RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 PANK4Q9NVE7 773 aa2.77□□□□□ -1.97
SRP54-214ENST00000630962 HAO2Q9NYQ3 351 aa2.77□□□□□ -1.97
SRP54-214ENST00000630962 ANAPC2Q9UJX6 822 aa2.77□□□□□ -1.97
SRP54-214ENST00000630962 ELF5Q9UKW6 265 aaPredicted RBP2.77□□□□□ -1.97
SRP54-214ENST00000630962 PPP2R2CQ9Y2T4 447 aa2.77□□□□□ -1.97
SRP54-214ENST00000630962 IL16Q14005 1332 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 EDDM13A0A1B0GTR0 161 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 FEZF1A0PJY2 475 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 MEX3AA1L020 520 aaKnown RBP2.76□□□□□ -1.97
SRP54-214ENST00000630962 C2CD4DB7Z1M9 353 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 K7ENM7 598 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 CLDN4O14493 209 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 SNX3O60493 162 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 IGHV3-13P01766 116 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 DARSP14868 501 aaKnown RBP2.76□□□□□ -1.97
SRP54-214ENST00000630962 EPCAMP16422 314 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 PTPN3P26045 913 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 ELAVL4P26378 380 aaKnown RBP2.76□□□□□ -1.97
SRP54-214ENST00000630962 CSRP3P50461 194 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 CCR3P51677 355 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 CSE1LP55060 971 aaKnown RBP2.76□□□□□ -1.97
SRP54-214ENST00000630962 NPTX1Q15818 432 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 HIGD2BQ4VC39 106 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 SLC25A53Q5H9E4 307 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 FGD3Q5JSP0 725 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 C9orf152Q5JTZ5 239 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 Q6ZRP5 223 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 CAMKMTQ7Z624 323 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 ZFAND4Q86XD8 727 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 ZNF595Q8IYB9 648 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 RASGEF1AQ8N9B8 481 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 POGLUT1Q8NBL1 392 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 METTL21AQ8WXB1 218 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 OMA1Q96E52 524 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 FAM71F1Q96KD3 344 aaPredicted RBP2.76□□□□□ -1.97
SRP54-214ENST00000630962 NECTIN4Q96NY8 510 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 MAP3K3Q99759 626 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 NUDT16L1Q9BRJ7 211 aaKnown RBP2.76□□□□□ -1.97
SRP54-214ENST00000630962 RPP25Q9BUL9 199 aaKnown RBP2.76□□□□□ -1.97
SRP54-214ENST00000630962 RAB11FIP5Q9BXF6 653 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 SHARPINQ9H0F6 387 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 GSN-AS1Q9NRJ2 163 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 OLAHQ9NV23 265 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 PRMT7Q9NVM4 692 aaPredicted RBP2.76□□□□□ -1.97
SRP54-214ENST00000630962 TXNDC16Q9P2K2 825 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 LNPEPQ9UIQ6 1025 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 RPS6KA6Q9UK32 745 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 PRDM4Q9UKN5 801 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 PCDHGB4Q9UN71 923 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 ANGPTL3Q9Y5C1 460 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 R4GN57 208 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 PCNX3Q9H6A9 2034 aa2.76□□□□□ -1.97
SRP54-214ENST00000630962 TP53BP1Q12888 1972 aaPredicted RBP2.76□□□□□ -1.97
SRP54-214ENST00000630962 A0A087WUV0 522 aaPredicted RBP2.75□□□□□ -1.97
SRP54-214ENST00000630962 TRAV24A0A0B4J272 114 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 IGKV6D-41A0A0C4DH26 115 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 EPM2AB3EWF7 344 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 RPS6KA5O75582 802 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 THEGLP0DJG4 465 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 AADACP22760 399 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 RBMS1P29558 406 aaKnown RBP2.75□□□□□ -1.97
SRP54-214ENST00000630962 CAPGP40121 348 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 DNA2P51530 1060 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 KRTAP10-3P60369 221 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 CSNK2BP67870 215 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 IRX4P78413 519 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 CDH18Q13634 790 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 ALCAMQ13740 583 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 SNTB1Q13884 538 aaKnown RBP2.75□□□□□ -1.97
SRP54-214ENST00000630962 VEZF1Q14119 521 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 LY6DQ14210 128 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 XKR3Q5GH77 459 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 TCTEX1D4Q5JR98 221 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 LCLAT1Q6UWP7 414 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 SLC39A11Q8N1S5 342 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 TC2NQ8N9U0 490 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 Q8NBF4 154 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 NPRL2Q8WTW4 380 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 PRICKLE1Q96MT3 831 aaPredicted RBP2.75□□□□□ -1.97
SRP54-214ENST00000630962 LRRC3BQ96PB8 259 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 FEVQ99581 238 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 CDCA3Q99618 268 aaPredicted RBP2.75□□□□□ -1.97
SRP54-214ENST00000630962 Q9H8V8 135 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 MYNNQ9NPC7 610 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 RPS10P5Q9NQ39 176 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 TMED3Q9Y3Q3 217 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 RPS6KL1Q9Y6S9 549 aa2.75□□□□□ -1.97
SRP54-214ENST00000630962 TDRD15B5MCY1 1934 aaKnown RBP2.74□□□□□ -1.97
SRP54-214ENST00000630962 A0A1W2PR80 420 aa2.74□□□□□ -1.97
SRP54-214ENST00000630962 SERINC4A6NH21 518 aa2.74□□□□□ -1.97
SRP54-214ENST00000630962 SLC1A7O00341 560 aa2.74□□□□□ -1.97
SRP54-214ENST00000630962 TRAFD1O14545 582 aaPredicted RBP2.74□□□□□ -1.97
SRP54-214ENST00000630962 PTGESO14684 152 aa2.74□□□□□ -1.97
SRP54-214ENST00000630962 SRSF10O75494 262 aaKnown RBP2.74□□□□□ -1.97
SRP54-214ENST00000630962 STARD3NLO95772 234 aa2.74□□□□□ -1.97
SRP54-214ENST00000630962 KRT2P35908 639 aa2.74□□□□□ -1.97
SRP54-214ENST00000630962 HSD17B3P37058 310 aa2.74□□□□□ -1.97
SRP54-214ENST00000630962 RAB28P51157 221 aa2.74□□□□□ -1.97
SRP54-214ENST00000630962 GCNT1Q02742 428 aa2.74□□□□□ -1.97
SRP54-214ENST00000630962 PAX8Q06710 450 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms