RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 GPC3P51654 580 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 VAMP7P51809 220 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 C21orf58P58505 322 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 CDR2Q01850 454 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 FAM27E3Q08E93 113 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 MAMLD1Q13495 774 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 EFNB3Q15768 340 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 USP41Q3LFD5 358 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 COLEC12Q5KU26 742 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 RNF168Q8IYW5 571 aaPredicted RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ARHGAP24Q8N264 748 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 XXYLT1Q8NBI6 393 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 AGAP11Q8TF27 550 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ZFAND2BQ8WV99 257 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 TMEM170AQ8WVE7 144 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ZNF707Q96C28 371 aaPredicted RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ARHGEF26Q96DR7 871 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 PCYT2Q99447 389 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 SPRY4Q9C004 299 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 VCXQ9H320 206 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ESRP2Q9H6T0 727 aaKnown RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 C17orf75Q9HAS0 396 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ZNF302Q9NR11 478 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 SIRT3Q9NTG7 399 aaPredicted RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 BTBD3Q9Y2F9 522 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 MTCL1Q9Y4B5 1905 aaKnown RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 KMT2BQ9UMN6 2715 aaPredicted RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ARHGEF35A5YM69 484 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 A8MV72 311 aaPredicted RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 TNFRSF13BO14836 293 aaPredicted RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 SEC14L2O76054 403 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 C22orf31O95567 290 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 FGF19O95750 216 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 LCATP04180 440 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ATP6V1C1P21283 382 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 MARK3P27448 753 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 BSGP35613 385 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 CASP2P42575 452 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 CENPAP49450 140 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 CASP4P49662 377 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 MXI1P50539 228 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 IFI35P80217 286 aaPredicted RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 GCNT1Q02742 428 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 GPR18Q14330 331 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 E2F5Q15329 346 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 PDK4Q16654 411 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 PPM1LQ5SGD2 360 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 LRRC38Q5VT99 294 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 IRGCQ6NXR0 463 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 NCEH1Q6PIU2 408 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 CHST9Q7L1S5 443 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ZNF367Q7RTV3 350 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 IGFN1Q86VF2 1251 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 SYCP3Q8IZU3 236 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ARHGAP18Q8N392 663 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 C11orf65Q8NCR3 313 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 OR2AK2Q8NG84 335 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ADAMTS14Q8WXS8 1223 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 RNF183Q96D59 192 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 STAMBPL1Q96FJ0 436 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 NAF1Q96HR8 494 aaKnown RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 FIZ1Q96SL8 496 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 GAD1Q99259 594 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 TEKT3Q9BXF9 490 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 PITPNM3Q9BZ71 974 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 DCLK3Q9C098 648 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 CPVLQ9H3G5 476 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 DCLRE1BQ9H816 532 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 MRPL47Q9HD33 250 aaKnown RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ABCF3Q9NUQ8 709 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 TBC1D13Q9NVG8 400 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 FGFR1OP2Q9NVK5 253 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 EURLQ9NYK6 297 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ELOVL5Q9NYP7 299 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 DNAJB4Q9UDY4 337 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ASIC3Q9UHC3 531 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ANAPC5Q9UJX4 755 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 NOCTQ9UK39 431 aaKnown RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 FBXW11Q9UKB1 542 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 R3HDM2Q9Y2K5 976 aaKnown RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 IGLV3-22A0A075B6J6 115 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 LRRD1A4D1F6 860 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 VCYO14598 125 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 TM9SF1O15321 606 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 CNOT3O75175 753 aaKnown RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 NEBLO76041 1014 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 SLITRK3O94933 977 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 TGDSO95455 350 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 TROVE2P10155 538 aaKnown RBP eCLIP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 PSG1P11464 419 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 GNAZP19086 355 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 PTPN4P29074 926 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 HOXA13P31271 388 aaPredicted RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 PHBP35232 272 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 SLC11A1P49279 550 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 NOVA1P51513 510 aaKnown RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 RPL26P61254 145 aaKnown RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 YWHAZP63104 245 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms