RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 NDRG4Q9ULP0 352 aaKnown RBP13.38□□□□□ -0.27
SDC1-202ENST00000381150 PCDHGA6Q9Y5G7 932 aa13.38□□□□□ -0.27
SDC1-202ENST00000381150 A0A0X1KG70 313 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 CLIC1O00299 241 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 TNFRSF11BO00300 401 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 OR7A17O14581 309 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 APOL3O95236 402 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 FEN1P39748 380 aaKnown RBP13.37□□□□□ -0.27
SDC1-202ENST00000381150 RPS14P62263 151 aaKnown RBP13.37□□□□□ -0.27
SDC1-202ENST00000381150 SPIBQ01892 262 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 FADDQ13158 208 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 TSTA3Q13630 321 aaPredicted RBP13.37□□□□□ -0.27
SDC1-202ENST00000381150 QPRTQ15274 297 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 IQCF2Q8IXL9 164 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 ZNF566Q969W8 418 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 ELOVL6Q9H5J4 265 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 IL1RAPQ9NPH3 570 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 CFL2Q9Y281 166 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 PRKAB1Q9Y478 270 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 ZFP37Q9Y6Q3 630 aaPredicted RBP13.37□□□□□ -0.27
SDC1-202ENST00000381150 SCN5AQ14524 2016 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 FABP12A6NFH5 140 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 CLCA1A8K7I4 914 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 F5H5T6 163 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 STX16O14662 325 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 CTPS1P17812 591 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 SCN1BQ07699 218 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 ZNF267Q14586 743 aaPredicted RBP13.37□□□□□ -0.27
SDC1-202ENST00000381150 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.37□□□□□ -0.27
SDC1-202ENST00000381150 ANKS3Q6ZW76 656 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 CDH24Q86UP0 819 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 LSRQ86X29 649 aaPredicted RBP13.37□□□□□ -0.27
SDC1-202ENST00000381150 SLC5A8Q8N695 610 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 HCAR2Q8TDS4 363 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 FRMD6Q96NE9 622 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 PSKH2Q96QS6 385 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 CIPCQ9C0C6 399 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 I3L521 148 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 OR2B3O76000 313 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 RETP07949 1114 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 TIE1P35590 1138 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 SGSHP51688 502 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 RPS24P62847 133 aaKnown RBP13.37□□□□□ -0.27
SDC1-202ENST00000381150 POU6F2P78424 691 aaPredicted RBP13.37□□□□□ -0.27
SDC1-202ENST00000381150 LRRC74AQ0VAA2 488 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 MRPL28Q13084 256 aaKnown RBP13.37□□□□□ -0.27
SDC1-202ENST00000381150 LRRC66Q68CR7 880 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 SLC8B1Q6J4K2 584 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 CHPFQ8IZ52 775 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 OR8H3Q8N146 312 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 FBXO22Q8NEZ5 403 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 OR9Q2Q8NGE9 314 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 OR9Q1Q8NGQ5 310 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 CCDC115Q96NT0 180 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 MKRN2Q9H000 416 aaKnown RBP13.37□□□□□ -0.27
SDC1-202ENST00000381150 RETREG1Q9H6L5 497 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 ZNF556Q9HAH1 456 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 C11orf16Q9NQ32 467 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 C12orf4Q9NQ89 552 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 SNX7Q9UNH6 387 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 RABL2BQ9UNT1 228 aa13.37□□□□□ -0.27
SDC1-202ENST00000381150 H7C4K7 107 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 FPGTO14772 594 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 BNIP3LO60238 219 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 CCNDBP1O95273 360 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 F11P03951 625 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 KDELR2P33947 212 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 ATP5C1P36542 298 aaKnown RBP13.36□□□□□ -0.27
SDC1-202ENST00000381150 RPS19P39019 145 aaKnown RBP13.36□□□□□ -0.27
SDC1-202ENST00000381150 GPR50Q13585 617 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 SPDYE7PQ495Y7 208 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 CLECL1Q8IZS7 167 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 SPERTQ8NA61 448 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 B3GNT7Q8NFL0 401 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 SLC7A6Q92536 515 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 FCGR1BQ92637 280 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 PMEPA1Q969W9 287 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 ZSCAN5AQ9BUG6 496 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 VN1R3Q9BXE9 311 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 CLPBQ9H078 707 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 NARFLQ9H6Q4 476 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 COMMD3Q9UBI1 195 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 A0A0G2JMP0 313 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 ZNF840PA6NDX5 716 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 CBX4O00257 560 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 KDELR3O43731 214 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 PLOD3O60568 738 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 CDRT1O95170 752 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 INHAP05111 366 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 CDK1P06493 297 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 HMGA1P17096 107 aaKnown RBP13.36□□□□□ -0.27
SDC1-202ENST00000381150 RFX2P48378 723 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 ZNF140P52738 457 aaPredicted RBP13.36□□□□□ -0.27
SDC1-202ENST00000381150 MAPK12P53778 367 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 CDH4P55283 916 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 CAV3P56539 151 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 CXCR4P61073 352 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 FAM151BQ6UXP7 276 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 PTCHD4Q6ZW05 846 aa13.36□□□□□ -0.27
SDC1-202ENST00000381150 ABI3BPQ7Z7G0 1075 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms