RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 KCNS3Q9BQ31 491 aa22.38■■□□□ 1.17
NPAS3-206ENST00000548645 TMEM246Q9BRR3 403 aa22.38■■□□□ 1.17
NPAS3-206ENST00000548645 GPR63Q9BZJ6 419 aa22.38■■□□□ 1.17
NPAS3-206ENST00000548645 RDH14Q9HBH5 336 aa22.38■■□□□ 1.17
NPAS3-206ENST00000548645 MAGEB17A8MXT2 336 aa22.38■■□□□ 1.17
NPAS3-206ENST00000548645 SCAMP3O14828 347 aaKnown RBP22.38■■□□□ 1.17
NPAS3-206ENST00000548645 SEMA3DO95025 777 aa22.38■■□□□ 1.17
NPAS3-206ENST00000548645 RACK1P63244 317 aaKnown RBP22.38■■□□□ 1.17
NPAS3-206ENST00000548645 MTAPQ13126 283 aa22.38■■□□□ 1.17
NPAS3-206ENST00000548645 IRF3Q14653 427 aa22.38■■□□□ 1.17
NPAS3-206ENST00000548645 RBFAQ8N0V3 343 aa22.38■■□□□ 1.17
NPAS3-206ENST00000548645 ZBTB2Q8N680 514 aa22.38■■□□□ 1.17
NPAS3-206ENST00000548645 EGLN2Q96KS0 407 aa22.38■■□□□ 1.17
NPAS3-206ENST00000548645 DPH2Q9BQC3 489 aaPredicted RBP22.38■■□□□ 1.17
NPAS3-206ENST00000548645 PCDHB5Q9Y5E4 795 aa22.38■■□□□ 1.17
NPAS3-206ENST00000548645 TDRD15B5MCY1 1934 aaKnown RBP22.38■■□□□ 1.17
NPAS3-206ENST00000548645 GFRA2O00451 464 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 TPD52L2O43399 206 aaKnown RBP22.37■■□□□ 1.17
NPAS3-206ENST00000548645 CTPS1P17812 591 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 CD72P21854 359 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 HNF4AP41235 474 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 TAF10Q12962 218 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 SPRYD7Q5W111 196 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 FAM124AQ86V42 546 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 PHOX2BQ99453 314 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 C3orf14Q9HBI5 128 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 ADPRHL2Q9NX46 363 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 ZFP37Q9Y6Q3 630 aaPredicted RBP22.37■■□□□ 1.17
NPAS3-206ENST00000548645 CHD5Q8TDI0 1954 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 AP3D1O14617 1153 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 SUV39H1O43463 412 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 CHRNB1P11230 501 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 PRPH2P23942 346 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 TNFSF8P32971 234 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 CDH4P55283 916 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 ARMC4Q5T2S8 1044 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 PPP2R2DQ66LE6 453 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 DKK3Q9UBP4 350 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 KCNJ10P78508 379 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 DMRTB1Q96MA1 342 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 BOCQ9BWV1 1114 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 LATS2Q9NRM7 1088 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 ZNF451Q9Y4E5 1061 aa22.37■■□□□ 1.17
NPAS3-206ENST00000548645 TNFRSF11BO00300 401 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 TRAPPC2P0DI81 140 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 TRAPPC2BP0DI82 140 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 PRKCAP17252 672 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 ITGA2P17301 1181 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 PRPS1L1P21108 318 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 SLC6A4P31645 630 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 KCNQ1P51787 676 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 CRISP3P54108 245 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 SRSF11Q05519 484 aaKnown RBP22.36■■□□□ 1.17
NPAS3-206ENST00000548645 E2F2Q14209 437 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 APOLD1Q96LR9 279 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 NEDD4LQ96PU5 975 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 RETREG1Q9H6L5 497 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 ZNF226Q9NYT6 803 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 PADI2Q9Y2J8 665 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 CBX4O00257 560 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 OAZ2O95190 189 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 ZNF865P0CJ78 1059 aaPredicted RBP22.36■■□□□ 1.17
NPAS3-206ENST00000548645 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.36■■□□□ 1.17
NPAS3-206ENST00000548645 MBOAT1Q6ZNC8 495 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 CLDN19Q8N6F1 224 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 APIPQ96GX9 242 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 SLC32A1Q9H598 525 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 SLA2Q9H6Q3 261 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 POFUT2Q9Y2G5 429 aa22.36■■□□□ 1.17
NPAS3-206ENST00000548645 A0A0U1RQF3 1178 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 HMX3A6NHT5 357 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 ADAMDEC1O15204 470 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 ANXA5P08758 320 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 HMGCLP35914 325 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 PURAQ00577 322 aaKnown RBP22.35■■□□□ 1.17
NPAS3-206ENST00000548645 IRF5Q13568 498 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 TBRG1Q3YBR2 411 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 C19orf48Q6RUI8 117 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 FAM151BQ6UXP7 276 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 SYNPOQ8N3V7 929 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 OR10G2Q8NGC3 310 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 IMPAD1Q9NX62 359 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 SLC45A1Q9Y2W3 748 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 PCDHGA2Q9Y5H1 932 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 ANXA8P13928 327 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 GABRB1P18505 474 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 GNG2P59768 71 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 TWF1Q12792 350 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 PPIGQ13427 754 aaKnown RBP eCLIP22.35■■□□□ 1.17
NPAS3-206ENST00000548645 SLC5A8Q8N695 610 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 PSD4Q8NDX1 1056 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 CSGALNACT1Q8TDX6 532 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 TRIM63Q969Q1 353 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 MGLLQ99685 303 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 SMURF1Q9HCE7 757 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 PRSS21Q9Y6M0 314 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 GREB1Q4ZG55 1949 aa22.35■■□□□ 1.17
NPAS3-206ENST00000548645 A8MV72 311 aaPredicted RBP22.34■■□□□ 1.17
NPAS3-206ENST00000548645 CCRL2O00421 344 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 ARHGAP33O14559 1287 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms