RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 PRRG4Q9BZD6 226 aa2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 EVA1AQ9H8M9 152 aa2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 GRPEL1Q9HAV7 217 aa2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ZBTB20Q9HC78 741 aaPredicted RBP2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CD209Q9NNX6 404 aa2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TCF7L2Q9NQB0 619 aa2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 GKN1Q9NS71 199 aa2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TMEM30AQ9NV96 361 aa2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CRNNQ9UBG3 495 aaPredicted RBP2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 GTF3C4Q9UKN8 822 aa2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SLC7A7Q9UM01 511 aa2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 C5orf42Q9H799 3197 aa2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 DDX60Q8IY21 1712 aaKnown RBP2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CKAP5Q14008 2032 aa2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 COL4A5P29400 1685 aa2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 NCOR1O75376 2440 aa2.47□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ASTN2O75129 1339 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CCDC88AQ3V6T2 1871 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 IGLV5-45A0A087WSX0 123 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 A0A1W2PP11 408 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 HTR3EA5X5Y0 456 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 KBTBD13C9JR72 458 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 C16orf97H3BN30 126 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PLK4O00444 970 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 IFIT3O14879 490 aaKnown RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PLPP2O43688 288 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SYNCRIPO60506 623 aaKnown RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FRAT2O75474 233 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PAPSS2O95340 614 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MOCS3O95396 460 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 BAG2O95816 211 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TFAP2AP05549 437 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 KRT19P08727 400 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CDH1P12830 882 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CKMT2P17540 419 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 AMD1P17707 334 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GM2AP17900 193 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 EIF2S2P20042 333 aaKnown RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CDC25CP30307 473 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 HERV-K104P61576 105 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 KRT83P78385 493 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 KCNJ10P78508 379 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RELQ04864 619 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RBPJQ06330 500 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SPOCK1Q08629 439 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CAMK2DQ13557 499 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SCARB2Q14108 478 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CCDC6Q16204 474 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 UGCGQ16739 394 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PHKG1Q16816 387 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 HYAL4Q2M3T9 481 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CCDC57Q2TAC2 916 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FAM174BQ3ZCQ3 159 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FUT11Q495W5 492 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SIRPB2Q5JXA9 342 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 C6orf163Q5TEZ5 329 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ALS2CLQ60I27 953 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CAPRIN2Q6IMN6 1127 aaKnown RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PRR27Q6MZM9 219 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MFSD12Q6NUT3 480 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PSRC1Q6PGN9 363 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 IL27RAQ6UWB1 636 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GDPD4Q6W3E5 623 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZBTB49Q6ZSB9 765 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ASB18Q6ZVZ8 466 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TMPRSS11FQ6ZWK6 438 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MOB2Q70IA6 237 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CCDC91Q7Z6B0 441 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZNF554Q86TJ5 538 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TLK2Q86UE8 772 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 AMIGO1Q86WK6 493 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PTOV1Q86YD1 416 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CEP97Q8IW35 865 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 OR8H3Q8N146 312 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PELI3Q8N2H9 469 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 NKAIN3Q8N8D7 197 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PI4KAP1Q8N8J0 262 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 DMBX1Q8NFW5 382 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 OR52I2Q8NH67 350 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 LILRB1Q8NHL6 650 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FAM151AQ8WW52 585 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SLC44A1Q8WWI5 657 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 NR4A3Q92570 626 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SECISBP2LQ93073 1101 aaKnown RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ABTB1Q969K4 478 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 NXNL1Q96CM4 212 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SPDL1Q96EA4 605 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 LINGO1Q96FE5 620 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 VMP1Q96GC9 406 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZNF479Q96JC4 524 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CCDC114Q96M63 670 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZNF582Q96NG8 517 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GUCD1Q96NT3 240 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CAMK1GQ96NX5 476 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 LRRC3BQ96PB8 259 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SLC22A12Q96S37 553 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CSF3RQ99062 836 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MGME1Q9BQP7 344 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 NAA11Q9BSU3 229 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 UPF3BQ9BZI7 483 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms