RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Zap70P43404 618 aa19.91■□□□□ 0.78
Shh-201ENSMUST00000002708 Pnma3Q8JZW8 466 aa19.91■□□□□ 0.78
Shh-201ENSMUST00000002708 Cnksr1A2A9K7 700 aa19.91■□□□□ 0.78
Shh-201ENSMUST00000002708 Bcl2l13P59017 434 aa19.91■□□□□ 0.78
Shh-201ENSMUST00000002708 Ncoa4Q5U4H9 625 aa19.91■□□□□ 0.78
Shh-201ENSMUST00000002708 Gimap6Q8K349 305 aa19.91■□□□□ 0.78
Shh-201ENSMUST00000002708 Kdm6aO70546 1401 aa19.9■□□□□ 0.78
Shh-201ENSMUST00000002708 Tlr7P58681 1050 aa19.9■□□□□ 0.78
Shh-201ENSMUST00000002708 Gzf1Q4VBD9 706 aa19.9■□□□□ 0.78
Shh-201ENSMUST00000002708 Btbd11Q6GQW0 1109 aa19.9■□□□□ 0.78
Shh-201ENSMUST00000002708 Chd1lQ9CXF7 900 aa19.9■□□□□ 0.78
Shh-201ENSMUST00000002708 TimelessQ9R1X4 1197 aa19.9■□□□□ 0.78
Shh-201ENSMUST00000002708 Topaz1E5FYH1 1653 aa19.9■□□□□ 0.78
Shh-201ENSMUST00000002708 Ier5O89113 308 aa19.89■□□□□ 0.78
Shh-201ENSMUST00000002708 Filip1lQ6P6L0 1131 aa19.89■□□□□ 0.78
Shh-201ENSMUST00000002708 Map3k13Q1HKZ5 959 aa19.89■□□□□ 0.77
Shh-201ENSMUST00000002708 Slc4a10Q5DTL9 1118 aa19.89■□□□□ 0.77
Shh-201ENSMUST00000002708 Gripap1Q8VD04 806 aa19.89■□□□□ 0.77
Shh-201ENSMUST00000002708 Bcl9Q9D219 1425 aa19.89■□□□□ 0.77
Shh-201ENSMUST00000002708 Ush1cQ9ES64 910 aa19.89■□□□□ 0.77
Shh-201ENSMUST00000002708 Tpm2P58774 284 aa19.88■□□□□ 0.77
Shh-201ENSMUST00000002708 Fez1Q8K0X8 392 aa19.88■□□□□ 0.77
Shh-201ENSMUST00000002708 Kcnh5Q920E3 988 aa19.88■□□□□ 0.77
Shh-201ENSMUST00000002708 LlphQ9D945 130 aaKnown RBP19.88■□□□□ 0.77
Shh-201ENSMUST00000002708 Alpk3Q924C5 1678 aa19.87■□□□□ 0.77
Shh-201ENSMUST00000002708 Fmnl2A2APV2 1086 aa19.87■□□□□ 0.77
Shh-201ENSMUST00000002708 Cfdp1O88271 295 aaKnown RBP19.87■□□□□ 0.77
Shh-201ENSMUST00000002708 Slx4ipQ9D7Y9 413 aa19.87■□□□□ 0.77
Shh-201ENSMUST00000002708 Pmfbp1Q9WVQ0 1022 aa19.87■□□□□ 0.77
Shh-201ENSMUST00000002708 Kif4P33174 1231 aa19.86■□□□□ 0.77
Shh-201ENSMUST00000002708 Mphosph10Q810V0 681 aaKnown RBP19.86■□□□□ 0.77
Shh-201ENSMUST00000002708 Rimbp3Q3V0F0 1606 aa19.86■□□□□ 0.77
Shh-201ENSMUST00000002708 Wdr17E9Q271 1322 aa19.86■□□□□ 0.77
Shh-201ENSMUST00000002708 Bend3Q6PAL0 825 aa19.86■□□□□ 0.77
Shh-201ENSMUST00000002708 Stk3Q9JI10 497 aa19.86■□□□□ 0.77
Shh-201ENSMUST00000002708 Ppp1r37Q8BKR5 712 aa19.85■□□□□ 0.77
Shh-201ENSMUST00000002708 Mlh1Q9JK91 760 aa19.85■□□□□ 0.77
Shh-201ENSMUST00000002708 Thsd7aQ69ZU6 1645 aa19.85■□□□□ 0.77
Shh-201ENSMUST00000002708 Nol8Q3UHX0 1147 aaKnown RBP19.85■□□□□ 0.77
Shh-201ENSMUST00000002708 Echdc1Q9D9V3 322 aa19.85■□□□□ 0.77
Shh-201ENSMUST00000002708 Col1a2Q01149 1372 aa19.85■□□□□ 0.77
Shh-201ENSMUST00000002708 Pdzrn3Q69ZS0 1063 aa19.84■□□□□ 0.77
Shh-201ENSMUST00000002708 F2rP30558 430 aa19.84■□□□□ 0.77
Shh-201ENSMUST00000002708 Scaf1Q5U4C3 1256 aaKnown RBP19.84■□□□□ 0.77
Shh-201ENSMUST00000002708 IbspQ61711 324 aa19.84■□□□□ 0.77
Shh-201ENSMUST00000002708 Aox2Q5SGK3 1345 aa19.84■□□□□ 0.77
Shh-201ENSMUST00000002708 Rnf123Q5XPI3 1314 aa19.84■□□□□ 0.77
Shh-201ENSMUST00000002708 Elmsan1E9Q2I4 1089 aaKnown RBP19.84■□□□□ 0.77
Shh-201ENSMUST00000002708 Abcc12Q80WJ6 1366 aa19.83■□□□□ 0.77
Shh-201ENSMUST00000002708 Babam1Q3UI43 333 aa19.83■□□□□ 0.77
Shh-201ENSMUST00000002708 EappQ5BU09 281 aa19.83■□□□□ 0.77
Shh-201ENSMUST00000002708 Unc5clQ6R653 518 aa19.83■□□□□ 0.77
Shh-201ENSMUST00000002708 St18Q80TY4 1045 aa19.83■□□□□ 0.77
Shh-201ENSMUST00000002708 Adcy9P51830 1353 aa19.83■□□□□ 0.76
Shh-201ENSMUST00000002708 Nid2O88322 1403 aa19.83■□□□□ 0.76
Shh-201ENSMUST00000002708 MccE9PWI3 1003 aa19.83■□□□□ 0.76
Shh-201ENSMUST00000002708 Becn1O88597 448 aa19.83■□□□□ 0.76
Shh-201ENSMUST00000002708 Tex2Q6ZPJ0 1128 aaKnown RBP19.82■□□□□ 0.76
Shh-201ENSMUST00000002708 Ccdc155Q80VJ8 648 aa19.82■□□□□ 0.76
Shh-201ENSMUST00000002708 Olfml1Q8BSH2 233 aa19.82■□□□□ 0.76
Shh-201ENSMUST00000002708 AnlnQ8K298 1121 aaKnown RBP19.82■□□□□ 0.76
Shh-201ENSMUST00000002708 Pof1bQ8K4L4 587 aa19.82■□□□□ 0.76
Shh-201ENSMUST00000002708 Kdm4aQ8BW72 1064 aa19.82■□□□□ 0.76
Shh-201ENSMUST00000002708 Gm10471E9Q1C7 252 aa19.81■□□□□ 0.76
Shh-201ENSMUST00000002708 Bach1P97302 739 aa19.81■□□□□ 0.76
Shh-201ENSMUST00000002708 Map3k2Q61083 619 aa19.81■□□□□ 0.76
Shh-201ENSMUST00000002708 Siglec1Q62230 1695 aa19.81■□□□□ 0.76
Shh-201ENSMUST00000002708 PtmsQ9D0J8 101 aaKnown RBP19.8■□□□□ 0.76
Shh-201ENSMUST00000002708 Tgfb1i1Q62219 461 aa19.8■□□□□ 0.76
Shh-201ENSMUST00000002708 Atg3Q9CPX6 314 aa19.8■□□□□ 0.76
Shh-201ENSMUST00000002708 BcorQ8CGN4 1759 aa19.8■□□□□ 0.76
Shh-201ENSMUST00000002708 Pcmtd1P59913 357 aa19.8■□□□□ 0.76
Shh-201ENSMUST00000002708 Bms1Q6PGF5 1284 aaKnown RBP19.8■□□□□ 0.76
Shh-201ENSMUST00000002708 Dzip1Q8BMD2 852 aa19.8■□□□□ 0.76
Shh-201ENSMUST00000002708 GckrQ91X44 587 aa19.8■□□□□ 0.76
Shh-201ENSMUST00000002708 Gse1Q3U3C9 1213 aa19.79■□□□□ 0.76
Shh-201ENSMUST00000002708 Zbtb45Q52KG4 520 aa19.79■□□□□ 0.76
Shh-201ENSMUST00000002708 Noc3lQ8VI84 807 aaKnown RBP19.79■□□□□ 0.76
Shh-201ENSMUST00000002708 Mindy4Q3UQI9 744 aa19.79■□□□□ 0.76
Shh-201ENSMUST00000002708 DpydQ8CHR6 1025 aa19.78■□□□□ 0.76
Shh-201ENSMUST00000002708 Pa2g4P50580 394 aaKnown RBP19.78■□□□□ 0.76
Shh-201ENSMUST00000002708 Cct4P80315 539 aaKnown RBP19.78■□□□□ 0.76
Shh-201ENSMUST00000002708 Pdcl2Q78Y63 240 aa19.78■□□□□ 0.76
Shh-201ENSMUST00000002708 Zbtb22Q9Z0G7 638 aa19.78■□□□□ 0.76
Shh-201ENSMUST00000002708 Ms4a2P20490 235 aa19.77■□□□□ 0.76
Shh-201ENSMUST00000002708 Utp18Q5SSI6 552 aaKnown RBP19.77■□□□□ 0.76
Shh-201ENSMUST00000002708 Zfp804bA0A0G2JGH6 1343 aa19.77■□□□□ 0.76
Shh-201ENSMUST00000002708 Evi5lH3BKQ3 813 aa19.77■□□□□ 0.76
Shh-201ENSMUST00000002708 GnpatP98192 678 aa19.77■□□□□ 0.76
Shh-201ENSMUST00000002708 EspnlQ3UYR4 1005 aa19.77■□□□□ 0.76
Shh-201ENSMUST00000002708 TnrQ8BYI9 1358 aa19.77■□□□□ 0.75
Shh-201ENSMUST00000002708 PsapQ61207 557 aaKnown RBP19.76■□□□□ 0.75
Shh-201ENSMUST00000002708 Samm50Q8BGH2 469 aa19.76■□□□□ 0.75
Shh-201ENSMUST00000002708 Slain2Q8CI08 581 aa19.76■□□□□ 0.75
Shh-201ENSMUST00000002708 Anapc15P60007 132 aa19.75■□□□□ 0.75
Shh-201ENSMUST00000002708 Unc13bQ9Z1N9 1602 aa19.75■□□□□ 0.75
Shh-201ENSMUST00000002708 Brf1Q8CFK2 676 aa19.75■□□□□ 0.75
Shh-201ENSMUST00000002708 Tceal9Q9DD24 104 aa19.75■□□□□ 0.75
Shh-201ENSMUST00000002708 Atp10bB1AWN4 1474 aa19.75■□□□□ 0.75
Shh-201ENSMUST00000002708 Gjb2Q00977 226 aa19.75■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms