Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Gm25239-201ENSMUST00000174915 86 ntBASIC32.97■■■□□ 2.87
Ptpn7Q8BUM3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ptpn7Q8BUM3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ptpn7Q8BUM3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
Ptpn7Q8BUM3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Ptpn7Q8BUM3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Ptpn7Q8BUM3 Psd-208ENSMUST00000224556 2034 ntBASIC29.74■■■□□ 2.35
Ptpn7Q8BUM3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ptpn7Q8BUM3 Gm15042-201ENSMUST00000120212 883 ntBASIC29.48■■■□□ 2.31
Ptpn7Q8BUM3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ptpn7Q8BUM3 Gm15045-201ENSMUST00000117359 883 ntBASIC28.9■■■□□ 2.22
Ptpn7Q8BUM3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ptpn7Q8BUM3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ptpn7Q8BUM3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.78■■■□□ 2.2
Ptpn7Q8BUM3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ptpn7Q8BUM3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ptpn7Q8BUM3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ptpn7Q8BUM3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ptpn7Q8BUM3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ptpn7Q8BUM3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ptpn7Q8BUM3 Gm24109-201ENSMUST00000175489 103 ntBASIC28.23■■■□□ 2.11
Ptpn7Q8BUM3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ptpn7Q8BUM3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ptpn7Q8BUM3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ptpn7Q8BUM3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
Ptpn7Q8BUM3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ptpn7Q8BUM3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.93■■■□□ 2.06
Ptpn7Q8BUM3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ptpn7Q8BUM3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ptpn7Q8BUM3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Ptpn7Q8BUM3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.74■■■□□ 2.03
Ptpn7Q8BUM3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ptpn7Q8BUM3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ptpn7Q8BUM3 Gm23366-201ENSMUST00000175022 89 ntBASIC27.65■■■□□ 2.02
Ptpn7Q8BUM3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Ptpn7Q8BUM3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Ptpn7Q8BUM3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Ptpn7Q8BUM3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Ptpn7Q8BUM3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ptpn7Q8BUM3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ptpn7Q8BUM3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.29■■□□□ 1.96
Ptpn7Q8BUM3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Ptpn7Q8BUM3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.26■■□□□ 1.95
Ptpn7Q8BUM3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Ptpn7Q8BUM3 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.19■■□□□ 1.94
Ptpn7Q8BUM3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ptpn7Q8BUM3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ptpn7Q8BUM3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.1■■□□□ 1.93
Ptpn7Q8BUM3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Ptpn7Q8BUM3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
Ptpn7Q8BUM3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ptpn7Q8BUM3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ptpn7Q8BUM3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.67■■□□□ 1.86
Ptpn7Q8BUM3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ptpn7Q8BUM3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ptpn7Q8BUM3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.54■■□□□ 1.84
Ptpn7Q8BUM3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ptpn7Q8BUM3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ptpn7Q8BUM3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptpn7Q8BUM3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ptpn7Q8BUM3 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.35■■□□□ 1.81
Ptpn7Q8BUM3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ptpn7Q8BUM3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ptpn7Q8BUM3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Ptpn7Q8BUM3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Ptpn7Q8BUM3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ptpn7Q8BUM3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.22■■□□□ 1.79
Ptpn7Q8BUM3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ptpn7Q8BUM3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ptpn7Q8BUM3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Ptpn7Q8BUM3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ptpn7Q8BUM3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.09■■□□□ 1.77
Ptpn7Q8BUM3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ptpn7Q8BUM3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ptpn7Q8BUM3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.07■■□□□ 1.76
Ptpn7Q8BUM3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ptpn7Q8BUM3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Ptpn7Q8BUM3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ptpn7Q8BUM3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ptpn7Q8BUM3 Gm27325-201ENSMUST00000175467 74 ntBASIC25.94■■□□□ 1.74
Ptpn7Q8BUM3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ptpn7Q8BUM3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ptpn7Q8BUM3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ptpn7Q8BUM3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ptpn7Q8BUM3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Ptpn7Q8BUM3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ptpn7Q8BUM3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ptpn7Q8BUM3 Gm25238-201ENSMUST00000174914 89 ntBASIC25.78■■□□□ 1.72
Ptpn7Q8BUM3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.75■■□□□ 1.71
Ptpn7Q8BUM3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ptpn7Q8BUM3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ptpn7Q8BUM3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.73■■□□□ 1.71
Ptpn7Q8BUM3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ptpn7Q8BUM3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ptpn7Q8BUM3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Ptpn7Q8BUM3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.65■■□□□ 1.7
Ptpn7Q8BUM3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptpn7Q8BUM3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptpn7Q8BUM3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ptpn7Q8BUM3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms