RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 EedQ921E6 441 aaKnown RBP10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Prdm5Q9CXE0 599 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Capns2Q9D7J7 247 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm13040A2A8C4 496 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Mgat4eA6H684 439 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Prpmp5E9PXN1 296 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm4775F7ANJ3 135 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Rhox6O70238 227 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 BckdhaP50136 442 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Lhx3P50481 400 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Kcnh6Q32ME0 950 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Smu1Q3UKJ7 513 aaKnown RBP10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Pydc3Q3V3Q4 588 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 TCAIMQ66JZ4 499 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Zmiz1Q6P1E1 1072 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Dppa4Q8CCG4 296 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Olfr677Q8VF06 312 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 NwcQ9CQI4 244 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 DenrQ9CQJ6 198 aaKnown RBP10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 4930503E14RikQ9D583 177 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Wdr54Q9R0D8 334 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Psmd13Q9WVJ2 376 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Cldn7Q9Z261 211 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ccdc88aQ5SNZ0 1873 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Itga10E9Q6R1 1167 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Vmn2r10K7N621 847 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Dnajb5O89114 348 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 CyctP00015 105 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tacr2P30549 384 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Nfatc2Q60591 927 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Znf280cQ6P3Y5 742 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Baiap2Q8BKX1 535 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ttc34Q8C0Q3 554 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Pdcd2lQ8C5N5 364 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Mfsd6Q8CBH5 775 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Pih1d2Q8CHR9 315 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Znf668Q8K2R5 619 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Apbb3Q8R1C9 486 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tcf25Q8R3L2 676 aaKnown RBP10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Akr1d1Q8VCX1 325 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Olfr1484Q8VEU6 315 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 GneQ91WG8 722 aaKnown RBP10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Dio3Q91ZI8 304 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 PclafQ9CQX4 110 aaKnown RBP10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ttc25Q9D4B2 624 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Spesp1Q9D5A0 399 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Necab3Q9D6J4 353 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tnfrsf21Q9EPU5 655 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Nrip2Q9JHR9 270 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Sars2Q9JJL8 518 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 DstnQ9R0P5 165 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 9230113P08RikD3YWX3 137 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Dcpp2E9PYC2 171 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Vmn2r65G3X931 845 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Dcpp1L7N1X9 171 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 B3galt2O54905 422 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Hoxb6P09023 224 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 CryaaP24622 196 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Cdh4P39038 913 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Kcnj12P52187 427 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 ChatQ03059 641 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Obox3Q3UT54 335 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Rasgrp3Q6NZH9 691 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Rslcan18Q7M6X5 460 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Zbtb24Q80X44 710 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 PdhxQ8BKZ9 501 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Vmn1r205Q8R276 316 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Hbp1Q8R316 516 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Sec16bQ91XT4 1051 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Hspb11Q9D6H2 143 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm33543A0A1B0GSI5 81 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Wfdc16A2A5H4 111 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Bard1O70445 765 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Sh3pxd2aO89032 1124 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Fam98aQ3TJZ6 515 aaKnown RBP10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Nxf3Q4ZGD9 553 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gpr62Q80UC6 358 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ugt2b35Q8BJL9 529 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gk5Q8BX05 534 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Piwil2Q8CDG1 971 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 LctlQ8K1F9 566 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Cant1Q8VCF1 403 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm26657Q9CVR1 127 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 SgshQ9EQ08 502 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Rcan2Q9JHG2 197 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Elovl2Q9JLJ4 292 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tinf2Q9QXG9 341 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Otud4B2RRE7 1107 aaKnown RBP10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Spata6lB2RV46 347 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Zfp105G3X9I0 524 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Npc1O35604 1277 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 SpibO35906 267 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Klf10O89091 479 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Arhgap39P59281 1107 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Cntn5P68500 1098 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Stx4P70452 298 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Lrrc74bQ14BP6 391 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Teddm2Q208S0 260 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Mansc4Q3UU94 337 aa10.04□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Xkr4Q5GH67 647 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms