RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gpat2Q14DK4 801 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ermp1Q3UVK0 898 aaKnown RBP11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Fam189bQ5HZJ5 669 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Tmem270Q6UJB9 264 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 PdprQ7TSQ8 878 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ifnl3Q8CGK6 193 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Mfsd14bQ8CIA9 507 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Vmn1r215Q8R264 300 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Utp6Q8VCY6 597 aaKnown RBP11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 PxnQ8VI36 591 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Eif2b2Q99LD9 351 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ilf2Q9CXY6 390 aaKnown RBP11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Mkrn2Q9ERV1 416 aaKnown RBP11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Cfap54Q8C6S9 3106 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Spag17Q5S003 2320 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 4930402K13RikB1AW18 415 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Gm10718D3Z1I7 227 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ccnb1ip1D3Z3K2 276 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 A530032D15RikE9Q422 215 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Vmn2r10K7N621 847 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Vmn2r112L7N221 857 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Pabpc1P29341 636 aaKnown RBP11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Erp29P57759 262 aaKnown RBP11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 MybphP70402 483 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Arf5P84084 180 aaKnown RBP11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Nr4a2Q06219 598 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Kcnh6Q32ME0 950 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Usp39Q3TIX9 564 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Acsm3Q3UNX5 580 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Fstl1Q62356 306 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Fam110bQ8C739 366 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Appl1Q8K3H0 707 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ttc4Q8R3H9 386 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Mtfr2Q8VED8 361 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Olfr398Q8VFY0 314 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Fads1Q920L1 447 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Moxd1Q9CXI3 613 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ccdc81Q9D5W4 654 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ptges3lQ9D9A7 131 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Znrf4Q9DAH2 327 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Foxe3Q9QY14 288 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 HephQ9Z0Z4 1157 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Upk1bQ9Z2C6 260 aa11.25□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Gm10800D3Z496 220 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Gm17093F6XGJ4 214 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Gja1P23242 382 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Akt1P31750 480 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Pax7P47239 503 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Rps3aP97351 264 aaKnown RBP11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Scn1bP97952 218 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 March5Q3KNM2 278 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Xrra1Q3U3V8 786 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 A630001G21RikQ3UTB2 229 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 MagixQ4KL35 324 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 C2cd4cC2CD4Q5HZI2 419 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Hmbox1Q8BJA3 419 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Tmem125Q8CHQ6 216 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Metap1dQ9CPW9 335 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 MINDY3Q9CV28 444 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Yif1bQ9CX30 311 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Nudt14Q9D142 222 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Rcan2Q9JHG2 197 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Tcf7l1Q9Z1J1 584 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Gm13089A2AGW7 455 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Olfr564E9PWA8 316 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Il1aP01582 270 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Rrm2P11157 390 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Zfp37P17141 594 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Rab12P35283 243 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Rab23P35288 237 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 CkbQ04447 381 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 PrlrQ08501 608 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Bpifa6Q0VGU8 367 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Pdss2Q33DR3 401 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Q3UK37 420 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Sel1l2Q3V172 688 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Arhgef15Q5FWH6 849 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Snx31Q6P8Y7 439 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Znf513Q6PD29 541 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Olig3Q6PFG8 273 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Sdr16c5Q7TQA3 309 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Thnsl2Q80W22 483 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Rmnd5aQ80YQ8 391 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Itln1bQ80ZA0 313 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Scn3bQ8BHK2 215 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 AcppQ8CE08 381 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Sf3b4Q8QZY9 424 aaKnown RBP11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Olfr1208Q8VG47 308 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 RragcQ99K70 398 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 PglsQ9CQ60 257 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ndufb5Q9CQH3 189 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 NwcQ9CQI4 244 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Uba7Q9DBK7 977 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Trip4Q9QXN3 581 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Asb4Q9WV71 426 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Plxna4Q80UG2 1893 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Gm21885A0A286YDN8 145 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Gm14781A2A9Q9 366 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Vmn2r85G3UW56 850 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Vmn1r25H3BLP0 302 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms