RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 DUOX1Q9NRD9 1551 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 CHP2O43745 196 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 CBSLP0DN79 551 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 G6PDP11413 515 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 PRPS1L1P21108 318 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 CBSP35520 551 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 S100A10P60903 97 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 SNTA1Q13424 505 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 LASP1Q14847 261 aaKnown RBP10.85□□□□□ -0.67
LINC00346-201ENST00000538077 C4orf46Q504U0 113 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 CDCA2Q69YH5 1023 aaPredicted RBP10.85□□□□□ -0.67
LINC00346-201ENST00000538077 ARL9Q6T311 187 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 Q6ZVL8 140 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 SSX6Q7RTT6 188 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 TMEM151BQ8IW70 566 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF548Q8NEK5 533 aaPredicted RBP10.85□□□□□ -0.67
LINC00346-201ENST00000538077 LRRC58Q96CX6 371 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 IL17FQ96PD4 163 aa10.85□□□□□ -0.67
LINC00346-201ENST00000538077 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.85□□□□□ -0.67
LINC00346-201ENST00000538077 TRNAU1APQ9NX07 287 aaKnown RBP10.85□□□□□ -0.67
LINC00346-201ENST00000538077 EFCAB9A8MZ26 197 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 TSPAN6O43657 245 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 GABRA3P34903 492 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 PGGT1BP53609 377 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 KLHL22Q53GT1 634 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 ZDHHC12Q96GR4 267 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 OR52B2Q96RD2 323 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF717Q9BY31 904 aaPredicted RBP10.84□□□□□ -0.67
LINC00346-201ENST00000538077 ITM2CQ9NQX7 267 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 UCKL1Q9NWZ5 548 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 ATXN10Q9UBB4 475 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 PRDX6P30041 224 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 GRPRP30550 384 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 OR2B6P58173 313 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 RAB39AQ14964 217 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF805Q5CZA5 627 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 SLC30A8Q8IWU4 369 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 OR5T2Q8NGG2 359 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 CNDP2Q96KP4 475 aaKnown RBP10.84□□□□□ -0.67
LINC00346-201ENST00000538077 NLE1Q9NVX2 485 aaPredicted RBP10.84□□□□□ -0.67
LINC00346-201ENST00000538077 DOT1LQ8TEK3 1739 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 FABP12A6NFH5 140 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 PRAMEF11O60813 436 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 GPR32O75388 356 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 RPLP0P05388 317 aaKnown RBP10.84□□□□□ -0.67
LINC00346-201ENST00000538077 CD2P06729 351 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 BICRALQ6AI39 1079 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 SMG8Q8ND04 991 aaKnown RBP10.84□□□□□ -0.67
LINC00346-201ENST00000538077 OR4K1Q8NGD4 311 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 FANK1Q8TC84 345 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 IGSF8Q969P0 613 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 PNPLA2Q96AD5 504 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF670-ZNF695F2Z2N8 137 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 F2P00734 622 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 GPIP06744 558 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 ARPC4P59998 168 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 SERINC3Q13530 473 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 DSC3Q14574 896 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 SGCAQ16586 387 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 FLYWCH1Q4VC44 716 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 FOXR2Q6PJQ5 311 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 TMIGD1Q6UXZ0 262 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 ABHD5Q8WTS1 349 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 PTCHD1Q96NR3 888 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 CMKLR1Q99788 373 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 NPLQ9BXD5 320 aaPredicted RBP10.84□□□□□ -0.67
LINC00346-201ENST00000538077 POLR2J2Q9GZM3 115 aaKnown RBP10.84□□□□□ -0.67
LINC00346-201ENST00000538077 NSUN3Q9H649 340 aaKnown RBP10.84□□□□□ -0.67
LINC00346-201ENST00000538077 A0A1W2PQU0 124 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 NPIPA2E9PIF3 369 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 NPIPA3F8WFD2 350 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 L7N2F9 121 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 VAMP2P63027 116 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 ECH1Q13011 328 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 TIGD6Q17RP2 521 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 MSS51Q4VC12 460 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 EGFLAMQ63HQ2 1017 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 TMEM107Q6UX40 140 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 TMEM110Q86TL2 294 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 TICAM1Q8IUC6 712 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 APCDD1Q8J025 514 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 MFSD2AQ8NA29 543 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 ZBTB8BQ8NAP8 495 aaPredicted RBP10.84□□□□□ -0.67
LINC00346-201ENST00000538077 OR8S1Q8NH09 359 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 EFCAB11Q9BUY7 163 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 CADM1Q9BY67 442 aaKnown RBP10.84□□□□□ -0.67
LINC00346-201ENST00000538077 CD244Q9BZW8 370 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 PCDHGB7Q9Y5F8 929 aa10.84□□□□□ -0.67
LINC00346-201ENST00000538077 K7ERQ8 282 aa10.83□□□□□ -0.68
LINC00346-201ENST00000538077 ARPC2O15144 300 aa10.83□□□□□ -0.68
LINC00346-201ENST00000538077 TRMUO75648 421 aaKnown RBP10.83□□□□□ -0.68
LINC00346-201ENST00000538077 H1F0P07305 194 aaKnown RBP10.83□□□□□ -0.68
LINC00346-201ENST00000538077 KCNE1P15382 129 aa10.83□□□□□ -0.68
LINC00346-201ENST00000538077 AP3S2P59780 193 aa10.83□□□□□ -0.68
LINC00346-201ENST00000538077 DSG2Q14126 1118 aa10.83□□□□□ -0.68
LINC00346-201ENST00000538077 RAB43Q86YS6 212 aa10.83□□□□□ -0.68
LINC00346-201ENST00000538077 EPYCQ99645 322 aa10.83□□□□□ -0.68
LINC00346-201ENST00000538077 UPB1Q9UBR1 384 aa10.83□□□□□ -0.68
LINC00346-201ENST00000538077 ACTL7AQ9Y615 435 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms