RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ZNF782Q6ZMW2 699 aaPredicted RBP8.22□□□□□ -1.09
SCN9A-203ENST00000409672 CNEP1R1Q8N9A8 125 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 MCFD2Q8NI22 146 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 CIB1Q99828 191 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 C14orf105Q9NVL8 296 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 TUBG1P23258 451 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 RGS19P49795 217 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 CLCQ05315 142 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 DMWDQ09019 674 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF234Q14588 700 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 FASTKD3Q14CZ7 662 aaKnown RBP8.22□□□□□ -1.09
SCN9A-203ENST00000409672 LYSMD3Q7Z3D4 306 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 LRRC52Q8N7C0 313 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 LRRC20Q8TCA0 184 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 CMKLR1Q99788 373 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 TRPV5Q9NQA5 729 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 HIF3AQ9Y2N7 669 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 YJEFN3A6XGL0 299 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 E7ENQ6 273 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 BCKDKO14874 412 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 BRINP1O60477 761 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 OPN1LWP04000 364 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 ADRA1BP35368 520 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 ACVRL1P37023 503 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 BST1Q10588 318 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 PRAMEF13Q5VWM6 474 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 QSOX2Q6ZRP7 698 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF548Q8NEK5 533 aaPredicted RBP8.21□□□□□ -1.09
SCN9A-203ENST00000409672 THRSPQ92748 146 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 DIRAS2Q96HU8 199 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 CHCHD6Q9BRQ6 235 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 GABBR2O75899 941 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF35P13682 527 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 ABOP16442 354 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 FBLP22087 321 aaKnown RBP8.21□□□□□ -1.09
SCN9A-203ENST00000409672 KHKP50053 298 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 RAB28P51157 221 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 ATP6V0D1P61421 351 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 FAM174BQ3ZCQ3 159 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 PDE12Q6L8Q7 609 aaKnown RBP8.21□□□□□ -1.09
SCN9A-203ENST00000409672 LRMDAQ9H2I8 198 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 ACAD8Q9UKU7 415 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 OR1A2Q9Y585 309 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 MYO18AQ92614 2054 aaKnown RBP8.21□□□□□ -1.09
SCN9A-203ENST00000409672 GP1BBP13224 206 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 GRPRP30550 384 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 IRF9Q00978 393 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 TMED4Q7Z7H5 227 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 REM2Q8IYK8 340 aaPredicted RBP8.21□□□□□ -1.09
SCN9A-203ENST00000409672 TEX19Q8NA77 164 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 TBC1D15Q8TC07 691 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 SLC38A4Q969I6 547 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 ZBED6CLQ96FA7 236 aaPredicted RBP8.21□□□□□ -1.09
SCN9A-203ENST00000409672 SLC35A5Q9BS91 424 aa8.21□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF395Q9H8N7 513 aaPredicted RBP8.21□□□□□ -1.09
SCN9A-203ENST00000409672 GPN1Q9HCN4 374 aaPredicted RBP8.21□□□□□ -1.09
SCN9A-203ENST00000409672 DAPL1A0PJW8 107 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 APOC1P02654 83 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 OLR1P78380 273 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 COL1A2P08123 1366 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 ATRNL1Q5VV63 1379 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.21□□□□□ -1.1
SCN9A-203ENST00000409672 A0A1W2PPK0 400 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 ELOVL7A1L3X0 281 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 MAGEB17A8MXT2 336 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 J3KR12 359 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 IFNW1P05000 195 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 LY6G5CQ5SRR4 150 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.21□□□□□ -1.1
SCN9A-203ENST00000409672 OR5T1Q8NG75 326 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 IRF7Q92985 503 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 TCEAL3Q969E4 200 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 COMMD3Q9UBI1 195 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 RAP2CQ9Y3L5 183 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 COMMD3-BMI1R4GMX3 469 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 NWD1Q149M9 1564 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 POP7O75817 140 aaKnown RBP8.21□□□□□ -1.1
SCN9A-203ENST00000409672 ERCC1P07992 297 aaPredicted RBP8.21□□□□□ -1.1
SCN9A-203ENST00000409672 HNF1BP35680 557 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 HNRNPKP61978 463 aaKnown RBP eCLIP8.21□□□□□ -1.1
SCN9A-203ENST00000409672 OLIG2Q13516 323 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 NTRK3Q16288 839 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 PDSS1Q5T2R2 415 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 REP15Q6BDI9 236 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 USP30Q70CQ3 517 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 PIM3Q86V86 326 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 AMER2Q8N7J2 671 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 RGMAQ96B86 450 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 HERC2P3Q9BVR0 1158 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 LYARQ9NX58 379 aaKnown RBP8.21□□□□□ -1.1
SCN9A-203ENST00000409672 TELO2Q9Y4R8 837 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 PGRP06401 933 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 RHOQP17081 205 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 GGT5P36269 586 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 ADARP55265 1226 aaKnown RBP8.21□□□□□ -1.1
SCN9A-203ENST00000409672 PTPRCAPQ14761 206 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 GTF2IRD2BQ6EKJ0 949 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 ADNP2Q6IQ32 1131 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 GTF2IRD2Q86UP8 949 aa8.21□□□□□ -1.1
SCN9A-203ENST00000409672 SDR16C5Q8N3Y7 309 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms