Protein–RNA interactions for Protein: Q9D6J4

Necab3, N-terminal EF-hand calcium-binding protein 3, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Necab3Q9D6J4 Gm25239-201ENSMUST00000174915 86 ntBASIC39.78■■■■□ 3.96
Necab3Q9D6J4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
Necab3Q9D6J4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Necab3Q9D6J4 Gm15042-201ENSMUST00000120212 883 ntBASIC34.71■■■■□ 3.15
Necab3Q9D6J4 Gm24109-201ENSMUST00000175489 103 ntBASIC34.46■■■■□ 3.11
Necab3Q9D6J4 Gm15045-201ENSMUST00000117359 883 ntBASIC33.91■■■■□ 3.02
Necab3Q9D6J4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Necab3Q9D6J4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Necab3Q9D6J4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Necab3Q9D6J4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
Necab3Q9D6J4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Necab3Q9D6J4 Gm23366-201ENSMUST00000175022 89 ntBASIC33.23■■■□□ 2.91
Necab3Q9D6J4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Necab3Q9D6J4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.74■■■□□ 2.83
Necab3Q9D6J4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Necab3Q9D6J4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.18■■■□□ 2.74
Necab3Q9D6J4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Necab3Q9D6J4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
Necab3Q9D6J4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.97■■■□□ 2.71
Necab3Q9D6J4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Necab3Q9D6J4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.95■■■□□ 2.71
Necab3Q9D6J4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.84■■■□□ 2.69
Necab3Q9D6J4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Necab3Q9D6J4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Necab3Q9D6J4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Necab3Q9D6J4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Necab3Q9D6J4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Necab3Q9D6J4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
Necab3Q9D6J4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Necab3Q9D6J4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.43■■■□□ 2.62
Necab3Q9D6J4 Gm25238-201ENSMUST00000174914 89 ntBASIC31.42■■■□□ 2.62
Necab3Q9D6J4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Necab3Q9D6J4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Necab3Q9D6J4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.31■■■□□ 2.6
Necab3Q9D6J4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Necab3Q9D6J4 Psd-208ENSMUST00000224556 2034 ntBASIC31.02■■■□□ 2.56
Necab3Q9D6J4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Necab3Q9D6J4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
Necab3Q9D6J4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.73■■■□□ 2.51
Necab3Q9D6J4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Necab3Q9D6J4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.62■■■□□ 2.49
Necab3Q9D6J4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Necab3Q9D6J4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.45■■■□□ 2.47
Necab3Q9D6J4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
Necab3Q9D6J4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Necab3Q9D6J4 Gm27325-201ENSMUST00000175467 74 ntBASIC30.41■■■□□ 2.46
Necab3Q9D6J4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Necab3Q9D6J4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Necab3Q9D6J4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.28■■■□□ 2.44
Necab3Q9D6J4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Necab3Q9D6J4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.15■■■□□ 2.42
Necab3Q9D6J4 Gm25262-201ENSMUST00000174934 133 ntBASIC30.15■■■□□ 2.42
Necab3Q9D6J4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Necab3Q9D6J4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.95■■■□□ 2.38
Necab3Q9D6J4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Necab3Q9D6J4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.93■■■□□ 2.38
Necab3Q9D6J4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Necab3Q9D6J4 Rab21-202ENSMUST00000218831 843 ntBASIC29.9■■■□□ 2.38
Necab3Q9D6J4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Necab3Q9D6J4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.82■■■□□ 2.36
Necab3Q9D6J4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Necab3Q9D6J4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Necab3Q9D6J4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Necab3Q9D6J4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.64■■■□□ 2.34
Necab3Q9D6J4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.63■■■□□ 2.33
Necab3Q9D6J4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Necab3Q9D6J4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Necab3Q9D6J4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.54■■■□□ 2.32
Necab3Q9D6J4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.52■■■□□ 2.32
Necab3Q9D6J4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.32
Necab3Q9D6J4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Necab3Q9D6J4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.46■■■□□ 2.31
Necab3Q9D6J4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Necab3Q9D6J4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
Necab3Q9D6J4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Necab3Q9D6J4 Gm26115-201ENSMUST00000175605 87 ntBASIC29.41■■■□□ 2.3
Necab3Q9D6J4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Necab3Q9D6J4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.29
Necab3Q9D6J4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Necab3Q9D6J4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Necab3Q9D6J4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Necab3Q9D6J4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Necab3Q9D6J4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Necab3Q9D6J4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Necab3Q9D6J4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Necab3Q9D6J4 Gm8109-201ENSMUST00000194076 746 ntBASIC29.22■■■□□ 2.27
Necab3Q9D6J4 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.22■■■□□ 2.27
Necab3Q9D6J4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Necab3Q9D6J4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Necab3Q9D6J4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.15■■■□□ 2.26
Necab3Q9D6J4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Necab3Q9D6J4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.13■■■□□ 2.25
Necab3Q9D6J4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Necab3Q9D6J4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.07■■■□□ 2.24
Necab3Q9D6J4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Necab3Q9D6J4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.01■■■□□ 2.23
Necab3Q9D6J4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.99■■■□□ 2.23
Necab3Q9D6J4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Necab3Q9D6J4 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.96■■■□□ 2.23
Necab3Q9D6J4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms