Protein–RNA interactions for Protein: Q8BVM9

Phf11a, PHD finger protein 11A, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11aQ8BVM9 Gm25239-201ENSMUST00000174915 86 ntBASIC32.6■■■□□ 2.81
Phf11aQ8BVM9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Phf11aQ8BVM9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Phf11aQ8BVM9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
Phf11aQ8BVM9 Psd-208ENSMUST00000224556 2034 ntBASIC30.1■■■□□ 2.41
Phf11aQ8BVM9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Phf11aQ8BVM9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Phf11aQ8BVM9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Phf11aQ8BVM9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Phf11aQ8BVM9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Phf11aQ8BVM9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Phf11aQ8BVM9 Gm15042-201ENSMUST00000120212 883 ntBASIC29.18■■■□□ 2.26
Phf11aQ8BVM9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Phf11aQ8BVM9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.78■■■□□ 2.2
Phf11aQ8BVM9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Phf11aQ8BVM9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Phf11aQ8BVM9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Phf11aQ8BVM9 Gm15045-201ENSMUST00000117359 883 ntBASIC28.69■■■□□ 2.18
Phf11aQ8BVM9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Phf11aQ8BVM9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Phf11aQ8BVM9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Phf11aQ8BVM9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Phf11aQ8BVM9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Phf11aQ8BVM9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Phf11aQ8BVM9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Phf11aQ8BVM9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Phf11aQ8BVM9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
Phf11aQ8BVM9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Phf11aQ8BVM9 Gm24109-201ENSMUST00000175489 103 ntBASIC27.93■■■□□ 2.06
Phf11aQ8BVM9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.87■■■□□ 2.05
Phf11aQ8BVM9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Phf11aQ8BVM9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
Phf11aQ8BVM9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Phf11aQ8BVM9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.69■■■□□ 2.02
Phf11aQ8BVM9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Phf11aQ8BVM9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Phf11aQ8BVM9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.54■■■□□ 2
Phf11aQ8BVM9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.5■■□□□ 1.99
Phf11aQ8BVM9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Phf11aQ8BVM9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Phf11aQ8BVM9 Gm23366-201ENSMUST00000175022 89 ntBASIC27.27■■□□□ 1.96
Phf11aQ8BVM9 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.24■■□□□ 1.95
Phf11aQ8BVM9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Phf11aQ8BVM9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Phf11aQ8BVM9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.15■■□□□ 1.94
Phf11aQ8BVM9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.14■■□□□ 1.94
Phf11aQ8BVM9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Phf11aQ8BVM9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Phf11aQ8BVM9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Phf11aQ8BVM9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Phf11aQ8BVM9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Phf11aQ8BVM9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Phf11aQ8BVM9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.86■■□□□ 1.89
Phf11aQ8BVM9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Phf11aQ8BVM9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Phf11aQ8BVM9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Phf11aQ8BVM9 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.69■■□□□ 1.86
Phf11aQ8BVM9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Phf11aQ8BVM9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Phf11aQ8BVM9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Phf11aQ8BVM9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Phf11aQ8BVM9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.57■■□□□ 1.84
Phf11aQ8BVM9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Phf11aQ8BVM9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Phf11aQ8BVM9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Phf11aQ8BVM9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Phf11aQ8BVM9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Phf11aQ8BVM9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Phf11aQ8BVM9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Phf11aQ8BVM9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Phf11aQ8BVM9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Phf11aQ8BVM9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Phf11aQ8BVM9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Phf11aQ8BVM9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Phf11aQ8BVM9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Phf11aQ8BVM9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.77
Phf11aQ8BVM9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Phf11aQ8BVM9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Phf11aQ8BVM9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
Phf11aQ8BVM9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Phf11aQ8BVM9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.89■■□□□ 1.74
Phf11aQ8BVM9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Phf11aQ8BVM9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Phf11aQ8BVM9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.83■■□□□ 1.73
Phf11aQ8BVM9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Phf11aQ8BVM9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Phf11aQ8BVM9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Phf11aQ8BVM9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Phf11aQ8BVM9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Phf11aQ8BVM9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Phf11aQ8BVM9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Phf11aQ8BVM9 Gm27325-201ENSMUST00000175467 74 ntBASIC25.7■■□□□ 1.7
Phf11aQ8BVM9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Phf11aQ8BVM9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Phf11aQ8BVM9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Phf11aQ8BVM9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Phf11aQ8BVM9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Phf11aQ8BVM9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Phf11aQ8BVM9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Phf11aQ8BVM9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms