQ2 1915 aaKnown RBP13.72□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Zscan29E9Q5B4 869 aa13.72□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Klra1P20937 262 aa13.72□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Recql4Q75NR7 1216 aaKnown RBP13.72□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Slc35g1Q8BY79 368 aa13.72□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Ssr1Q9CY50 286 aaKnown RBP13.72□□□□□ -0.21
Sdc1-201ENSMUST00000020911 EcsitQ9QZH6 435 aa13.72□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Ric3Q8BPM6 367 aa13.72□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Mtx1P47802 317 aa13.71□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Anp32eP97822 260 aaKnown RBP13.71□□□□□ -0.21
Sdc1-201ENSMUST00000020911 GphnQ8BUV3 769 aaKnown RBP13.71□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Paf1Q8K2T8 535 aa13.71□□□□□ -0.21
Sdc1-201ENSMUST00000020911 Prim1P20664 417 aa13.71□□□□□ -0.21
Sdc1-201ENSMUST00000020911 1700010I14RikQ7TPG0 532 aa13.71□□□□□ -0.21
Sdc1-201ENSMUST00000020911 EngaseQ8BX80 734 aa13.71□□□□□ -0.21
Sdc1-201ENSMUST00000020911 RargP18911 458 aaKnown RBP13.71□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Mcm3P25206 812 aaKnown RBP13.71□□□□□ -0.22
Sdc1-201ENSMUST00000020911 SkilQ60665 675 aa13.71□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Aldh1l1Q8R0Y6 902 aa13.71□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Frmpd2A0A140LI67 1392 aa13.7□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Exoc6bA6H5Z3 810 aa13.7□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Aifm3Q3TY86 605 aa13.7□□□□□ -0.22
Sdc1-201ENSMUST00000020911 TfrcQ62351 763 aaKnown RBP13.7□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Nlgn1Q99K10 843 aa13.7□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Adamtsl3G3UXC7 1706 aa13.7□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Brd1E9PZ26 1189 aaKnown RBP13.7□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Uhrf1bp1B2KF50 1429 aa13.7□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Kansl3A2RSY1 903 aaKnown RBP13.69□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Ttll12Q3UDE2 639 aa13.69□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Oxsr1Q6P9R2 527 aa13.69□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Rfc1P35601 1131 aa13.69□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Trerf1Q8BXJ2 1205 aa13.69□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Bicd2Q921C5 820 aa13.69□□□□□ -0.22
Sdc1-201ENSMUST00000020911 FancaQ9JL70 1439 aa13.69□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Astn2Q80Z10 1352 aa13.69□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Usp32F8VPZ3 1604 aa13.69□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Brpf3B2KF05 1204 aaKnown RBP13.69□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Hoxb7P09024 217 aa13.69□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Eya1P97767 591 aa13.69□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Nrbp1Q99J45 535 aa13.69□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Triml2E9PW10 424 aa13.68□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Zcchc17Q9ESX4 241 aaKnown RBP13.68□□□□□ -0.22
Sdc1-201ENSMUST00000020911 4930407I10RikD3Z5T8 1512 aa13.68□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Smarce1O54941 411 aaKnown RBP13.68□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Samm50Q8BGH2 469 aa13.68□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Cgref1Q8R1U2 281 aa13.68□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Golga5Q9QYE6 729 aa13.68□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Chd2E9PZM4 1827 aaKnown RBP13.68□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Slit3Q9WVB4 1523 aa13.67□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Chaf1aQ9QWF0 911 aa13.67□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Rreb1Q3UH06 1700 aaKnown RBP13.67□□□□□ -0.22
Sdc1-201ENSMUST00000020911 ErmnQ5EBJ4 281 aa13.67□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Fam53cQ8BXQ8 393 aa13.67□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Cps1Q8C196 1500 aa13.67□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Ca8P28651 291 aa13.67□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Q32P12 615 aa13.67□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Ano6Q6P9J9 911 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms