RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Prpf18Q8BM39 342 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Znf451Q8C0P7 1056 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Pih1d2Q8CHR9 315 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Sgip1Q8VD37 806 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Emid1Q91VF5 444 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Far1Q922J9 515 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Gemin6Q9CX53 166 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Q9D937 123 aaKnown RBP17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Smg9Q9DB90 520 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Igkv12-98A0A0G2JGF9 115 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Btnl6A2CG22 539 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Kpna4O35343 521 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Clk3O35492 638 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Npc1O35604 1277 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Orm2P07361 207 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Ccr7P47774 378 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Arhgap39P59281 1107 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Zdhhc11Q14AK4 347 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 HecaQ3V1N5 544 aaKnown RBP17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Vsx2Q61412 361 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Il20raQ6PHB0 546 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Gpr171Q8BG55 319 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Sit1Q8C503 180 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Zc2hc1cQ8CCG1 527 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Adnp2Q8CHC8 1165 aaKnown RBP17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Med17Q8VCD5 649 aaKnown RBP17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Retreg1dQ8VE91 480 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Socs7Q8VHQ2 579 aa17.9■□□□□ 0.46
Ccdc3-201ENSMUST00000027988 Fam46dB1ATX6 390 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Gm16494E9Q2Z4 87 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Cyp8b1O88962 500 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Hoxd8P23463 289 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Smim24Q0VG18 120 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Q5EBG8 199 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Cpa6Q5U901 438 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Pcdh8Q7TSK3 1070 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Rcn3Q8BH97 328 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Ptgr2Q8VDQ1 351 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 MmadhcQ99LS1 296 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Mrpl9Q99N94 265 aaKnown RBP17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Riok2Q9CQS5 547 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 GrifinQ9D1U0 144 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Olfr1253A2AUA2 318 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Rhox2hK7N6P1 191 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Htr1bP28334 386 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Akt1P31750 480 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Tead2P48301 445 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Entpd1P55772 510 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 SgcdP82347 289 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 VldlrP98156 873 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Lrfn1Q2WF71 766 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 InipQ3TXT3 104 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Olfr1364Q5SZS9 314 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 BadQ61337 204 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Bcl2l1Q64373 233 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Ints6Q6PCM2 883 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Olfr1251Q7TQZ3 318 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Npas4Q8BGD7 802 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Phf11aQ8BVM9 293 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Ca12Q8CI85 354 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Utp4Q8R2N2 686 aaKnown RBP17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Olfr1047Q8VGS0 319 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Mto1Q923Z3 669 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 CtsrQ9JIA9 334 aa17.89■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Tp53bp1P70399 1969 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Ifi213D3Z5G0 586 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Slc16a8O35308 492 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Slc1a5P51912 553 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 InhbbQ04999 411 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Dmrtc1bQ2PMX6 267 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Pcgf5Q3UK78 256 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Dsg1bQ7TSF1 1060 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Fut11Q8BHC9 489 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Rbm45Q8BHN5 476 aaKnown RBP17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Recql5Q8VID5 982 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Chil4Q91Z98 402 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 SardhQ99LB7 919 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 D10Jhu81eQ9D172 266 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Apbb2Q9DBR4 760 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Gm13285B1AYI3 182 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Gm13275B1AYI8 182 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Gm19965J3QNY8 723 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Kcnk1O08581 336 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Ppm1aP49443 382 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Vipr1P97751 459 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Kcnh6Q32ME0 950 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 RogdiQ3TDK6 287 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Lemd2Q6DVA0 511 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Q6PAC4 1279 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Hamp2Q80T19 83 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 ToporsQ80Z37 1033 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Rap2aQ80ZJ1 183 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 PgghgQ8BP56 690 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 IfnzQ8BQT1 182 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Nuak2Q8BZN4 639 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Fam110bQ8C739 366 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Gm13278Q8CD73 182 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Vmn1r81Q8R286 306 aa17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Ndufs1Q91VD9 727 aaKnown RBP17.88■□□□□ 0.45
Ccdc3-201ENSMUST00000027988 Klk6Q91Y82 253 aa17.88■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms