RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 SynbQ8BI41 618 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 MaobQ8BW75 520 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Nrip1Q8CBD1 1161 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Abhd11Q8K4F5 307 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ccdc58Q8R3Q6 144 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr1276Q8VF40 312 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Prl7c1Q9CRB5 251 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 TrmuQ9DAT5 417 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Sae1Q9R1T2 350 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 A0A286YDU1 74 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cldn34b1B1AZQ8 209 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Klhl3E0CZ16 587 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Zfp384E9Q1A5 584 aaKnown RBP10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Pot1bH7BX60 640 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Sp1O89090 784 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Esr1P19785 599 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Sox6P40645 827 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rab8aP55258 207 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Kcnab2P62482 367 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rps3aP97351 264 aaKnown RBP10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Xkr9Q5GH62 373 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cep44Q5HZK1 386 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 BC080695Q66JY9 481 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Acat3Q80X81 397 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Atl1Q8BH66 558 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rcn3Q8BH97 328 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ebf4Q8K4J2 599 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Vmn1r22Q8R2D1 302 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Upk1aQ9D132 257 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rnf186Q9D241 226 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cldn34b2Q9D9N2 209 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Uba7Q9DBK7 977 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 CasrQ9QY96 1079 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 HnrnpfQ9Z2X1 415 aaKnown RBP10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Nrxn2E9Q7X7 1710 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Kctd14A0A0U1RNG7 287 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 SpaarA0A1B0GSZ0 75 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Sec14l5B2RXM5 696 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Vmn2r24D3YUI0 854 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 E9Q0B3 247 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ceacam3E9Q6J4 706 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Vmn2r86G5E8Y4 848 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm29394H3BIW7 199 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm17019K7N6W5 255 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Polr2jO08740 117 aaKnown RBP10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gp5O08742 567 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gdi1P50396 447 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 SgcdP82347 289 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rsrp1Q3UC65 298 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Pex5lQ8C437 567 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Smco1Q8CEZ1 214 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ferd3lQ923Z4 168 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ankra2Q99PE2 312 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Prdm5Q9CXE0 599 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Kat8Q9D1P2 458 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 9030624G23RikQ9D308 155 aa10.58□□□□□ -0.72
Msh3-201ENSMUST00000022220 Vmn1r176G3UW31 304 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 5730507C01RikJ3QPX0 416 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Fkbp7O54998 218 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Sox2P48432 319 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rin3P59729 980 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Polr2iP60898 125 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Dppa5bP85965 119 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Coq8aQ60936 645 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rslcan18Q7M6X5 460 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Phf24Q80TL4 400 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gpr171Q8BG55 319 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Fignl1Q8BPY9 683 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ptpn7Q8BUM3 359 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ttc34Q8C0Q3 554 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Fam155aQ8CCS2 467 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr53Q8VGL8 312 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Fars2Q99M01 451 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Atp5f1Q9CQQ7 256 aaKnown RBP10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 RtcAQ9D7H3 366 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gtf2e2Q9D902 292 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Pin1Q9QUR7 165 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 FarsbQ9WUA2 589 aaKnown RBP10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cst9Q9Z0H6 137 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 RgrQ9Z2B3 291 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Trpm6Q8CIR4 2028 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Fbxo47A2A6H3 451 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 CtcflA2APF3 636 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm17615E9Q9P2 165 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 PigfO09101 219 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 DxoO70348 397 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Klf10O89091 479 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 EnpepP16406 945 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gabrb3P63080 473 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 MitfQ08874 526 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Hhla1Q3TYV2 514 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rnf43Q5NCP0 784 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Slc10a7Q5PT53 340 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Dnajc11Q5U458 559 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Sim1Q61045 765 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Zrsr1Q64707 428 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 R3hcc1lQ8BJM3 775 aaKnown RBP10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Akr1d1Q8VCX1 325 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr525Q8VGL5 309 aa10.57□□□□□ -0.72
Msh3-201ENSMUST00000022220 Dio3Q91ZI8 304 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 59.6 ms