RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 MUS81Q96NY9 551 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 FCRL3Q96P31 734 aaPredicted RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 SLC2A13Q96QE2 648 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 SEZ6LQ9BYH1 1024 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 TBC1D17Q9HA65 648 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 TPT1P8Q9HAU6 139 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 PCDHGB1Q9Y5G3 927 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 COLEC10Q9Y6Z7 277 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 MYH9P35579 1960 aaKnown RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 PRAMEF11O60813 436 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 H1F0P07305 194 aaKnown RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 CYBAP13498 195 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 ZNF182P17025 639 aaPredicted RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 ARFIP1P53367 373 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 CDK6Q00534 326 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 MYBPC1Q00872 1141 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 CBLBQ13191 982 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 KCNAB2Q13303 367 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 OLIG2Q13516 323 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 EIPR1Q53HC9 387 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 C10orf62Q5T681 223 aaPredicted RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 SLC22A16Q86VW1 577 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 TRUB1Q8WWH5 349 aaKnown RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 HAVCR1Q96D42 359 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 AHCYL2Q96HN2 611 aaKnown RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 LRCH3Q96II8 777 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 HERPUD2Q9BSE4 406 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 DSN1Q9H410 356 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 ZCCHC3Q9NUD5 404 aaKnown RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 COMMD3Q9UBI1 195 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 RNF6Q9Y252 685 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 EYSQ5T1H1 3165 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 LOC730098B7Z3J9 87 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 TLR4O00206 839 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 DCLK1O15075 740 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 OR1F1O43749 312 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 HCN1O60741 890 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 NFATC1O95644 943 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 GSTT2BP0CG30 244 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 HSD17B1P14061 328 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 ATF6P18850 670 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 RFC2P35250 354 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 PCDH1Q08174 1060 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 PIGGQ5H8A4 983 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 LYSMD3Q7Z3D4 306 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 ARL14EPQ8N8R7 260 aaPredicted RBP8.16□□□□□ -1.1
VPS36-201ENST00000378060 DNASE1L2Q92874 299 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 ART5Q96L15 291 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 RANBP9Q96S59 729 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 SLC35A5Q9BS91 424 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 NLE1Q9NVX2 485 aaPredicted RBP8.16□□□□□ -1.1
VPS36-201ENST00000378060 AASSQ9UDR5 926 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 IKZF2Q9UKS7 526 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 PCDHGB7Q9Y5F8 929 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 PRAMEF33A0A0G2JMD5 474 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 PRAMEF10O60809 474 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 IGHA2P01877 340 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 IFNA6P05013 189 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 IL7RP16871 459 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 EFNA1P20827 205 aaPredicted RBP8.16□□□□□ -1.1
VPS36-201ENST00000378060 DIO3P55073 304 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 RAB39AQ14964 217 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 FAM171BQ6P995 826 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 SLITRK4Q8IW52 837 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 UMODL1-AS1Q8N2C9 162 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 KLHL36Q8N4N3 616 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 TNFAIP8L1Q8WVP5 186 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 IMP4Q96G21 291 aaKnown RBP8.16□□□□□ -1.1
VPS36-201ENST00000378060 GFM1Q96RP9 751 aaKnown RBP8.16□□□□□ -1.1
VPS36-201ENST00000378060 LRRC14BA6NHZ5 514 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 DFNA5O60443 496 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 PRAMEF12O95522 483 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 TBX18O95935 607 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 SLC35G6P0C7Q6 338 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 BMP2P12643 396 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 ACSL1P33121 698 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 ACVRL1P37023 503 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 GRIA2P42262 883 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 MAGEA11P43364 429 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 ZNF423Q2M1K9 1284 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 TNFAIP8L2Q6P589 184 aaPredicted RBP8.16□□□□□ -1.1
VPS36-201ENST00000378060 ZNF517Q6ZMY9 492 aaPredicted RBP8.16□□□□□ -1.1
VPS36-201ENST00000378060 ZDHHC14Q8IZN3 488 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 NAT16Q8N8M0 369 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 SMG7Q92540 1137 aaKnown RBP8.16□□□□□ -1.1
VPS36-201ENST00000378060 GATA6Q92908 595 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 KCNC2Q96PR1 638 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 SLC30A2Q9BRI3 323 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 RAB11FIP5Q9BXF6 653 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 KCNH6Q9H252 994 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 AIG1Q9NVV5 245 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 ZDHHC7Q9NXF8 308 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 ERVW-1Q9UQF0 538 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 HCN4Q9Y3Q4 1203 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 N6AMT1Q9Y5N5 214 aa8.16□□□□□ -1.1
VPS36-201ENST00000378060 TRBC2A0A5B9 178 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 DAPL1A0PJW8 107 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 ENPP3O14638 875 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 PDCD5O14737 125 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 HLA-DPB1P04440 258 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms