Protein–RNA interactions for Protein: Q8R1C9

Apbb3, Amyloid-beta A4 precursor protein-binding family B member 3, mousemouse

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apbb3Q8R1C9 Gm25239-201ENSMUST00000174915 86 ntBASIC38.96■■■■□ 3.83
Apbb3Q8R1C9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
Apbb3Q8R1C9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
Apbb3Q8R1C9 Gm24109-201ENSMUST00000175489 103 ntBASIC33.86■■■■□ 3.01
Apbb3Q8R1C9 Gm15042-201ENSMUST00000120212 883 ntBASIC33.85■■■■□ 3.01
Apbb3Q8R1C9 Gm15045-201ENSMUST00000117359 883 ntBASIC33.02■■■□□ 2.88
Apbb3Q8R1C9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Apbb3Q8R1C9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
Apbb3Q8R1C9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Apbb3Q8R1C9 Gm23366-201ENSMUST00000175022 89 ntBASIC32.55■■■□□ 2.8
Apbb3Q8R1C9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Apbb3Q8R1C9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Apbb3Q8R1C9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Apbb3Q8R1C9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.65■■■□□ 2.66
Apbb3Q8R1C9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Apbb3Q8R1C9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.38■■■□□ 2.61
Apbb3Q8R1C9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.38■■■□□ 2.61
Apbb3Q8R1C9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Apbb3Q8R1C9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Apbb3Q8R1C9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Apbb3Q8R1C9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Apbb3Q8R1C9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Apbb3Q8R1C9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Apbb3Q8R1C9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Apbb3Q8R1C9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.89■■■□□ 2.54
Apbb3Q8R1C9 Gm25238-201ENSMUST00000174914 89 ntBASIC30.8■■■□□ 2.52
Apbb3Q8R1C9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.69■■■□□ 2.5
Apbb3Q8R1C9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Apbb3Q8R1C9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Apbb3Q8R1C9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Apbb3Q8R1C9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
Apbb3Q8R1C9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Apbb3Q8R1C9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
Apbb3Q8R1C9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.14■■■□□ 2.41
Apbb3Q8R1C9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Apbb3Q8R1C9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Apbb3Q8R1C9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.94■■■□□ 2.38
Apbb3Q8R1C9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
Apbb3Q8R1C9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Apbb3Q8R1C9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.86■■■□□ 2.37
Apbb3Q8R1C9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Apbb3Q8R1C9 Psd-208ENSMUST00000224556 2034 ntBASIC29.74■■■□□ 2.35
Apbb3Q8R1C9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Apbb3Q8R1C9 Gm25262-201ENSMUST00000174934 133 ntBASIC29.68■■■□□ 2.34
Apbb3Q8R1C9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.62■■■□□ 2.33
Apbb3Q8R1C9 Gm27325-201ENSMUST00000175467 74 ntBASIC29.6■■■□□ 2.33
Apbb3Q8R1C9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.49■■■□□ 2.31
Apbb3Q8R1C9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Apbb3Q8R1C9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Apbb3Q8R1C9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.24■■■□□ 2.27
Apbb3Q8R1C9 Rab21-202ENSMUST00000218831 843 ntBASIC29.24■■■□□ 2.27
Apbb3Q8R1C9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.19■■■□□ 2.26
Apbb3Q8R1C9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.15■■■□□ 2.26
Apbb3Q8R1C9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Apbb3Q8R1C9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Apbb3Q8R1C9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Apbb3Q8R1C9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
Apbb3Q8R1C9 Gm26115-201ENSMUST00000175605 87 ntBASIC29.03■■■□□ 2.24
Apbb3Q8R1C9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.02■■■□□ 2.24
Apbb3Q8R1C9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Apbb3Q8R1C9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.97■■■□□ 2.23
Apbb3Q8R1C9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Apbb3Q8R1C9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Apbb3Q8R1C9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Apbb3Q8R1C9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.84■■■□□ 2.21
Apbb3Q8R1C9 Gm8109-201ENSMUST00000194076 746 ntBASIC28.81■■■□□ 2.2
Apbb3Q8R1C9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Apbb3Q8R1C9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
Apbb3Q8R1C9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.78■■■□□ 2.2
Apbb3Q8R1C9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Apbb3Q8R1C9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.72■■■□□ 2.19
Apbb3Q8R1C9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.64■■■□□ 2.18
Apbb3Q8R1C9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Apbb3Q8R1C9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Apbb3Q8R1C9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.59■■■□□ 2.17
Apbb3Q8R1C9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.56■■■□□ 2.16
Apbb3Q8R1C9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Apbb3Q8R1C9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Apbb3Q8R1C9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Apbb3Q8R1C9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Apbb3Q8R1C9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Apbb3Q8R1C9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Apbb3Q8R1C9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Apbb3Q8R1C9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Apbb3Q8R1C9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Apbb3Q8R1C9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Apbb3Q8R1C9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.26■■■□□ 2.11
Apbb3Q8R1C9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Apbb3Q8R1C9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.23■■■□□ 2.11
Apbb3Q8R1C9 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.21■■■□□ 2.11
Apbb3Q8R1C9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
Apbb3Q8R1C9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.11■■■□□ 2.09
Apbb3Q8R1C9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Apbb3Q8R1C9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Apbb3Q8R1C9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Apbb3Q8R1C9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Apbb3Q8R1C9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Apbb3Q8R1C9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
Apbb3Q8R1C9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28■■■□□ 2.07
Apbb3Q8R1C9 Gm27322-201ENSMUST00000184007 104 ntBASIC27.99■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 365.3 ms