RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Kxd1Q80XH1 177 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Lurap1lQ8K2P1 221 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Zfp991Q8R1N3 573 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Trim12aQ99PQ1 284 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Dph2Q9CR25 489 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Creb3l4Q9D2A5 370 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Sohlh2Q9D489 467 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Fundc2Q9D6K8 151 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 TesclQ9DAJ7 231 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Mrpl40Q9Z2Q5 206 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Gm7173A0A0G2JEB6 3132 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Gm6569D3YTM9 175 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Vmn1r238E9Q373 306 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 PigfO09101 219 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Timp2P25785 220 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Kcnj13P86046 360 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Phf12Q5SPL2 1003 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Sim1Q61045 765 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Irf4Q64287 450 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 OmpQ64288 163 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Klhl42Q8BFQ9 493 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Mrpl38Q8K2M0 380 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Slc8a2Q8K596 921 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Cdc16Q8R349 620 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Dapk2Q8VDF3 370 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Fam3cQ91VU0 227 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Gstt3Q99L20 241 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Ms4a10Q99N03 267 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Cldnd1Q9CQX5 253 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Acsl4Q9QUJ7 711 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 SqorQ9R112 450 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 ArntlQ9WTL8 632 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 ProdhQ9WU79 599 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Cep290Q6A078 2472 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Adh6bA0A1D5RMB0 384 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Bnc1O35914 961 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Sat1P48026 171 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Sox2P48432 319 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Defb48Q3UW22 87 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Armc5Q5EBP3 926 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 MarcoQ60754 518 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Elavl3Q60900 367 aaKnown RBP12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Nudcd1Q6PIP5 582 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Kiaa1671Q8BRV5 308 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Gucy1b2Q8BXH3 824 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Lsm1Q8VC85 133 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Slc26a5Q99NH7 744 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Uqcc2Q9CQY6 136 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Rgs20Q9QZB1 239 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Brca2P97929 3329 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Nlrp1bA1Z198 1177 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Slc28a1E9PXX9 648 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 AprtP08030 180 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Pcmt1P23506 227 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Mbl1P39039 239 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Igfbp2P47877 305 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Itga2Q62469 1178 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Prox2Q8BII1 593 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Bend7Q8BSV3 434 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 IrgcQ8C262 412 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Zfp57Q8C6P8 421 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Olfr183Q8VFB9 309 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Rbm47Q91WT8 590 aaKnown RBP12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Fars2Q99M01 451 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Tmem8aQ9ESN3 769 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Atp6ap1Q9R1Q9 463 aa12.99□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Cacna1eQ61290 2272 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Ajm1A2AJA9 974 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Vsig10lD3YZF7 868 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Hcn1O88704 910 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Chrm4P32211 479 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Map3k7clP58500 142 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Tmc5Q32NZ6 967 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Ankrd27Q3UMR0 1048 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Zfp868Q3UTQ6 422 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Olfr381Q5SSP0 311 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Fam189a1Q6A044 515 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 PapolgQ6PCL9 739 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Cnih3Q6ZWS4 160 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Ikzf5Q8BU00 419 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Wdr47Q8CGF6 920 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Slc45a3Q8K0H7 553 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Plac9Q8K262 108 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Klrb1fQ8VD98 217 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Chid1Q922Q9 393 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Sec13Q9D1M0 322 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Amdhd1Q9DBA8 426 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 ScelQ9EQG3 652 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Rpl38Q9JJI8 70 aaKnown RBP12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Psma4Q9R1P0 261 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Coro1bQ9WUM3 484 aaKnown RBP12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Crybg1A0A0G2JG52 2065 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Skint8A7XV07 398 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Vmn2r125D3Z3M1 369 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 HmbsP22907 361 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Tmprss9P69525 1065 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 SgcdP82347 289 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Anxa4P97429 319 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Shcbp1lQ3TTP0 639 aa12.98□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Gm5460Q3UQ97 254 aa12.98□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms